arsib (LOC106602937)


Basic Information

Item Value
gene id arsib
gene name LOC106602937
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35528171 ~ 35536303 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591555.2
GGCGGAGTAACAGCAACCACTGAGAAGGAGGATCGGTGGAAAATGTATAGACAGGCTAATTGTAACGTTCTAATGTGCAGGAGTAGCGTTCAAAGTTTAGAGCGCAAGATTACAGAACAGAAGCTTGGACATTGTAAGCGCTGGACGGTCATGACGAATGAGAATCTGTGGCGATAACAAGGTTTCATCTGTTTCCACTCTGCATCCTCGGATACGTTACGCGCGTGTGTATTCGTTTAATTTCAAGAATGTGTGTGATACAGAGTGCGAGGAGTACTATAGTGCGAGGACCGTAATGACACTAATGTCTAATTACAATCTAAAGTTGTAAAAATGCACGCAGCTACCAGCCTCTCAATGGTCAGTTTGCTAAGTTTTGGCTACCTATCCATGGAATGGATCAAGCCGAATAAAGTGGAGGAGCACACTCAAAACGATCCCTCTATTACGTTTGAGCCCAAACAACCACCACACATCATATTCATACTGACGGATGACCAAGGCTTCAATGACATAGGTTACCACAACCCGGACATTCGTACTCCAACTCTAGACAAACTGGCCTCCGAAGGGGTGAAGCTGGAGAATTATTACGTTCAACCTATCTGCACTCCGTCACGCAGTCAGCTGATCACGGGCAGATACCAGATCCACACAGGCCTTCAGCATTCCATCATCCGGCCTCGACAGCCCAACTGCCTCCCACTGGACATGACCACACTCCCACAGCGACTGCAGGAAGCAGGGTACGCTACTCACATGGTGGGCAAATGGCATCTTGGCTTCTACAGGAAGGAGTGTCTGCCCACACGCAGAGGCTTCCACAGCTACTTTGGCTCTCTGACGGGCAGTGTGGACTACTACACGTATGGTTCCTGTGACGGACCAGGCCTGTGTGGCTACGACCTCCACGAGGGGGAGACCGTGGCCTGGGGCCGTGGAGGCAAGTTCTCCACCCACCTCTACACGCAGAGGGTACGCAAGATCCTGTCCACTCACGACCCGTCCCGCCAGCCCCTCttcatgttcctctccctccaggCTGTCCACACGCCCCTTCAGTCACCCAAGGCCTACATCTACCCCTACCGCGGGATGGGGAACGTAGCCAGAAGGAAGTACGCAGCCTTGGTGTCCATCGTAGACGAGGCTGTACGCAATGTCACCTACGCTCTGCGCAAGTACGGCTACTATCGCAACAGTGTGCTCATCTTCTCCACTGACAACGGTGCCCAGCCGTTCACTGGGGGGAGTAACTGGCCCCTACGGGGACGTAAGGGGACCTACTGGGAGGGAGGTGTCCGTGGGGTGGGCTTCGTACACAGCCCACTGCTGCGTAACAAGCGGAGAGTCTCCAAGGCCCTCATGCACATCACTGACTGGTATCCAACCCTGGTGGGTCTGGCTGGGGGTAATGTGTCACTGACTGAGGGTCTGGATGGCTACAATGTGTGGCCAACCATTAGTGAAGGCAAAGAGTCTCCACGCCTGGAGATACTCCATAACATTGACCCGCTCCATCGGCGCACTGGCCTGCCCCCATCTGGTTCTGGGCAGGAGGCCCAGCATTTGTGGGACACCACAGTCCAGGCTGCCATCCGGGTGGGGGACTGGAAGCTGCTAACAGGGGACCCGGGCCATGGAGACTGGGTCCCACCACAGGTACTGGCCAACTTCCCCGGCAGCTGGTGGACCCTGGAGCGGAACACTGGAGGAACAGGGAAGTCTGTGTGGCTCTTTAACATCACAGGAGACCCCTATGAACGCAGTGACCTGGCGCTGCAGAGGCCTGATGTGGTCAAACAGCTGTTAGCACGTCTGGCCTACTACAACCGCACTGCCGTCCCGGTCCGGTTCCCAACTGACGACCCCCGGGCCAACCCAGACCGCAACGGGGGAGCCTGGGTACCCTGGGTCGGGGGGGACGAAGACGAGCAGAAATGGAACGGGGTCTACAAAAAGGGGAGGAATAAAAGGAAGAAGAAATGCAAGCTGGGTAAACTGAGATCCTTTTTCAAGAAACTGAATACAAGGATAATGTCCAATAGAATATGAGCTGGGAAAGTGAATGACACTCAGTCACATGTAGCCTTtatcagggttgggtaggtaacTTTCTACATGTATTCCGTGACTCCCCAATCCTGCCTAAACATTTAACACTGCAACAATATTCTGAGCCAGCAATATCCGTTTTCACACCTGTGTGTGCTTGTGAAAAGGGAACATGATATTTACTATTGTGCATCTCTTTGTCTGTGCCTTTAGATGTTTTGGGATGTAAGACTATTGTGTTCTATGGTATTTGTTAAATGTTCCACTACATCTATACGTAGTGTGTAGCTAAGTGAATTGAACATGCTGCATGTATACTTTGACCTACTCAACTGTGGGTTAATGGACTACTAATTAACTGACCGGTTATGGGAATGTTTTTGAGAATGTCTAAGAAATGAAACaacttattttttgttgttgttgataaccACAGAAAGTAACGTCAGATTCTTTACTTCTTTGTGAAAACCAAAGAAACTACCCACTGGGAAAAAACTGGTTGAggcaatgttgtttccacgtcatttcaacccccCAAAAACCGATGTGATGATGTTGATTCAACGTAGAAAACTCATTGGATTCACAATAAATCATCAGCATAATTTCATTTGGTCTTTTTTACACCCAACCTTTAACCTAAACCCAATGACACGGTGACATTTgttgttgaattcacattagttgacaactcaaccaagtATAAATCAAagctagatgttgaactgacgtctgtgcccagtgggtaataCCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTAATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGACATCCTCACCTTTTTACTTCTTTGTGACACCCTCATCttgacaacagacagacagaccattgGTGGATATGAAGGTATGTCATCCTACTTTGGTAGGCAACTGTGCACAACCTAATGGAAACTGAAAGGAAGAGTGTTAGTGAAATTATATGTCTTGAAGTTATTATCTTAAGACTGCTCTCGTCATGTCACAAAAGTCTGTAGAAGGTTGTAAAGGGGCCGTGCTGATAGTGGATTTTCTCCAACCGAAACCATTCAACTCTGTAGTAAATGATTGATTCAGAAATCTACCAAGAATGTAATCAGGCCTCAGCAGGGAATTTAAAAACAAAGGTCTGTCTGGCCTTCCTAAACACAGCTAGGGTCTACtctagggttccccaactggtggcccaCGGGCCGAATTTGTCCCGCATGTGGTTTTATTTGGCACCCCAAGTATTCTgagccaatatatatatatatatatatatatatttagaatttTGTTATCTATCTTTTTACATTTTCTTTTACtgttggacataaaatactgtGAAAACATCAGACAATCAACTCGAAGTGGTTTTCATtatggaaatctgttccaaagtattgcAACGCATAATAGAGAAGATAtatgtgattgtatacaaatgtaaaagcaaggtttgaaatgtaaatgttttagtcaaatattaaatC
>TU2490605
AATGGATCAAGCCGAATAAAGTGGAGGAGCACACTCAAAACGATCCCTCTATTACGTTTGAGCCCAAACAACCACCACACATCATATTCATACTGACGGATGACCAAGGCTTCAATGACATAGGTTACCACAACCCGGACATTCGTACTCCAACTCTAGACAAACTGGCCTCCGAAGGGGTGAAGCTGGAGAATTATTACGTTCAACCTATCTGCACTCCGTCACGCAGTCAGCTGATCACGGGCAGATACCAGATCCACACAGGCCTTCAGCATTCCATCATCCGGCCTCGACAGCCCAACTGCCTCCCACTGGACATGACCACACTCCCACAGCGACTGCAGGAAGCAGGGTACGCTACTCACATGGTGGGCAAATGGCATCTTGGCTTCTACAGGAAGGAGTGTCTGCCCACACGCAGAGGCTTCCACAGCTACTTTGGCTCTCTGA
>TU2490607
TGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACTAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTAAATGTCTTTGTGATAACCACAGAAACCAACATCATATTCCTCTATATGTCTTTGTGATAACCACAGACATCCTCACCTTTTTACTTCTTTGTGACACCCTCATCttgacaacagacagacagaccattgGTGGATATGAAGGTATGTCATCCTACTTTGGTAGGCAACTGTGCACAACCTAATGGAAACTGAAAGGAAGAGTGTTAGTGAAATTATATGTCTTGAAGTTATTATCTTAAGACTGCTCTCGTCATGTCACAAAAGTCTGTAGAAGGTTGTAAAGGGGCCGTGCTGATAGTGGATTTTCTCCAACCGAAACCATTCAACTCTGTAGTAAATGATTGATTCAGAAATCTACCAAGAATGTAATCAGGCCTCAGCAGGGAATTTAAAAACAAAGGTCTGTCTGGCCTTCCTAAACACAGCTAGGGTCTACtctagggttccccaactggtggcccaCGGGCCGAATTTGTCCCGCATGTGGTTTTATTTGGCACCCCAAGTATTCTgagccaatatatatatatatatatatatatatttagaatttTGTTATCTATCTTTTTACATTTTCTTTTACtgttggacataaaatactgtGAAAACATCAGACAATCAACTCGAAGTGGTTTTCATtatggaaatctgttccaaagtattgcAACGCATAATAGAGAAGATAtatgtgattgtatacaaatgtaaaagcaa

Function

NR:

description
PREDICTED: arylsulfatase I-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591555.2 False 4365 mRNA 0.45 2 35528171 35536303
TU2490605 False 450 lncRNA 0.52 2 35528565 35532782
TU2490607 True 1322 lncRNA 0.35 2 35534769 35536266

Neighbor

gene id symbol gene type direction distance location
ndufa2 ndua2 coding upstream 21123 35505848 ~ 35507048 (+)
LOC110510182 NA coding upstream 32891 35492630 ~ 35495280 (+)
LOC110510177 LOC106563746 coding upstream 35980 35473652 ~ 35492191 (+)
oatx s226a coding upstream 54795 35467437 ~ 35473376 (+)
LOC110510179 LOC106563750 coding upstream 62252 35454702 ~ 35465919 (+)
camk2a LOC106563741 coding downstream 20437 35556740 ~ 35655280 (+)
LOC110509382 LOC106563739 coding downstream 167743 35704046 ~ 35708070 (+)
LOC118945339 LOC106563737 coding downstream 179115 35715418 ~ 35716311 (+)
rab34b LOC106563803 coding downstream 356536 35892839 ~ 35899943 (+)
sdf2 LOC106563785 coding downstream 414286 35950589 ~ 35955683 (+)
G2179002 NA non-coding upstream 6560 35517843 ~ 35521611 (+)
G2179001 NA non-coding upstream 8051 35518449 ~ 35520120 (+)
G2178916 NA non-coding upstream 127198 35399340 ~ 35400973 (+)
G2178964 NA non-coding upstream 137653 35390268 ~ 35390518 (+)
G2178960 NA non-coding upstream 153917 35373952 ~ 35374254 (+)
G2179014 NA non-coding downstream 160 35536463 ~ 35542879 (+)
G2179053 NA non-coding downstream 44175 35580478 ~ 35581561 (+)
G2179056 NA non-coding downstream 47413 35583716 ~ 35584613 (+)
G2179089 NA non-coding downstream 119561 35655864 ~ 35656110 (+)
G2179094 NA non-coding downstream 125910 35662213 ~ 35662475 (+)
LOC110510159 LOC106563679 other upstream 702626 34784319 ~ 34825545 (+)
G2177424 NA other upstream 1067402 34359624 ~ 34460769 (+)
LOC110510132 rin1 other upstream 1295988 34227307 ~ 34236487 (+)
LOC110510125 LOC106563697 other upstream 1392772 34105921 ~ 34135553 (+)
G2179418 NA other downstream 315351 35851654 ~ 35856462 (+)
G2179454 LOC106602907 other downstream 376187 35912490 ~ 35925031 (+)
G2180218 LOC106563757 other downstream 1142268 36678571 ~ 36680297 (+)
G2180378 NA other downstream 1446043 36982346 ~ 36982614 (+)
G2180382 NA other downstream 1505420 37041723 ~ 37042185 (+)

Expression


Co-expression Network