G2178964


Basic Information

Item Value
gene id G2178964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35390268 ~ 35390518 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2490558
gtcttttaccaaatagggctatcgtcttgtgggcttggtcttttaccaaatagggctatcgtcttatggacttggtcttttaccaaatagggctatcgtcttgtggacttggtcttttaccaaatagggctattgtcttatggacttggtcttttaccaaatagggctatcgtcttgtgggcttggtcttttaccaaatagggctatcgtcttatggacttggtcttttaccaaatagggctatcgtcttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2490558 True 251 lncRNA 0.42 1 35390268 35390518

Neighbor

gene id symbol gene type direction distance location
LOC110510170 LOC106563669 coding upstream 427310 34914257 ~ 35005608 (+)
LOC110510169 NA coding upstream 494541 34887683 ~ 34895727 (+)
LOC118945311 NA coding upstream 498921 34888168 ~ 34891347 (+)
LOC110510168 LOC106602948 coding upstream 513927 34872715 ~ 34876341 (+)
cx04a cx04a coding upstream 519366 34869958 ~ 34870902 (+)
LOC110510179 LOC106563750 coding downstream 64184 35454702 ~ 35465919 (+)
oatx s226a coding downstream 76919 35467437 ~ 35473376 (+)
LOC110510177 LOC106563746 coding downstream 83134 35473652 ~ 35492191 (+)
LOC110510182 NA coding downstream 102112 35492630 ~ 35495280 (+)
ndufa2 ndua2 coding downstream 115333 35505848 ~ 35507048 (+)
G2178960 NA non-coding upstream 16014 35373952 ~ 35374254 (+)
G2178955 NA non-coding upstream 25193 35364743 ~ 35365075 (+)
G2178948 NA non-coding upstream 41902 35347954 ~ 35348366 (+)
G2178935 NA non-coding upstream 57440 35332550 ~ 35332828 (+)
G2178933 NA non-coding upstream 58792 35331257 ~ 35331476 (+)
G2178916 NA non-coding downstream 8822 35399340 ~ 35400973 (+)
G2179002 NA non-coding downstream 127325 35517843 ~ 35521611 (+)
G2179001 NA non-coding downstream 127931 35518449 ~ 35520120 (+)
arsib LOC106602937 non-coding downstream 138047 35528171 ~ 35536303 (+)
G2179014 NA non-coding downstream 145945 35536463 ~ 35542879 (+)
LOC110510159 LOC106563679 other upstream 564723 34784319 ~ 34825545 (+)
G2177424 NA other upstream 929499 34359624 ~ 34460769 (+)
LOC110510132 rin1 other upstream 1158085 34227307 ~ 34236487 (+)
LOC110510125 LOC106563697 other upstream 1254869 34105921 ~ 34135553 (+)
cxxc5a LOC106563628 other upstream 2154733 33212994 ~ 33235535 (+)
G2179418 NA other downstream 461136 35851654 ~ 35856462 (+)
G2179454 LOC106602907 other downstream 521972 35912490 ~ 35925031 (+)
G2180218 LOC106563757 other downstream 1288053 36678571 ~ 36680297 (+)
G2180378 NA other downstream 1591828 36982346 ~ 36982614 (+)

Expression


Co-expression Network