G2129288


Basic Information

Item Value
gene id G2129288
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32869908 ~ 32945674 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2434611
aaatcaggcCTAGAAGTTCCGGCTTCagttgggacagagaggaggagtcaGATATGAGACACCACTCAACAGTGTCATCATTGCTGTATCCGCCTCTTCCCCAGCTAAATATCAGCACAATTCCAGATCATATTTCATGCCCCGCCTACCCAAACACGTGATTTGTTGGGGAGTTTTGTCTGTTTTTCCTTTTTGAAATGTCCAAGAGAATCTgacatccattcctctgtccaaGAGAATCTgacatccattcctctgtccaaGACAATCTGACATCCATTTCTCTGTCCAAGAGAATCTGACATCCATTTCTCTGTCCAAGAGAATCTgacatccattcctctgtccaaGAGATTCTgacatccattcctctgtccaaGATAATCTgacatccattcctctgtccaaGAGAATCTgacatccattcctctgtccaaGAGAATCTgacatccattcctctgtccaaGAGAATCTgacatccattcctctgtccaaGAGATTCTgacatccattcctctgtccaaGAGAATCTgacatccattcctctgtccaaGATAATCTgacatccattcctctgtccatGAGAATCTgacatccattcctctgtccaaGAGAATCTGACATCCATTGCCGTAGCTCCATCATTGCTCCAAGGTGTGTTACATTTTACATGTAACATCTTGAACAATGTAATGTGGGTATTTTGCATGCCAAGTAgggtcatcatcatcatattgGAGGGACATATGGTGCCCAGTTAACATAAATGTCACACGCACACAAAGACACACtaaatcaaatcgtattggtcacacacatatttagcagatgttattgcgggtgtagagaaacgcttgtgttcctagctccaacagtgcagtagtatataacaattcaaaacaatacacacaaatctaaaagtaaaagaatggaattaagaaatatgtaaatattaggactagcaatgtcggagtggcattgactaaaatacagtagaatagaaaacagtgtgtatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2434611 True 1027 lncRNA 0.41 2 32869908 32945674

Neighbor

gene id symbol gene type direction distance location
LOC110508224 kcnt2 coding upstream 33470 32814704 ~ 32836798 (+)
zbtb41 zbtb41 coding upstream 85619 32759166 ~ 32803922 (+)
LOC110509011 LOC106598790 coding upstream 151061 32710595 ~ 32718847 (+)
LOC110509009 LOC106598794 coding upstream 179409 32685536 ~ 32690499 (+)
pfn2l LOC106598797 coding upstream 188055 32631289 ~ 32700844 (+)
LOC110509024 LOC106598521 coding downstream 104938 33050612 ~ 33070407 (+)
LOC110509025 LOC106598617 coding downstream 178798 33124472 ~ 33126977 (+)
LOC110509026 LOC106598516 coding downstream 210967 33156641 ~ 33165714 (+)
LOC110508226 LOC106598614 coding downstream 231078 33176752 ~ 33212483 (+)
LOC118944857 LOC106568727 coding downstream 285848 33231522 ~ 33247262 (+)
G2129307 NA non-coding upstream 15541 32854020 ~ 32854367 (+)
G2129389 NA non-coding upstream 26615 32843083 ~ 32843293 (+)
G2129300 NA non-coding upstream 29072 32838135 ~ 32840836 (+)
G2129385 NA non-coding upstream 51100 32818520 ~ 32818808 (+)
G2129384 NA non-coding upstream 51470 32817036 ~ 32818438 (+)
G2129429 rgs1 non-coding downstream 9278 32954952 ~ 32957377 (+)
G2129522 NA non-coding downstream 145477 33091151 ~ 33092647 (+)
G2129530 NA non-coding downstream 160302 33105976 ~ 33106435 (+)
G2129552 NA non-coding downstream 208884 33154558 ~ 33154799 (+)
G2129559 NA non-coding downstream 220444 33166118 ~ 33166591 (+)
G2129371 crb1 other upstream 120340 32748928 ~ 32749568 (+)
G2128753 NA other upstream 595528 32269318 ~ 32274380 (+)
LOC110508984 NA other upstream 814253 32053231 ~ 32055655 (+)
G2129639 LOC106598496 other downstream 362424 33308098 ~ 33308991 (+)
G2129708 NA other downstream 486077 33431751 ~ 33432107 (+)
G2129724 LOC106598452 other downstream 506538 33452212 ~ 33452873 (+)
G2129765 LOC106598425 other downstream 626434 33572108 ~ 33575970 (+)

Expression


Co-expression Network