G2129384


Basic Information

Item Value
gene id G2129384
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32817036 ~ 32818438 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2434717
tagtactactgatattgattactgcattgtttggAAAGAGTGAGCaacaaaggcatttcactgtacttgtgcatgtgacaataaaaacATGACTGTAGAATGTATTTTTATTCAAAAGTATTCTGCACAGTTAGACATTGTTGTTCATTAATTATTTTCCTTACAGCTGGGGATGCCCCAATCAAACGTACATATTTTAAAAGATTGACTGGTTAGTGTTTAATCTACCCTCATCTAATCAATTGTTAAATAAAAGCTAAAGAGAAGGTCCTCTGTAAACTCAGTTGGTAGTGCAAGGTGCTTGCAATGCCACAaaagtgggtttgattcccgggaccacccatatgtaagaTTGGAGATGGGATtacaaatacaaatataggacaaaacacacatcatgaccagagagacaccacactactacataaagagagacaccacactactacataaagagagacaccacactactacataaagagagacaccacactactacataaagagagacaccacaacactacataaagagagacaccacactactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacactacaacactacataaagagagacctaagacaattacacagcatggcagcaacacatgacttcaacatggtaacaacacaacatggcagcagcacaacatggtagcagcataaaac
>TU2434715
acactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacactactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacactactacataaagagagacaccacaacactacataaagagagacaccacactactacataaagagagacaccacactactacataaagagagacaccacactactacataaagagagacaccacaacactacataaagagagacaccacactactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacactacaacactacataaagagagacctaagacaattacacagcatggcagcaacacatgacttcaacatggtaacaacacaacatggcagcagcacaacatggtagcagcataaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2434717 False 803 lncRNA 0.38 4 32817036 32818438
TU2434715 True 586 lncRNA 0.40 2 32817503 32818438

Neighbor

gene id symbol gene type direction distance location
zbtb41 zbtb41 coding upstream 32747 32759166 ~ 32803922 (+)
LOC110509011 LOC106598790 coding upstream 98189 32710595 ~ 32718847 (+)
LOC110509009 LOC106598794 coding upstream 126537 32685536 ~ 32690499 (+)
pfn2l LOC106598797 coding upstream 135183 32631289 ~ 32700844 (+)
LOC110509005 NA coding upstream 194229 32614567 ~ 32622807 (+)
LOC110509022 b3galt2 coding downstream 54493 32872931 ~ 32911932 (+)
LOC110509024 LOC106598521 coding downstream 232174 33050612 ~ 33070407 (+)
LOC110509025 LOC106598617 coding downstream 306034 33124472 ~ 33126977 (+)
LOC110509026 LOC106598516 coding downstream 338203 33156641 ~ 33165714 (+)
LOC110508226 LOC106598614 coding downstream 358314 33176752 ~ 33212483 (+)
G2129383 NA non-coding upstream 191 32816631 ~ 32816845 (+)
G2129282 NA non-coding upstream 5038 32790015 ~ 32811998 (+)
G2129379 NA non-coding upstream 20053 32788579 ~ 32796983 (+)
G2129359 NA non-coding upstream 84747 32731914 ~ 32732289 (+)
G2129358 NA non-coding upstream 85461 32731296 ~ 32731575 (+)
G2129385 NA non-coding downstream 82 32818520 ~ 32818808 (+)
G2129300 NA non-coding downstream 19697 32838135 ~ 32840836 (+)
G2129389 NA non-coding downstream 24645 32843083 ~ 32843293 (+)
G2129307 NA non-coding downstream 35582 32854020 ~ 32854367 (+)
G2129288 NA non-coding downstream 51470 32869908 ~ 32945674 (+)
G2129371 crb1 other upstream 67468 32748928 ~ 32749568 (+)
G2128753 NA other upstream 542656 32269318 ~ 32274380 (+)
LOC110508984 NA other upstream 761381 32053231 ~ 32055655 (+)
G2129639 LOC106598496 other downstream 489660 33308098 ~ 33308991 (+)
G2129708 NA other downstream 613313 33431751 ~ 33432107 (+)
G2129724 LOC106598452 other downstream 633774 33452212 ~ 33452873 (+)
G2129765 LOC106598425 other downstream 753670 33572108 ~ 33575970 (+)

Expression


Co-expression Network