G2180611


Basic Information

Item Value
gene id G2180611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 37071260 ~ 37071486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2492506
AATATATTCCACTCATTATCTGAATTTCATTGATACACTGTAAGCTGATGAATTTTGCCAAGCAGAGAGACAGGCGATACTGTATCAGTTGACAAGTCACATAGAAAAGGTGATCTTGTACAATGTTGCATGGGGCAAAAATGGCAGACAACACCGTAATACGTTTTCACATCAGCCAACTGCTATACAGAACCCCTAATTCTGATGTTTTGTACAAGGTTAATGAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106604169

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2492506 True 227 lncRNA 0.38 1 37071260 37071486

Neighbor

gene id symbol gene type direction distance location
LOC110510196 LOC106563728 coding upstream 11748 37053673 ~ 37059512 (+)
arl3l1 LOC106563754 coding upstream 19631 37048213 ~ 37051629 (+)
LOC110510201 LOC106563753 coding upstream 199657 36869593 ~ 36871603 (+)
LOC118945292 NA coding upstream 427109 36637911 ~ 36644151 (+)
LOC110510207 LOC106563759 coding upstream 435852 36614866 ~ 36635408 (+)
LOC110510194 LOC106563726 coding downstream 2441 37073927 ~ 37211008 (+)
rs14 LOC100194652 coding downstream 146058 37217544 ~ 37220508 (+)
cd74b LOC100136155 coding downstream 160850 37232336 ~ 37235298 (+)
LOC110510192 LOC106563729 coding downstream 171588 37243074 ~ 37264474 (+)
LOC118945320 NA coding downstream 193273 37264759 ~ 37267070 (+)
G2180603 NA non-coding upstream 17610 37053446 ~ 37053650 (+)
G2180383 NA non-coding upstream 28154 37042486 ~ 37043106 (+)
G2180380 NA non-coding upstream 67384 37003660 ~ 37003876 (+)
G2180379 NA non-coding upstream 75899 36995161 ~ 36995361 (+)
G2180375 NA non-coding upstream 90574 36980398 ~ 36980686 (+)
G2180670 NA non-coding downstream 94246 37165732 ~ 37166086 (+)
G2180691 NA non-coding downstream 140454 37211940 ~ 37212145 (+)
G2180705 NA non-coding downstream 151438 37222924 ~ 37223329 (+)
G2180706 NA non-coding downstream 151877 37223363 ~ 37223583 (+)
G2180382 NA other upstream 29075 37041723 ~ 37042185 (+)
G2180378 NA other upstream 88646 36982346 ~ 36982614 (+)
G2180218 LOC106563757 other upstream 390963 36678571 ~ 36680297 (+)
G2179454 LOC106602907 other upstream 1146229 35912490 ~ 35925031 (+)
G2179418 NA other upstream 1214798 35851654 ~ 35856462 (+)
G2180811 NA other downstream 345931 37417417 ~ 37468092 (+)
G2180897 NA other downstream 589101 37660587 ~ 37662215 (+)
G2180928 NA other downstream 633662 37705148 ~ 37705729 (+)
G2181669 NA other downstream 1102570 38174056 ~ 38184872 (+)
LOC110509461 uspl1 other downstream 1726071 38760853 ~ 38819031 (+)

Expression


Co-expression Network