XLOC_004073


Basic Information

Item Value
gene id XLOC_004073
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 17223850 ~ 17229853 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008462
TTTAAATGGAAGATTCATTCTAATATGTCATGATTTTGTAATAGAACATTTGTTTGAAAGTTCTCAGTGTTTTCTCAATTTCTTCGGGTGtgattttttacattgtcatgcCAATTTTCACTAATGTTTGTCAAGTCATGACAAATCCTCTATATTCTGCAAATATACTGTTTGTCTGAGTTGCTATTGCTGCGGGCTGCAGTTTAgaaaacattttcagaataaaTGGAAGGAAGATGCAGGTAGAGAAGTTGTTTATTAATCAGACTGGTGGAATGTCATGCCTTTTCTCAGCTTATTCTATTATTTTAGTCAGCTTGTTGCTGTGTGTGCACTTCTATCATGTTTGAATCTGTGTATTTTCCTCAAATCTCCTTTTGTCTGCTAATCTTACTCAACTAATGTATGCTTGTTCATATAAtctatcaATCGAAAACAATGGATTTTTAATACGTATCAGTATCAGATGTAGgcaatgtggtggcgcagtaggtagtgctgtcgccttagagcaagaaggtcgctggtttgtgcctcggctgggtcaattggcatttctgtgtggagtctgcatgttctccccatgttggagttctccgagtgctccggtttcctcccacagttcaaagacgtgcagtacaggtgaattgggtaagctaaaattgtcctatgtttctgagtgtgaatgagtgtgtatgggtgtttcccagtgatgggttgcgaaggccatctgctgcataaaacatatgctggataagttggcagttaattccgctgtggtgaccccagattaataaagggactaagccaaaaataaatgaatgagtatcaaatgtaattattagttaattaaacaatattagtagtattttgcaatattg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008462 True 881 lncRNA 0.38 2 17223850 17229853

Neighbor

gene id symbol gene type direction distance location
XLOC_004072 CR769769.3 coding downstream 76389 17144309 ~ 17147461 (-)
XLOC_004071 CR769769.2 coding downstream 125917 17093753 ~ 17097933 (-)
XLOC_004070 NA coding downstream 132655 17081422 ~ 17091195 (-)
XLOC_004069 suclg2 coding downstream 248660 16738179 ~ 16975190 (-)
XLOC_004068 AL844563.1 coding downstream 548686 16669218 ~ 16675164 (-)
XLOC_004074 tafa4b coding upstream 367126 17596979 ~ 17713987 (-)
XLOC_004075 eogt coding upstream 496796 17726649 ~ 17755444 (-)
XLOC_004076 tmf1 coding upstream 527489 17757342 ~ 17782930 (-)
XLOC_004077 uba3 coding upstream 555329 17785182 ~ 17803137 (-)
XLOC_004078 CR589944.2 coding upstream 677049 17906902 ~ 17908682 (-)
XLOC_004063 CR854846.1 misc downstream 1096172 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 4532159 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 4602083 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 4632554 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 4710588 12512966 ~ 12513262 (-)
XLOC_004067 AL844563.2 non-coding downstream 579337 16644397 ~ 16644513 (-)
XLOC_004082 LO018315.7 non-coding upstream 914432 18144285 ~ 18148488 (-)
XLOC_004092 NA non-coding upstream 1620073 18849926 ~ 18852369 (-)
XLOC_004093 NA non-coding upstream 1858561 19088414 ~ 19091101 (-)
XLOC_004095 CT737428.1 non-coding upstream 1950599 19180452 ~ 19180555 (-)

Expression


Co-expression Network