Gene
RNA
| Item | Value |
|---|---|
| gene id | G2128165 |
| gene name | nilt2 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 31686702 ~ 31715339 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| polymeric immunoglobulin receptor-like precursor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2433223 | False | 447 | lncRNA | 0.45 | 2 | 31686702 | 31693668 |
| TU2433224 | True | 445 | lncRNA | 0.46 | 3 | 31686702 | 31715339 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508967 | LOC106598876 | coding | upstream | 8141 | 31664814 ~ 31678561 (+) |
| LOC110508221 | LOC106598877 | coding | upstream | 43240 | 31594783 ~ 31643462 (+) |
| LOC110508964 | bok | coding | upstream | 109862 | 31569613 ~ 31576840 (+) |
| trnav-cac-88 | NA | coding | upstream | 124297 | 31562333 ~ 31562405 (+) |
| trnav-cac-87 | NA | coding | upstream | 124720 | 31561910 ~ 31561982 (+) |
| LOC118944877 | NA | coding | downstream | 56466 | 31771805 ~ 31776040 (+) |
| LOC110508969 | LOC106598864 | coding | downstream | 79084 | 31794423 ~ 31804053 (+) |
| LOC110508971 | LOC100195537 | coding | downstream | 155039 | 31870378 ~ 31874729 (+) |
| LOC110508972 | LOC106598853 | coding | downstream | 164818 | 31880157 ~ 31921755 (+) |
| LOC110508974 | LOC106599183 | coding | downstream | 218423 | 31933762 ~ 31935806 (+) |
| G2128139 | NA | non-coding | upstream | 68352 | 31617966 ~ 31618350 (+) |
| G2128138 | NA | non-coding | upstream | 69031 | 31616686 ~ 31617671 (+) |
| G2128093 | NA | non-coding | upstream | 171490 | 31514987 ~ 31515212 (+) |
| G2128091 | LOC106598900 | non-coding | upstream | 175563 | 31508880 ~ 31511139 (+) |
| G2128183 | NA | non-coding | downstream | 656 | 31715995 ~ 31739051 (+) |
| G2128452 | NA | non-coding | downstream | 54367 | 31769706 ~ 31770011 (+) |
| G2128458 | NA | non-coding | downstream | 55557 | 31770896 ~ 31771285 (+) |
| G2128482 | LOC106598862 | non-coding | downstream | 110735 | 31826074 ~ 31827843 (+) |
| G2128516 | NA | non-coding | downstream | 167413 | 31882752 ~ 31883097 (+) |
| G2127299 | LOC106598972 | other | upstream | 1045459 | 30640687 ~ 30641243 (+) |
| kcnn1a | LOC106598974 | other | upstream | 1118124 | 30534338 ~ 30592397 (+) |
| G2126497 | NA | other | upstream | 1475069 | 30210247 ~ 30211633 (+) |
| G2125614 | LOC106599059 | other | upstream | 2363318 | 29320743 ~ 29323384 (+) |
| G2128189 | NA | other | downstream | 23973 | 31739312 ~ 31740070 (+) |
| G2128614 | NA | other | downstream | 229825 | 31945164 ~ 31948898 (+) |
| LOC110508984 | NA | other | downstream | 338337 | 32053231 ~ 32055655 (+) |
| G2128753 | NA | other | downstream | 553979 | 32269318 ~ 32274380 (+) |
| pfn2l | LOC106598797 | other | downstream | 915950 | 32631289 ~ 32700844 (+) |
