XLOC_004070


Basic Information

Item Value
gene id XLOC_004070
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 17081422 ~ 17091195 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008783
GCTTGTGTTGCTGGATAGTCACGAGGGCAAATGTTTTCAGttctgaGATATTGCTGCAATCATGAAGGTGATACCTGATCAGCCTAGACATCCCACAAGGATCCACTGTGAGATGAAAGCAGTCCGGCATGTTCCTCTAAACCGCCCACTGCTCTGGTCACCTCCAGTAGTAATTGCATGTATGGGATTTAAAGAATCCAATAAAGACTGAGAAGATCCGTGTGATGCTTCAGAAGCAGAAGTGCTGGCCGTTGGGGCTGGTGAGAGAAGGTGTGTTTAGGCTGAAACCCCCGCAGTTCATCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008783 True 303 lncRNA 0.49 2 17081422 17091195

Neighbor

gene id symbol gene type direction distance location
XLOC_004069 suclg2 coding downstream 106232 16738179 ~ 16975190 (-)
XLOC_004068 AL844563.1 coding downstream 406258 16669218 ~ 16675164 (-)
XLOC_004067 AL844563.2 coding downstream 436909 16644397 ~ 16644513 (-)
XLOC_004066 lrig1 coding downstream 685466 16329776 ~ 16395956 (-)
XLOC_004065 rab7a coding downstream 865952 16176603 ~ 16215470 (-)
XLOC_004071 CR769769.2 coding upstream 2558 17093753 ~ 17097933 (-)
XLOC_004072 CR769769.3 coding upstream 53114 17144309 ~ 17147461 (-)
XLOC_004073 NA coding upstream 132655 17223850 ~ 17229853 (-)
XLOC_004074 tafa4b coding upstream 505784 17596979 ~ 17713987 (-)
XLOC_004075 eogt coding upstream 635454 17726649 ~ 17755444 (-)
XLOC_004063 CR854846.1 misc downstream 953744 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 4389731 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 4459655 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 4490126 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 4568160 12512966 ~ 12513262 (-)
XLOC_004062 NA non-coding downstream 961132 16120012 ~ 16120290 (-)
XLOC_004059 CR848761.1 non-coding downstream 1023115 16058191 ~ 16058307 (-)
XLOC_004057 FP003590.1 non-coding downstream 1234909 15845588 ~ 15846513 (-)
XLOC_004078 CR589944.2 non-coding upstream 815707 17906902 ~ 17908682 (-)
XLOC_004082 LO018315.7 non-coding upstream 1053090 18144285 ~ 18148488 (-)

Expression


Co-expression Network