G2128452


Basic Information

Item Value
gene id G2128452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31769706 ~ 31770011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2433571
tgcatatacttggtagcattggatagaaaacactctgaagttcctaaaactgttaaaataatgtctgagtataacagaactgatattgcatgcAAAAAACAGAGGAAAAAAAATGTTTAGGTCACAGGCCATTTCAATGTTAGCCTATGGGAAATACAAATAGATAGGACCCATATTGAAATTCCTATggctttcactagatgtcaacagtctttagaaagggtttcaggcttgtgttTTGAAAAATTATTGAgtagttgtagtttttccaaGGTGTCTCTCATTAGAAATGTAGTCTTGTTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2433571 True 306 lncRNA 0.34 1 31769706 31770011

Neighbor

gene id symbol gene type direction distance location
LOC110508967 LOC106598876 coding upstream 91145 31664814 ~ 31678561 (+)
LOC110508221 LOC106598877 coding upstream 126244 31594783 ~ 31643462 (+)
LOC110508964 bok coding upstream 192866 31569613 ~ 31576840 (+)
trnav-cac-88 NA coding upstream 207301 31562333 ~ 31562405 (+)
trnav-cac-87 NA coding upstream 207724 31561910 ~ 31561982 (+)
LOC118944877 NA coding downstream 1794 31771805 ~ 31776040 (+)
LOC110508969 LOC106598864 coding downstream 24412 31794423 ~ 31804053 (+)
LOC110508971 LOC100195537 coding downstream 100367 31870378 ~ 31874729 (+)
LOC110508972 LOC106598853 coding downstream 110146 31880157 ~ 31921755 (+)
LOC110508974 LOC106599183 coding downstream 163751 31933762 ~ 31935806 (+)
G2128183 NA non-coding upstream 30655 31715995 ~ 31739051 (+)
G2128161 NA non-coding upstream 38847 31681306 ~ 31730859 (+)
G2128165 nilt2 non-coding upstream 54367 31686702 ~ 31715339 (+)
G2128179 NA non-coding upstream 58352 31710816 ~ 31711354 (+)
G2128177 NA non-coding upstream 60150 31705959 ~ 31709556 (+)
G2128458 NA non-coding downstream 885 31770896 ~ 31771285 (+)
G2128482 LOC106598862 non-coding downstream 56063 31826074 ~ 31827843 (+)
G2128516 NA non-coding downstream 112741 31882752 ~ 31883097 (+)
G2128456 NA non-coding downstream 152086 31922097 ~ 31922749 (+)
G2128189 NA other upstream 29636 31739312 ~ 31740070 (+)
G2127299 LOC106598972 other upstream 1128463 30640687 ~ 30641243 (+)
kcnn1a LOC106598974 other upstream 1201128 30534338 ~ 30592397 (+)
G2126497 NA other upstream 1558073 30210247 ~ 30211633 (+)
G2128614 NA other downstream 175153 31945164 ~ 31948898 (+)
LOC110508984 NA other downstream 283665 32053231 ~ 32055655 (+)
G2128753 NA other downstream 499307 32269318 ~ 32274380 (+)
pfn2l LOC106598797 other downstream 861278 32631289 ~ 32700844 (+)
G2129371 crb1 other downstream 978917 32748928 ~ 32749568 (+)

Expression


Co-expression Network