trnav-cac-88


Basic Information

Item Value
gene id trnav-cac-88
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31562333 ~ 31562405 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnav-cac-88
gtttccgtagtgtagtggttatcacgttcgcctcacacgcgaaaggtccccggttcgagaccgggcggaaaca

Function

NR:

description
PREDICTED: interferon-induced protein 44-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-cac-88 True 73 mRNA 0.58 1 31562333 31562405

Neighbor

gene id symbol gene type direction distance location
trnav-cac-87 NA coding upstream 351 31561910 ~ 31561982 (+)
LOC110508962 LOC106568816 coding upstream 21506 31524273 ~ 31540827 (+)
LOC110508961 LOC106598901 coding upstream 57455 31490899 ~ 31504889 (+)
trnaa-ugc-191 NA coding upstream 115352 31446904 ~ 31446981 (+)
LOC110508956 tf2b coding upstream 131090 31421371 ~ 31431243 (+)
LOC110508964 bok coding downstream 7208 31569613 ~ 31576840 (+)
LOC110508221 LOC106598877 coding downstream 32378 31594783 ~ 31643462 (+)
LOC110508967 LOC106598876 coding downstream 102409 31664814 ~ 31678561 (+)
LOC118944877 NA coding downstream 209400 31771805 ~ 31776040 (+)
LOC110508969 LOC106598864 coding downstream 232018 31794423 ~ 31804053 (+)
G2128093 NA non-coding upstream 47121 31514987 ~ 31515212 (+)
G2128091 LOC106598900 non-coding upstream 51194 31508880 ~ 31511139 (+)
G2128059 LOC106598894 non-coding upstream 114259 31447371 ~ 31448074 (+)
G2128043 LOC106598907 non-coding upstream 166567 31395514 ~ 31395766 (+)
G2128138 NA non-coding downstream 54281 31616686 ~ 31617671 (+)
G2128139 NA non-coding downstream 55561 31617966 ~ 31618350 (+)
G2128161 NA non-coding downstream 118901 31681306 ~ 31730859 (+)
G2128165 nilt2 non-coding downstream 124297 31686702 ~ 31715339 (+)
G2127299 LOC106598972 other upstream 921090 30640687 ~ 30641243 (+)
kcnn1a LOC106598974 other upstream 993755 30534338 ~ 30592397 (+)
G2126497 NA other upstream 1350700 30210247 ~ 30211633 (+)
G2125614 LOC106599059 other upstream 2238949 29320743 ~ 29323384 (+)
LOC110508880 NA other upstream 2287882 29270737 ~ 29274454 (+)
G2128189 NA other downstream 176907 31739312 ~ 31740070 (+)
G2128614 NA other downstream 382759 31945164 ~ 31948898 (+)
LOC110508984 NA other downstream 491271 32053231 ~ 32055655 (+)
G2128753 NA other downstream 706913 32269318 ~ 32274380 (+)

Expression


Co-expression Network