G2123347


Basic Information

Item Value
gene id G2123347
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 27139430 ~ 27139758 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2427780
gagtttgtgattgctgttcagcagtctgatggccttgagatagaagctgtttctcagtctctcggtcccagctttgaggcacctgtactgaccttgtcttctggatgatagcgaggtgaacaggcagtggctcgagtggttgttgtctttgatgatctttttggccttcatgtgaaatcgggtgctgtaggtgtcctggaaggcaggcagtgtgcccccggtgatgcgttgtgcagaccgcaccaccctttgGAGAGCCTTGCGGATGAGGGCggtgtagttgccataccaggcggtgatacagcccgatgctctcaattgtgcatctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2427780 True 329 lncRNA 0.54 1 27139430 27139758

Neighbor

gene id symbol gene type direction distance location
xrn1 LOC106599575 coding upstream 2701 27069045 ~ 27136729 (+)
LOC110508195 LOC106599554 coding upstream 229533 26782925 ~ 26909897 (+)
LOC110508806 LOC106570393 coding upstream 293940 26845034 ~ 26845490 (+)
LOC110508800 LOC106599548 coding upstream 429862 26707377 ~ 26709568 (+)
LOC110508797 LOC106599544 coding upstream 452622 26679791 ~ 26688506 (+)
LOC110508820 rab2a coding downstream 191041 27330799 ~ 27345830 (+)
LOC110508821 chd7 coding downstream 208346 27348104 ~ 27454444 (+)
LOC110508826 LOC106599160 coding downstream 492718 27632476 ~ 27674752 (+)
LOC110508827 LOC106599210 coding downstream 580791 27720549 ~ 27725061 (+)
LOC110508828 LOC106599159 coding downstream 590560 27730318 ~ 27745041 (+)
G2123176 NA non-coding upstream 7511 27130863 ~ 27131919 (+)
G2123138 LOC106568867 non-coding upstream 84933 27054083 ~ 27054497 (+)
G2123137 NA non-coding upstream 87161 26988418 ~ 27052269 (+)
G2123153 NA non-coding upstream 110572 27020255 ~ 27028858 (+)
G2123152 NA non-coding upstream 111520 27019539 ~ 27027910 (+)
G2123348 NA non-coding downstream 157 27139915 ~ 27140309 (+)
G2123471 NA non-coding downstream 107082 27246840 ~ 27247171 (+)
G2123506 NA non-coding downstream 134464 27274222 ~ 27274540 (+)
G2123514 NA non-coding downstream 139261 27279019 ~ 27279248 (+)
G2123525 NA non-coding downstream 144676 27284434 ~ 27284670 (+)
G2123170 NA other upstream 30148 27106034 ~ 27109282 (+)
G2123174 NA other upstream 35160 27101312 ~ 27104270 (+)
G2123101 NA other upstream 194243 26942200 ~ 26945187 (+)
G2122177 NA other upstream 764870 26357538 ~ 26374560 (+)
LOC110508851 LOC106599130 other downstream 1382469 28522217 ~ 28551515 (+)
LOC110508880 NA other downstream 2131027 29270737 ~ 29274454 (+)
G2125614 LOC106599059 other downstream 2180985 29320743 ~ 29323384 (+)
G2126497 NA other downstream 3070489 30210247 ~ 30211633 (+)

Expression


Co-expression Network