G2179014


Basic Information

Item Value
gene id G2179014
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35536463 ~ 35542879 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2490616
ccatagtctgagactctgctctccctcttcagatttccctcaacactgtaaataatgtattccccaacacaccatagtctgagactctgctctccctcttcagatttccctcaacactgtaaataatgtattcctcaacacaccatagtctgagactctgctctccctcttcagatttccctcaacactgtaaataatgtattccccaacacaccatagtcttagactctgctctccctcttcagatttccctcaacactgtaaataatgtattccccagcacaccatagtctgagactctgctctccctcttcagatttccctcaacactgcaaataatgtattccccaacacaccatagtctgagactctgctctccctcttcagatttccctcaacactgcaaataatgtattccccaacacaccatagtctgagactctgctctccctcttcagatttccctcaacactgcaaataatgtattccccaacacaccatagtctgagactctgctctccctcttcagatttccctcaacactgcaaataatgtattccccaacacaccatagactgagactctgctctccctcttcagatttccctcaacactgcaaataatgtattccccaacacaccatagtctgagactctaatctccctcttcagatttccctcaacactgtaaataatgtattccccagcacaccatagtctgagactctgctctccctcttcagatTTCCCTCAACACTGCACATAATGTATTCCCCAACACACCATAGTCTgagactctgctctccctcttcagatttccctcaacactgtaaataatgtattccCCAACACACCATAGTCTGAGACTCTGCTCTCCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2490616 True 879 lncRNA 0.45 2 35536463 35542879

Neighbor

gene id symbol gene type direction distance location
arsib LOC106602937 coding upstream 160 35528171 ~ 35536303 (+)
ndufa2 ndua2 coding upstream 29415 35505848 ~ 35507048 (+)
LOC110510182 NA coding upstream 41183 35492630 ~ 35495280 (+)
LOC110510177 LOC106563746 coding upstream 44272 35473652 ~ 35492191 (+)
oatx s226a coding upstream 63087 35467437 ~ 35473376 (+)
camk2a LOC106563741 coding downstream 13861 35556740 ~ 35655280 (+)
LOC110509382 LOC106563739 coding downstream 161167 35704046 ~ 35708070 (+)
LOC118945339 LOC106563737 coding downstream 172539 35715418 ~ 35716311 (+)
rab34b LOC106563803 coding downstream 349960 35892839 ~ 35899943 (+)
sdf2 LOC106563785 coding downstream 407710 35950589 ~ 35955683 (+)
G2179002 NA non-coding upstream 14852 35517843 ~ 35521611 (+)
G2179001 NA non-coding upstream 16343 35518449 ~ 35520120 (+)
G2178916 NA non-coding upstream 135490 35399340 ~ 35400973 (+)
G2178964 NA non-coding upstream 145945 35390268 ~ 35390518 (+)
G2179053 NA non-coding downstream 37599 35580478 ~ 35581561 (+)
G2179056 NA non-coding downstream 40837 35583716 ~ 35584613 (+)
G2179089 NA non-coding downstream 112985 35655864 ~ 35656110 (+)
G2179094 NA non-coding downstream 119334 35662213 ~ 35662475 (+)
G2179034 NA non-coding downstream 119946 35662825 ~ 35722497 (+)
LOC110510159 LOC106563679 other upstream 710918 34784319 ~ 34825545 (+)
G2177424 NA other upstream 1075694 34359624 ~ 34460769 (+)
LOC110510132 rin1 other upstream 1304280 34227307 ~ 34236487 (+)
LOC110510125 LOC106563697 other upstream 1401064 34105921 ~ 34135553 (+)
G2179418 NA other downstream 308775 35851654 ~ 35856462 (+)
G2179454 LOC106602907 other downstream 369611 35912490 ~ 35925031 (+)
G2180218 LOC106563757 other downstream 1135692 36678571 ~ 36680297 (+)
G2180378 NA other downstream 1439467 36982346 ~ 36982614 (+)
G2180382 NA other downstream 1498844 37041723 ~ 37042185 (+)

Expression


Co-expression Network