G2128043 (LOC106598907)


Basic Information

Item Value
gene id G2128043
gene name LOC106598907
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31395514 ~ 31395766 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2433075
ATCTGAAGGGGCTGGGGTGTCATGGGGAGGACGTTAGCCCTCTTGGTGCCCTTGTCCGGTGTATGCGGTGGGGGTCCCCGGGCTGCAGCCGGACCCAGCCCGCTGAGGGGGCTGGGGCCTGCTGCTGACTGTCTTGCCAGTCGAGGCTCTGTCGCCATGGAAACCTGGTTGAAGGTTTGCTGCTCTCTGGGTCTTGTCTGGCTGTGGCGGGTGTTCAGGTCTGCACCACTGTTCACCACCTGACCAATGAGAG

Function

NR:

description
probable ATP-dependent DNA helicase HFM1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2433075 True 253 lncRNA 0.63 1 31395514 31395766

Neighbor

gene id symbol gene type direction distance location
glmna glmn coding upstream 33840 31351507 ~ 31361674 (+)
LOC110508949 LOC106598913 coding upstream 55485 31335088 ~ 31340029 (+)
LOC110508946 LOC106598915 coding upstream 76454 31306108 ~ 31319060 (+)
LOC110508939 LOC106598934 coding upstream 314925 31077818 ~ 31080589 (+)
pif1 pif1 coding upstream 419432 30965713 ~ 30976082 (+)
LOC110508953 LOC106598905 coding downstream 2901 31398667 ~ 31406181 (+)
LOC110508956 tf2b coding downstream 25605 31421371 ~ 31431243 (+)
trnaa-ugc-191 NA coding downstream 51138 31446904 ~ 31446981 (+)
LOC110508961 LOC106598901 coding downstream 95133 31490899 ~ 31504889 (+)
LOC110508962 LOC106568816 coding downstream 128507 31524273 ~ 31540827 (+)
G2128040 NA non-coding upstream 4960 31390325 ~ 31390554 (+)
G2128038 NA non-coding upstream 7384 31387902 ~ 31388130 (+)
G2128036 NA non-coding upstream 8961 31386318 ~ 31386553 (+)
G2128034 NA non-coding upstream 14394 31380666 ~ 31381120 (+)
G2128031 NA non-coding upstream 17670 31377632 ~ 31377844 (+)
G2128059 LOC106598894 non-coding downstream 51605 31447371 ~ 31448074 (+)
G2128091 LOC106598900 non-coding downstream 113114 31508880 ~ 31511139 (+)
G2128093 NA non-coding downstream 119221 31514987 ~ 31515212 (+)
G2128138 NA non-coding downstream 220920 31616686 ~ 31617671 (+)
G2127299 LOC106598972 other upstream 754271 30640687 ~ 30641243 (+)
kcnn1a LOC106598974 other upstream 826936 30534338 ~ 30592397 (+)
G2126497 NA other upstream 1183881 30210247 ~ 30211633 (+)
G2125614 LOC106599059 other upstream 2072130 29320743 ~ 29323384 (+)
LOC110508880 NA other upstream 2121063 29270737 ~ 29274454 (+)
LOC110508221 LOC106598877 other downstream 244536 31594783 ~ 31643462 (+)
G2128189 NA other downstream 343546 31739312 ~ 31740070 (+)
G2128614 NA other downstream 549398 31945164 ~ 31948898 (+)
LOC110508984 NA other downstream 657910 32053231 ~ 32055655 (+)
G2128753 NA other downstream 873552 32269318 ~ 32274380 (+)

Expression


Co-expression Network