G2180278


Basic Information

Item Value
gene id G2180278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 36807043 ~ 36807276 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2492123
ggaaaagcagccaacaagtgctcagtatatgtaggaactccttcaagactgtcggaaaagcattccaggtgaagctggttgagagaatgacaagagtgtgcaaaactgtcatcaaggcaaagggtggctactttgaagaatctcaaatgtaaaatatgtttagatttgtttaacacttttttggttactacatgattccatatgtgttatttcaatacAGAGTCAGGAATAACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2492123 True 234 lncRNA 0.38 1 36807043 36807276

Neighbor

gene id symbol gene type direction distance location
LOC118945292 NA coding upstream 162892 36637911 ~ 36644151 (+)
LOC110510207 LOC106563759 coding upstream 171635 36614866 ~ 36635408 (+)
LOC118945346 NA coding upstream 307418 36487463 ~ 36499625 (+)
LOC118945345 NA coding upstream 351509 36451022 ~ 36455534 (+)
LOC110510213 NA coding upstream 356723 36447884 ~ 36450338 (+)
LOC110510201 LOC106563753 coding downstream 62317 36869593 ~ 36871603 (+)
arl3l1 LOC106563754 coding downstream 240937 37048213 ~ 37051629 (+)
LOC110510196 LOC106563728 coding downstream 246397 37053673 ~ 37059512 (+)
LOC110510194 LOC106563726 coding downstream 266651 37073927 ~ 37211008 (+)
rs14 LOC100194652 coding downstream 410268 37217544 ~ 37220508 (+)
G2180273 NA non-coding upstream 5082 36801717 ~ 36801961 (+)
G2180245 LOC106563724 non-coding upstream 55176 36750583 ~ 36751867 (+)
G2180237 NA non-coding upstream 71684 36730213 ~ 36735359 (+)
G2180211 LOC106563762 non-coding upstream 96779 36705887 ~ 36710264 (+)
G2180225 NA non-coding upstream 106050 36700793 ~ 36700993 (+)
G2180292 NA non-coding downstream 21295 36828571 ~ 36828802 (+)
G2180291 NA non-coding downstream 24984 36832260 ~ 36832527 (+)
G2180329 NA non-coding downstream 83978 36891254 ~ 36913230 (+)
G2180375 NA non-coding downstream 173122 36980398 ~ 36980686 (+)
G2180379 NA non-coding downstream 187885 36995161 ~ 36995361 (+)
G2180218 LOC106563757 other upstream 126746 36678571 ~ 36680297 (+)
G2179454 LOC106602907 other upstream 882012 35912490 ~ 35925031 (+)
G2179418 NA other upstream 950581 35851654 ~ 35856462 (+)
ndufa2 ndua2 other upstream 1300164 35505848 ~ 35507048 (+)
LOC110510159 LOC106563679 other upstream 1981498 34784319 ~ 34825545 (+)
G2180378 NA other downstream 175070 36982346 ~ 36982614 (+)
G2180382 NA other downstream 234447 37041723 ~ 37042185 (+)
G2180811 NA other downstream 610141 37417417 ~ 37468092 (+)
G2180897 NA other downstream 853311 37660587 ~ 37662215 (+)
G2180928 NA other downstream 897872 37705148 ~ 37705729 (+)

Expression


Co-expression Network