G2103772


Basic Information

Item Value
gene id G2103772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 10482959 ~ 10486964 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2406285
CAAAAGATTGGAGCTTAGAAACAGTCAAATGAACAGACAAAGACCAAGCCAGTTTGAATTGCAATACATATTTACACTTTAATAAATAAACGTAATTGTTCTATTATACCAAAGAGAAGGCAGATTGTCCATATCTTGGGATGCAGATATCGCTGTGGTGACAAACATTCTCATTGAATATATCAGCATAACCGTCACAAAGCTCAGCGTCTAGGAGGAACAGAACTCTGTGATTAAACGCCAAGAAGGCAATACATAGAAAATATCATCCCTGGAGAATAGCTATGCTTTTGTATTTGTAAAAATTGAGGTATTGCACCACACAGTAAAAAGGGAGAATAGTAATGTAACATTTGGGGCTTCAGATTGTCCAGATTTTTACTgacaacccccaccccccccctcaAAGTACACAACATAATTATTCACCACACAAAAAAAGTACATTTAGGGCTTATGATCAATTCCTCTTTTTCCACACACATCCCTTCCCACTGTTTCAGttacacagacatacatacttttGGCGTAATAGTTTCTTTTTTGAAGTGGAAATAGTAACATGCACAGGGCTGCAGGGGCACGACACATCGTAGCACCTCAGCGAGTGCAGGATGTGGTGCAACAACTCCGGGAGATCATCCAATAGGAATGCTGAACAGGACTGATCTTCATGCTGGTCTACAGCTGTCCGCCTGTGCTTTGATAAACTCACTGTAGCGTCACCACTGATCCCCAGACTAGACTACACCATAGGAGCCTGGACAGACACAAACCTCTCACCAGGCAAAGGCAGCCAACGGTAGCTTGTTTAACACATATGGTAATAATACAATGTCTAAAAATCCTCTTATGGGGAAGGGTGGTGGCTTAATACAACAAATCCCCCCATCAGATGTTCATTGCCTCCAGCGATGGGAATCATGGGATAGGCGAGGCAGATGCCTCATGGCGTAATCATGCCCTAAAATACATCATCCCTCACATTGACATGAACACAGCCAGCTGGCCAGACAAGTGCACAGGGCCTGGTCCAATATTCCGGACTACACCCcagacagagcgagaggcagGGGGACACACCACCACATGCCTTCAACACGACAGGACGGGTTGGTCTCACTGAGAGGAGGGCCAAGTCATCGTAGCAGTATGGTTTTTAATCACACTGCTTTAGGAACAAAGTAGCACTATGGTCGTTCCACCTTAGGAAAAAAGTAGCACTATGGAACGACCAGATTTTACCTGGTCGTACCTAACATCTGAATTGGGCCTCACTTTCTTCAAACAATGATTTAGACATGAGGAATGGTCAAAAGCCAGGCACTGACCCCCCACACCAGTCCCAACCCAacaagtatatacagtgcctttggaaagtattcagaccccttgactttctccacattttgttaggttacagccttattctaaaattgatgaaacatttcccccctcaatctacacacaataccccataatgacaaagcaaaaaaaaatttGTGGTTGACATTTGTTAATTtctaacaaaaaaacagaaatattccacttacacaagtattcagaccatttactcaatactttgttgaagcacctttagcggtgattacagcctcaagtcttcttgggtatgacactacaagcttggcacacctgtatttgggaagcttctctcattcttctctgcagatgattttcagatctctccagagatggtcgatcgggttcaagtccaggctctggctgggccactcaaggatattcagagacttgtccagaaacaactcctgtattgtcttggctatgtgcttagggtcattgtcctgttggaaggtgatcatcaatgatgatcaatggaaacaggatgcaccggagctcaatttcaagtcttatagcaaagggtctgaatacttatgtaagttaTAAGTTGACAAATTTTCTTTCGcaactaaaaaaataaataatactgtTTTTGCTATTTCATtaaagggtattgtgtgtagatttatgaggattattaaaaatgtaatccattttagaataaggctgtaaccaaacaaaaacgtggaaaaagtcaaggggtctgaatactttccgaaggcactgtagtatCAGTTCTCTGTGACAGACAAGTAGTGTCAGGAACTCTTATCTATTACTaactacagaaacgatttcagaacaatctgagatggtgggtgtcatggcttgctgaaatgacatgtaACAACGCTAGGGTTAAAACTATCTCACCCAGAGGGTATAAGGGcactaagaacacacacacacctctcatttACACAGCCAGTGAGAAGTCTGCAGTTTGCCTCTGCTGTCCAGAGTCGGGCGCTGTCATCCAGGACATTGACTGTCCCCattcgtccacacacacacacactactgttgtTACTAAATTAGCAACTGTGGTTCAATCAAGTACACCTTATCTAAGAAGAAAGTTCAGCCTTGGGGTAAAAAGTGCTCAGTATGGGCATAACACCAGTACTATGGCCTGGGAAATGCCAACCACCTACTGTAGCTGCGGTAAAAGGCGCTAACACAGTGGGTTCAGCACCAACCAACATCATCCGCTTTTAACTCCACAATCAACTCACACCCACCATCCCTCTCCTGAAATGTATCATGGCGACAATAGAAAACCACCTACAATCACTACAGCAACCCCATCCACAAAATAAAGCCCTGCTTTCCAACATCGGGctataaaaaaaacaatgcatTGCAATATTTAAGCATGAACAGTTAACATTTTCAGAGCTGGGTTGTTTTTTTTATGGACAGAAACATTTATTCACTGGAACGTGAATCTCTGCCCAATATTGTTTTGCTGCATCATAAAAGATGACCTATCCCATATGGAAAAGTCCACATTAGGGGAAGAGGAATGCATggaacaacagaaacacacatttTCCTCGCCTCCTCGAGTTAAAAAGGACTTTCACGGGACTGTCAACCTGGTATGATATAATATCGATTTACCGTTTTTCTGGAGTGCAGCAGTTTATAGTTTGGGCTATGTTCACAGAGGAGTGGTGGCTGTCTATTCCAACGGTAGTTATAGTGGTCTGAGTTGAGCTCAAACGGACTGAACCAGCTCAAATGGACTGAACCAGGTCAAATGGACTGAACCAGGTCGAAGAGAAAAAAAAGTGGTCTGCGGTCGCATCCTTGTGGGGCTGTGTCTGGGTCTGTAAAATTAGGAGGCTTGCCTCTGGTATTTTTCATTGACATCCTTGTGGGGCTGTGTCTGGGTCAGTAAAATTAGGAGGCTTGCCTCTGGTATTTTTCATTGACATCCTTGTGGGGCTGTGTCTGGGTCAGTAAAATTAGGAGGCTTGCCTCTGGTATTTTTCATTGACATCCTTGTGGGGCTGTGTCTGGGTCAGTAAAATTAGGAGGCTTGCCTCTGGTATTTTTCATTGACATCCTTGTGGGGCTGTGTCTGGGTCAGTAAAATTAGGAGGCTTGCCTCTGGTATTTTTCATTGACATCCTTGTGGGGCTGTGTCTGGGTCAGTAAAATTAGGAGGCTTGCCTCTGGTATTTTTCATTGACATCCTTGTGGGGCTGTGTCTGGGTCTGTAAAATGAGGAGGCTTGCCTCTGGTATTTTTCATTGGCATCCTTGTGGGGCTGTGTCTGGGTCAGTAAAATTAGGAGGCTTGCCTCTGGTATTTTTCATTGACATCCTTGTGGGGCTGTGTCTGGGTCTGTAAAATTAGGAGGCTTGCCTCTGGTATTTTTCATTGCCGTAATATATTTGCTGCAATTATAGAAACATTGCAGTCtcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2406285 True 3813 lncRNA 0.43 2 10482959 10486964

Neighbor

gene id symbol gene type direction distance location
LOC110508497 LOC106600370 coding downstream 19129 10418527 ~ 10463830 (-)
LOC110508496 LOC106600349 coding downstream 68319 10387353 ~ 10414640 (-)
LOC110508492 LOC106600326 coding downstream 159875 10306711 ~ 10323084 (-)
LOC110508491 LOC106600322 coding downstream 176339 10301488 ~ 10306620 (-)
LOC110508490 LOC106600323 coding downstream 181591 10292011 ~ 10301368 (-)
LOC110508159 LOC106600382 coding upstream 17750 10504714 ~ 10508349 (-)
LOC110508501 LOC106600384 coding upstream 48062 10535026 ~ 10540345 (-)
LOC110508509 LOC106600390 coding upstream 190838 10677802 ~ 10681747 (-)
LOC110508508 LOC106600390 coding upstream 202219 10689183 ~ 10692245 (-)
LOC110508519 LOC106600402 coding upstream 358251 10845215 ~ 10852874 (-)
G2103736 NA non-coding downstream 85890 10396785 ~ 10397069 (-)
G2103735 NA non-coding downstream 96137 10386239 ~ 10386822 (-)
G2103696 LOC106600329 non-coding downstream 97481 10341581 ~ 10385478 (-)
G2103707 NA non-coding downstream 143894 10331660 ~ 10339065 (-)
G2103695 NA non-coding downstream 157660 10324958 ~ 10325299 (-)
G2103791 NA non-coding upstream 32255 10519219 ~ 10519469 (-)
G2103792 NA non-coding upstream 32570 10519534 ~ 10519821 (-)
G2103794 LOC107591355 non-coding upstream 34303 10521267 ~ 10521508 (-)
G2103807 NA non-coding upstream 55459 10542423 ~ 10542859 (-)
G2103808 NA non-coding upstream 56690 10543654 ~ 10552260 (-)
G2103257 NA other downstream 276283 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 367562 10113428 ~ 10115397 (-)
LOC110508476 LOC106600265 other downstream 475056 10004226 ~ 10007929 (-)
LOC110508473 LOC106600236 other downstream 671101 9739138 ~ 9883971 (-)
G2103015 NA other downstream 706051 9776619 ~ 9776908 (-)
G2103920 NA other upstream 221048 10708012 ~ 10708499 (-)
LOC110508522 NA other upstream 399234 10886198 ~ 10894141 (-)
G2105419 LOC104953893 other upstream 1012162 11499126 ~ 11500072 (-)
G2109663 LOC106599735 other upstream 5052804 15539768 ~ 15554897 (-)
G2109705 NA other upstream 5116721 15603685 ~ 15604463 (-)

Expression


Co-expression Network