XLOC_004066 (lrig1)


Basic Information

Item Value
gene id XLOC_004066
gene name lrig1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 16329776 ~ 16395956 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007757
CAGAGCCTGGCCGTCAATCATGCCCCAAGAGCCAATTGTAAAGCAGAACGAGGGAATCTTTATCACTTCTGATGTATCCAACGTGGGACGAAGGAACGTCTggataaaaagaaagtaaagtccgGGAGGGGGAAAACAAGCGGTGGAAACGGTTAGAAGTGCGAGGTGAATTTGTAAATTATCAGAGTTTTCGGACCGTACAACGAGATCAAGATAAAAGCTTCCCAATTCCTTCAACCGCGCGCTGGAAGGAGAGAGTGTACGAACGAACGAGAGAGCCGCAAAGTTCACAACAGTCGGACGGCTTTACTGGAACTGTTTCTCTTCAaaactgttttattgtttttacttgACTGATCGTGGAGTCGCAGTTTGGATACTTTGTAAGAAGAAACGAGAGCCTCAAACTTTTTAAAGAGTGCGGTTTTCCCTGTGGAAAAGTTTCTTTAAAGCGCCGATGATCCTAGATTTTCCTTCAACGCGCTCGTGTGGAGTTAATGGACACGATCTACTATGTGTTTACTCTTCGTTATAATGAATCCCTTAGGATCAAAACATTATAAGAAGTTCAGAAACACCGTGGACAATTTAAACTCCTCAAACTACATTTGATTCAGTGGATCGCTCTTGCCAAAACAAAGCGCCCGTCTATCCCCCATACAGACCCCCTTTTCAACCTTTTAAGGACAACTGCATTTAGTTTTGGCTACTGGACAAGTTTCTTGTATTGCCTCGTCGTGATTCACCTTTGATTTACTTACGTGGTGCTGCagaggagattttttttcaaactgtgggaCTGTTTTCAAGTTCAGGGCAGATGCATTGCCCGAAAGCAACGCAGTATAATTTGATAGTACCGCTGGGTAAACAAACAACTTAATGAAGGCGAATTACTCGAACTCTGAGAAACTCAATAAGCTCGAGCTGTCCGTTTGTGGATGAGAGAGATCAGTCGTTAAGCGCTGAGACAACTGGATACAAAATGGCGGCGTGGCTGGGACAGATGGGATCACTTTCATATCATGTGTTTTATTGGCTTTTGACGCTGGAACTGTTAATCAATTATGGCGCACCGTGTCCTCAAAACTGTACGTGTACGCTTGATACGACCGACTGCAGTCGTTTGGACATGACTGATGTCCCTCAAGACTTGCCAAAGAGCACTGTGCATCTAAATCTGAGCCACAACAAGCTGACGGCAGTCGATATGGACATCCTCTCCAATCTGCCCCACCTGAGAGAAGTGAGGCTTGACCACAATGAGCTGACATCTATCCCTTCATTTGGAGATGCCGCAGCATCAGTTGTTACACTTCTCCTGCACCATAATAGAATCCGCAGACTGGAGGGGAGTCTTCTACAGAACTTCTCTGCTCTTGAGACGCTAGATTTGAGTAATAATGACATCACAGAGTTGAGAGAGCACTGCTTCCCTCTGGGGTTACAAATCAAAGACCTGCACCTGAGCAGTAATAAGATCGTTCATCTGGAGTTCGGGGCATTTAAGAATCTTGCCGGGAGTCTGCAGATCCTCAGATTGAGCCGGAACCGATTAACTCATCTTCCTGTTAAAGGCCTGGAGCTGCCCAAACTCACACAACTGGAGTTGAGTAGGAACAGGTTGCGGTTGATCGAGGGACTCACCTTCCAAGGTTTGAGCAGTTTAGAAGTTCTCAAGCTTCAGAGAAACAACATCAGCAAACTAACAGATGGGGCATTCTGGGGTCTGGCCCGGATGAGGGTTCTGCACCTGGACTATAACAGTCTACGAGAAGTGAACAGTGGCTCTCTGTATGGTCTGGAGTCTCTGCTGCAGCTCTACCTCGCCAACAATTCCATCTCAAACTTTAACCCTGAGGGTTGGGGCTTTTGTGAGAGACTTCGAGAACTGAATTTGTCTTATAATAACCTGACGAAGTTGTCTGAGGGTAGTTTTGCCAAGCTGGTAAACCTGATTTCCCTGCGTTTGGGACACAATTCCATCAGTCACATCACTGAAGGAGCATTCAGAGGCCTTAGCTCCCTGCGCACACTGGAGTTGGACCACAATGACATCTCTGGAACTATTGAGGACACCAGTGGGGCCTTCACTGGCCTCGAAAACCTCAACAAGCTAACTCTGTTTGGAAACAAGATCAAGTCGGTGGCCAAGAAAGCCTTCTCTGGCCTGGAGGCTCTGGAGCACCTGAATTTAGGGGAAAATGCCATCCGCTCCATCCAACCCGAGGCATTCAGCAAGATGAAGAACCTGCGCTACCTTCATATTCAGAGCGACAGTTTTCTGTGTGACTGTCAGCTGCACTGGTTTCCAGATTGGCTCCTCACTCGAGGGCTGAACCCTGGTGTTCAGGCCACATGTGCCCATCCAGAGAGCCTAAAGGGCACCAGCATCTACCAAGCCCCACCACAGAGCTTTGTTTGTGATGACCTTCCCAAACCCCAGATCACGGTTCACCCAGTCACCACAGCTGCAGTATTGGGTAAAGACGTGCGTCTGACCTGTACTGCTGCCAGCAGCAGCAGTTCTCCCATGACCTTCACCTGGCTAAAGGACCAGGAGACACTCCGCCAGGCTGAGGTGGAGAACTTTGCCCATGTGCGGGCCAGCGATGGAGGAGTGATGGAGTACACTACGATCCTTCACCTTCGACACGTCACCTTCAACCATGAGGGACGATACCAGTGCATCATCAGCAATCACTTCGGCTCCTCTTACTCCAACAAGGCCCGCGTCACTGTAAACGTCCTGCCTTCGTTCGTCAAGACCCCACGTGACATCACCATCCGCACAGGCACCAAAGCGCGGTTGGAGTGTGCGGCCGAAGGGCATCCGACTCCACAGGTGGCATGGCAGAAAGATGGCGGAACAGACTTCCCTGCTGCCCGAGAGCGGCGCATGCGTGTGATGCCTGATGATGATGTGTTCTTTATCATGGATGTGAAGCCAGAGGATATGGGTGTTTACAGCTGCACAGCGAAAAACACAGCAGGCATGATCTCCGCCAACGTCACCTTAACAGTGCTAGAGACCCCTCATCTGGCACAGGAAATGGAGGATCGTAATGTGGTGGTAGGCGAAACTGTAGCACTGCAGTGCAAGGCTTTGGGCAGTCCACCACCTCGCATCACCTGGCTGAAGGGTGAAGAGCCTCTTCGAGCCAGCGACCGTCATCACTTCACTCCAGGAAATCAGCTGTTGGTGATCGGCAGCAGCACATTAGAGGATGCTGGACGCTACACTTGTGTGATGTCCAATACGCTCGGCACCGAACGTGCTCACTCGCAGCTCACTGTCTACCAGAGATTTGAGGAGTGCGCACCTTTTACCAGCCCCAGCACTGTTACTGTAGGCATCATCATCATCGCTGTGGTCACCAGTATTGTGGTGACTTCACTAGTTTGGGTGTGTATTATCTATCAGACCAGGAAGAAGAGCGAGGAGTGCAGTGTAAACACAGATGAGACGATTGTCCCTCCTGATGTTCCCAGTTACCTGTCCTCTCAGGGCACTTTATCAGAAAGACAGGACGTGTGTATACGAGTGGAGTCCAATGGGGGATCTCAGCCCAATGGACGAATAGAAAGCAATGGCTACGATGTGCCGGTCGTGTGCGCAGACTGCTTGGAAAACAGCACCAGCTACTCCAAACACTGTAACTACCTCCCTCACGATTTAGCGCCCCCTTCAGGCATGGAGTATCAGCAGACGCACCAAACATCAACTTTCACCAGCCTCAGCAATGAACCACACTGCAACGGCACTCCAAACGGCCTTAGAAAAGACAACCAAACACCCATCTTTCCCACCAACCACGACAGGGTGACAATATCACCCTCATCAAACCAGTACAGTGACCGAAATGGATTGTTGGTGAACAAGTCAGACACACCACTGTCACTGGAGGAGTCGTACCATCGGCCAGTAAAACTGCTGTCTGAGGACTGTGACATTGGGTCAGAGCTCACACAGACTCTATTACCCAACGGACACACACACGCGCCCAGTTCAGCTCTAAACCAGAGCCAATCCTTTAGGCGGGACAGTGACTAACGCCACACCAAGCCTCTTCTTGACATCCTTTTGCACTGAGAACTGCTACCTCACACTGAGGGGCGCAGAAAAAACCCGCCCCGATTTTCTGAACAGAATTAGGGGCGTCCGGAGTTTGAAGGTTATAAAGCTTGAACGGGGCGATGACGACGTCCCATACGAGCGTTATTGATGTATATAGGTATAAATCCTCCTCAGGGAGGCTTCATTCACACTTCAGAAATGTGATTTGCATTTGACGCATGCAAAATATATGACAGAGTGCTATAACGTCGGGCTTGGAGCTGTACATAAGAGttttcatatataaagatatGAATGTATGTATACTGTAACTTTTACAAACGAGTGTCGGACTATTCGGTGCATGGTGAGATCAGAgtgattcttgtttttttttaagatctcTCCTGCTTTTCCCAGTTTTATAAGCAGTGCCTTATTGCCACAAGCTTGGTTTTTGTCTGGAGATGTCGGTGTTGTGTTACCTTTCACAAAAATGGGAAATTTGTCACGCACTTGAAGTTAATATAAGTTTAAATTGGTCGGATTATAGGAATATTCCAGGTTAAACATGAGATATTGAGTACCCATGGTAATAAATAGGTGGTGAAAAAAGAACTAGAAAAGTAATGAATATTAggtcattttttaaattgtgaaCAATTCCACAGTTCAGATTTGAGGAGGTCATTTGCCTTTTTTTGGCATagatacataaaataaatcaaacgaGACAGTAAATACGTTTTTACTGAAGGATTTAAGTTCTTTTGAACTTCTTTTACTtaagtttttattaaataaatgtagtgCTCATGAGTGttaatctaaaaaacaaaaataaacagtcCTCGGATGCTCTTTtattcaattagttttttttttatttactgacttACTGTTACTAAAATATATGTTAGAAGCAATTATAATCAACagtttcaacatatttttaaaataacattttaacttAACCCATAGTGAATGGTGAGTACTTTGAGcacatactttttaaaaagtcGACTTGTGGCAGATTATTGCTTTAgcaggaaaatgaaatgaaaaagtgCTTAATTGTTATAAACAAAATCCACGAAATATGAGTTGAACATTTTATATGGAAcctctattttttttaatatagaattgAAATTGAAACTCAAAGCCCAAAACAAAaaggacaaaagcgtctgctaaatgacagtatgtttacatggacaccaataatccgattttaataattaagacaatactctgattcagagtctaccatgtaaacagtgatttttgattaatttaatccaaaggtcataatcaaaataaacagaaattggagtaagatgtggagtatgctgattttattCGAATTATTGAAGTGTAGTATTTAAACACCTAACAATCAacctattaccatcatgtaggattttcgaCGTATTTTGCAACAAGATAGTCTATACAGGCTGTTTGACAATATTCTCTGCACCGACCGAGTCGGTGAAGGACcacagatgcacacattgtgaaATGCGGAGGTTTATTTGCTCATACAGCGTGCAGTATCCCATTCCATTACAACTTCCATAAGTTCATACTCGCATGCAACTTCATGTTAGAAACAgggacatgcatgaaatgttcttgaatgaaagtgaaagtgccaattacagttaaagtcgacaaattaaaaattaaacgcCCGAAAtaacatgaaactctggaggaaatgaaGATAGCGTGGTGACGCGATGAAggtaatcgaattatgtgctgacatgtaaaacgagatcatgaaagaaacattcatgAAGCAAATCACATTAAGGCAAACAATCGataactgatgtccatgtaaacgtagacAATGTAAAATCGGAAAATTAAAgagatttgtttacttatttgagTTTGACATCTCTAAAGATGTGCTTAGagagtaattcattcattttctatacGCCTATTTCCAATCAAAGAGCATCAGAGGGTTTTTCTTAAATCTCTAGAATTGACGTTAATTGCTAATTGTAActcaataaataatgaaaatttacTATTAAAATAGTTGTCAAGCAGTCTTAAAGTTAAcgacacacacatttacatgctTTACCAAGACTCTCCATAGTAGTAATCtactttatactgtaaaaactgcttgttATATGGCCTTAAcgtacccctaaacccaacccttggAGAAAACTGgtggcaaattttgaatgttGAAAAACCCTGTTAAgtattttaagcattttgaatgaCAAGGACACAAAacagtcctcataaaccaccttagAGTACAACTAGTTCATCCCAACAAGTTTGCATTcatgtaaaccacataaacaagtacacacacacacacacacacaaaacagatcAAGTATTATATTTGCTATCAATATCTAGTGTTTAATCTGGAATATTCCTTTGCCGTAATATATACGCTGTGATCTGTGATGAAGGAAGAGCTCCTCGTTGAATTTTCAGGTCTGTTATGGAGCAGAAACTGAGAACATTGGCATGCGGGAAAATATAAGCACTTTGATGAATCTTACAAAAGCTGAACACTCTTACACCCTGAAATTGTGCCGCAATCGAGCCTCTTCTGTTAACAAAGGTACACGCCACTACTATCTGAAATGAACTTCTTTTTAACACTTGGGAAATATCACAACTATTAAATAATGAAACAGGGAGAGCGGTTCTAACATTGACTTCTAGCTAACAACAAAACCATACGCTGCCAAAACacaaaagggaaataaatacGAGTCTCTAGAAAGAGTCAAGCTGCATTTTGCATTCAGGGTTTTCCTTCAACTACAGAATGTCTTGGTGGAAAGGGAAAACAAAGCGtcaacaaaacattattaattagCCTGAGCCAAACAGGTTCATTTTTAAAGCCCGgtttctttgttttgtgttttttttttttttaactaaaacatCTCTACTACTAAACTAGGGGAGTGTTTGTAAAGGTAGATTACAGCGGATGCCAGTTTAACCCTAAAATGTTTTGATACTGTGGTTAGCTGGCTATGCTAGCTCTGTGAAGAAGGCCATAAACTGTACGGATGTGTGCCTCAGCCCGTTTCATACGGattaatttattgaaatattgagcTCTAATCACAGCTGTTTCACCTACATGCCTAAAACTGTGTCAAAAAAGTGTCAAAATGGCGGGTGTTCATTAAAGTCACATTTTGCTCTTTTA
>TCONS_00007758
CAGAGATTTGAGGAGTGCGCACCTTTTACCAGCCCCAGCACTGTTACTGTAGGCATCATCATCATCGCTGTGGTCACCAGTATTGTGGTGACTTCACTAGTTTGGGTGTGTATTATCTATCAGACCAGGAAGAAGAGCGAGGAGTGCAGTGTAAACACAGATGAGACGATTGTCCCTCCTGATGTTCCCAGTTACCTGTCCTCTCAGGGCACTTTATCAGAAAGACAGGACGTGTGTATACGAGTGGAGTCCAATGGGGGATCTCAGCCCAATGGACGAATAGAAAGCAATGGCTACGATGTGCCGGTCGTGTGCGCAGACTGCTTGGAAAACAGCACCAGCTACTCCAAACACTGTAACTACCTCCCTCACGATTTAGCGCCCCCTTCAGGCATGGAGTATCAGCAGACGCACCAAACACCCATCTTTCCCACCAACCACGACAGGGTGACAATATCACCCTCATCAAACCAGTACAGTGACCGAAATGatttctgatcaagttatgccagatttattaatgtagtgaatcatctgattttcatcgAGCAGGATTGTTGGTGAACAAGTCAGACACACCACTGTCACTGGAGGAGTCGTACCATCGGCCAGTAAAACTGCTGTCTGAGGACTGTGACATTGGGTCAGAGCTCACACAGACTCTATTACCCAACGGACACACACACGCGCCCAGTTCAGCTCTAAACCAGAGCCAATCCTTTAGGCGGGACAGTGACTAACGCCACACCAAGCCTCTTCTTGACATCCTTTTGCACTGAGAACTGCTACCTCACACTGAGGGGCGCAGAAAAAACCCGCCCCGATTTTCTGAACAGAATTAGGGGCGTCCGGAGTTTGAAGGTTATAAAGCTTGAACGGGGCGATGACGACGTCCCATACGAGCGTTATTGATGTATATAG
>TCONS_00007760
ATGGCGGCGTGGCTGGGACAGATGGGATCACTTTCATATCATGTGTTTTATTGGCTTTTGACGCTGGAACTGTTAATCAATTATGGCGCACCGTGTCCTCAAAACTGTACGTGTACGCTTGATACGACCGACTGCAGTCGTTTGGACATGACTGATGTCCCTCAAGACTTGCCAAAGAGCACTGTGCATCTGAGGCTTGACCACAATGAGCTGACATCTATCCCTTCATTTGGAGATGCCGCAGCATCAGTTGTTACACTTCTCCTGCACCATAATAGAATCCGCAGACTGGAGGGGAGTCTTCTACAGAACTTCTCTGCTCTTGAGACGCTAGATTTGAGTAATAATGACATCACAGAGTTGAGAGAGCACTGCTTCCCTCTGGGGTTACAAATCAAAGACCTGCACCTGAGCAGTAATAAGATCGTTCATCTGGAGTTCGGGGCATTTAAGAATCTTGCCGGGAGTCTGCAGATCCTCAGATTGAGCCGGAACCGATTAACTCATCTTCCTGTTAAAGGCCTGGAGCTGCCCAAACTCACACAACTGGAGTTGAGTAGGAACAGGTTGCGGTTGATCGAGGGACTCACCTTCCAAGGTTTGAGCAGTTTAGAAGTTCTCAAGCTTCAGAGAAACAACATCAGCAAACTAACAGATGGGGCATTCTGGGGTCTGGCCCGGATGAGGGTTCTGCACCTGGACTATAACAGTCTACGAGAAGTGAACAGTGGCTCTCTGTATGGTCTGGAGTCTCTGCTGCAGCTCTACCTCGCCAACAATTCCATCTCAAACTTTAACCCTGAGGGTTGGGGCTTTTGTGAGAGACTTCGAGAACTGAATTTGTCTTATAATAACCTGACGAAGTTGTCTGAGGGTAGTTTTGCCAAGCTGGTAAACCTGATTTCCCTGCGTTTGGGACACAATTCCATCAGTCACATCACTGAAGGAGCATTCAGAGGCCTTAGCTCCCTGCGCACACTGGAGTTGGACCACAATGACATCTCTGGAACTATTGAGGACACCAGTGGGGCCTTCACTGGCCTCGAAAACCTCAACAAGCTAACTCTGTTTGGAAACAAGATCAAGTCGGTGGCCAAGAAAGCCTTCTCTGGCCTGGAGGCTCTGGAGCACCTGAATTTAGGGGAAAATGCCATCCGCTCCATCCAACCCGAGGCATTCAGCAAGATGAAGAACCTGCGCTACCTTCATATTCAGAGCGACAGTTTTCTGTGTGACTGTCAGCTGCACTGGTTTCCAGATTGGCTCCTCACTCGAGGGCTGAACCCTGGTGTTCAGGCCACATGTGCCCATCCAGAGAGCCTAAAGGGCACCAGCATCTACCAAGCCCCACCACAGAGCTTTGTTTGTGATGACCTTCCCAAACCCCAGATCACGGTTCACCCAGTCACCACAGCTGCAGTATTGGGTAAAGACGTGCGTCTGACCTGTACTGCTGCCAGCAGCAGCAGTTCTCCCATGACCTTCACCTGGCTAAAGGACCAGGAGACACTCCGCCAGGCTGAGGTGGAGAACTTTGCCCATGTGCGGGCCAGCGATGGAGGAGTGATGGAGTACACTACGATCCTTCACCTTCGACACGTCACCTTCAACCATGAGGGACGATACCAGTGCATCATCAGCAATCACTTCGGCTCCTCTTACTCCAACAAGGCCCGCGTCACTGTAAACGTCCTGCCTTCGTTCGTCAAGACCCCACGTGACATCACCATCCGCACAGGCACCAAAGCGCGGTTGGAGTGTGCGGCCGAAGGGCATCCGACTCCACAGGTGGCATGGCAGAAAGATGGCGGAACAGACTTCCCTGCTGCCCGAGAGCGGCGCATGCGTGTGATGCCTGATGATGATGTGTTCTTTATCATGGATGTGAAGCCAGAGGATATGGGTGTTTACAGCTGCACAGCGAAAAACACAGCAGGCATGATCTCCGCCAACGTCACCTTAACAGTGCTAGAGACCCCTCATCTGGCACAGGAAATGGAGGATCGTAATGTGGTGGTAGGCGAAACTGTAGCACTGCAGTGCAAGGCTTTGGGCAGTCCACCACCTCGCATCACCTGGCTGAAGGGTGAAGAGCCTCTTCGAGCCAGCGACCGTCATCACTTCACTCCAGGAAATCAGCTGTTGGTGATCGGCAGCAGCACATTAGAGGATGCTGGACGCTACACTTGTGTGATGTCCAATACGCTCGGCACCGAACGTGCTCACTCGCAGCTCACTGTCTACCAGAGATTTGAGGAGTGCGCACCTTTTACCAGCCCCAGCACTGTTACTGTAGGCATCATCATCATCGCTGTGGTCACCAGTATTGTGGTGACTTCACTAGTTTGGGTGTGTATTATCTATCAGACCAGGAAGAAGAGCGAGGAGTGCAGTGTAAACACAGATGAGACGATTGTCCCTCCTGATGTTCCCAGTTACCTGTCCTCTCAGGGCACTTTATCAGAAAGACAGGACGTGTGTATACGAGTGGAGTCCAATGGGGGATCTCAGCCCAATGGACGAATAGAAAGCAATGGCTACGATGTGCCGGTCGTGTGCGCAGACTGCTTGGAAAACAGCACCAGCTACTCCAAACACTGTAACTACCTCCCTCACGATTTAGCGCCCCCTTCAGGCATGGAGTATCAGCAGACGCACCAAACATCAACTTTCACCAGCCTCAGCAATGAACCACACTGCAACGGCACTCCAAACGGCCTTAGAAAAGACAACCAAACACCCATCTTTCCCACCAACCACGACAGGGTGACAATATCACCCTCATCAAACCAGTACAGTGACCGAAATGGATTGTTGGTGAACAAGTCAGACACACCACTGTCACTGGAGGAGTCGTACCATCGGCCAGTAAAACTGCTGTCTGAGGACTGTGACATTGGGTCAGAGCTCACACAGACTCTATTACCCAACGGACACACACACGCGCCCAGTTCAGCTCTAAACCAGAGCCAATCCTTTAGGCGGGACAGTGACTAA
>TCONS_00007759
ATGGCGGCGTGGCTGGGACAGATGGGATCACTTTCATATCATGTGTTTTATTGGCTTTTGACGCTGGAACTGTTAATCAATTATGGCGCACCGTGTCCTCAAAACTGTACGTGTACGCTTGATACGACCGACTGCAGTCGTTTGGACATGACTGATGTCCCTCAAGACTTGCCAAAGAGCACTGTGCATCTAAATCTGAGCCACAACAAGCTGACGGCAGTCGATATGGACATCCTCTCCAATCTGCCCCACCTGAGAGAAGTGAGGCTTGACCACAATGAGCTGACATCTATCCCTTCATTTGGAGATGCCGCAGCATCAGTTGTTACACTTCTCCTGCACCATAATAGAATCCGCAGACTGGAGGGGAGTCTTCTACAGAACTTCTCTGCTCTTGAGACGCTAGATTTGAGTAATAATGACATCACAGAGTTGAGAGAGCACTGCTTCCCTCTGGGGTTACAAATCAAAGACCTGCACCTGAGCAGTAATAAGATCGTTCATCTGGAGTTCGGGGCATTTAAGAATCTTGCCGGGAGTCTGCAGATCCTCAGATTGAGCCGGAACCGATTAACTCATCTTCCTGTTAAAGGCCTGGAGCTGCCCAAACTCACACAACTGGAGTTGAGTAGGAACAGGTTGCGGTTGATCGAGGGACTCACCTTCCAAGGTTTGAGCAGTTTAGAAGTTCTCAAGCTTCAGAGAAACAACATCAGCAAACTAACAGATGGGGCATTCTGGGGTCTGGCCCGGATGAGGGTTCTGCACCTGGACTATAACAGTCTACGAGAAGTGAACAGTGGCTCTCTGTATGGTCTGGAGTCTCTGCTGCAGCTCTACCTCGCCAACAATTCCATCTCAAACTTTAACCCTGAGGGTTGGGGCTTTTGTGAGAGACTTCGAGAACTGAATTTGTCTTATAATAACCTGACGAAGTTGTCTGAGGGTAGTTTTGCCAAGCTGGTAAACCTGATTTCCCTGCGTTTGGGACACAATTCCATCAGTCACATCACTGAAGGAGCATTCAGAGGCCTTAGCTCCCTGCGCACACTGGAGTTGGACCACAATGACATCTCTGGAACTATTGAGGACACCAGTGGGGCCTTCACTGGCCTCGAAAACCTCAACAAGCTGAATTTAGGGGAAAATGCCATCCGCTCCATCCAACCCGAGGCATTCAGCAAGATGAAGAACCTGCGCTACCTTCATATTCAGAGCGACAGTTTTCTGTGTGACTGTCAGCTGCACTGGTTTCCAGATTGGCTCCTCACTCGAGGGCTGAACCCTGGTGTTCAGGCCACATGTGCCCATCCAGAGAGCCTAAAGGGCACCAGCATCTACCAAGCCCCACCACAGAGCTTTGTTTGTGATGACCTTCCCAAACCCCAGATCACGGTTCACCCAGTCACCACAGCTGCAGTATTGGGTAAAGACGTGCGTCTGACCTGTACTGCTGCCAGCAGCAGCAGTTCTCCCATGACCTTCACCTGGCTAAAGGACCAGGAGACACTCCGCCAGGCTGAGGTGGAGAACTTTGCCCATGTGCGGGCCAGCGATGGAGGAGTGATGGAGTACACTACGATCCTTCACCTTCGACACGTCACCTTCAACCATGAGGGACGATACCAGTGCATCATCAGCAATCACTTCGGCTCCTCTTACTCCAACAAGGCCCGCGTCACTGTAAACGTCCTGCCTTCGTTCGTCAAGACCCCACGTGACATCACCATCCGCACAGGCACCAAAGCGCGGTTGGAGTGTGCGGCCGAAGGGCATCCGACTCCACAGGTGGCATGGCAGAAAGATGGCGGAACAGACTTCCCTGCTGCCCGAGAGCGGCGCATGCGTGTGATGCCTGATGATGATGTGTTCTTTATCATGGATGTGAAGCCAGAGGATATGGGTGTTTACAGCTGCACAGCGAAAAACACAGCAGGCATGATCTCCGCCAACGTCACCTTAACAGTGCTAGAGACCCCTCATCTGGCACAGGAAATGGAGGATCGTAATGTGGTGGTAGGCGAAACTGTAGCACTGCAGTGCAAGGCTTTGGGCAGTCCACCACCTCGCATCACCTGGCTGAAGGGTGAAGAGCCTCTTCGAGCCAGCGACCGTCATCACTTCACTCCAGGAAATCAGCTGTTGGTGATCGGCAGCAGCACATTAGAGGATGCTGGACGCTACACTTGTGTGATGTCCAATACGCTCGGCACCGAACGTGCTCACTCGCAGCTCACTGTCTACCAGAGATTTGAGGAGTGCGCACCTTTTACCAGCCCCAGCACTGTTACTGTAGGCATCATCATCATCGCTGTGGTCACCAGTATTGTGGTGACTTCACTAGTTTGGGTGTGTATTATCTATCAGACCAGGAAGAAGAGCGAGGAGTGCAGTGTAAACACAGATGAGACGATTGTCCCTCCTGATGTTCCCAGTTACCTGTCCTCTCAGGGCACTTTATCAGAAAGACAGGACGTGTGTATACGAGTGGAGTCCAATGGGGGATCTCAGCCCAATGGACGAATAGAAAGCAATGGCTACGATGTGCCGGTCGTGTGCGCAGACTGCTTGGAAAACAGCACCAGCTACTCCAAACACTGTAACTACCTCCCTCACGATTTAGCGCCCCCTTCAGGCATGGAGTATCAGCAGACGCACCAAACATCAACTTTCACCAGCCTCAGCAATGAACCACACTGCAACGGCACTCCAAACGGCCTTAGAAAAGACAACCAAACACCCATCTTTCCCACCAACCACGACAGGGTGACAATATCACCCTCATCAAACCAGTACAGTGACCGAAATGGATTGTTGGTGAACAAGTCAGACACACCACTGTCACTGGAGGAGTCGTACCATCGGCCAGTAAAACTGCTGTCTGAGGACTGTGACATTGGGTCAGAGCTCACACAGACTCTATTACCCAACGGACACACACACGCGCCCAGTTCAGCTCTAAACCAGAGCCAATCCTTTAGGCGGGACAGTGACTAA
>TCONS_00007761
GTGTGTATTATCTATCAGACCAGGAAGAAGAGCGAGGAGTGCAGTGTAAACACAGATGAGACGATTGTCCCTCCTGATGTTCCCAGTTACCTGTCCTCTCAGGGCACTTTATCAGAAAGACAGGACGTGTGTATACGAGTGGAGTCCAATGGGGGATCTCAGCCCAATGGACGAATAGAAAGCAATGGCTACGATGTGCCGGTCGTGTGCGCAGACTGCTTGGAAAACAGCACCAGCTACTCCAAACACTGTAACTACCTCCCTCACGATTTAGCGCCCCCTTCAGGCATGGAGTATCAGCAGACGCACCAAACACCCATCTTTCCCACCAACCACGACAGGGTGACAATATCACCCTCATCAAACCAGTACAGTGACCGAAATGGATTGTTGGTGAACAAGTCAGACACACCACT
>TCONS_00007762
CCCATACAGACCCCCTTTTCAACCTTTTAAGGACAACTGCATTTAGTTTTGGCTACTGGACAAGTTTCTTGTATTGCCTCGTCGTGATTCACCTTTGATTTACTTACGTGGTGCTGCagaggagattttttttcaaactgtgggaCTGTTTTCAAGTTCAGGGCAGATGCATTGCCCGAAAGCAACGCAGTATAATTTGATAGTACCGCTGGGTAAACAAACAACTTAATGAAGGCGAATTACTCGAACTCTGAGAAACTCAATAAGCTCGAGCTGTCCGTTTGTGGATGAGAGAGATCAGTCGTTAAGCGCTGAGACAACTGGATACAAAATGGCGGCGTGGCTGGGACAGATGGGATCACTTTCATATCATGTGTTTTATTGGCTTTTGACGCTGGAACTGTTAATCAATTATGGCGCACCGTGTCCTCAAAACTGTACGTGTACGCTTGATACGACCGACTGCAGTCGTTTGGACATGACTGATGTCCCTCAAGACTTGCCAAAGAGCACTGTGCATCTAAATCTGAGCCACAACAAGCTGACGGCAGTCGATATGGACATCCTCTCCAATCTGCCCCACCTGAGAGAAGTGAGGCTTGACCACAATGAGCTGACATCTATCCCTTCATTTGGAGATGCCGCAGCATCAGTTGTTACACTTCTCCTGTAAGTGAAACATTGTATGCCTTGATGACTGCTGAAGCTGCACTTTCTATGCATGACAAAAATGACTGTTTACATCATACGGgcaatcagaaaaaaagaaaaaaaa

Function

symbol description
lrig1 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in axis; central nervous system; notochord; pharyngeal arch 3-7 skeleton; and somite. Orthologous to human LRIG1 (leucine rich repeats and immunoglobulin like domains 1).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-031113-23 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in axis; central nervous system; notochord; pharyngeal arch 3-7 skeleton; and somite. Orthologous to human LRIG1 (leucine rich repeats and immunoglobulin like domains 1).

Ensembl:

ensembl_id ENSDARG00000075625

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007757 False 7283 mRNA 0.43 18 16329776 16395956
TCONS_00007758 False 921 nonsense_mediated_decay 0.49 6 16332824 16336886
TCONS_00007760 False 2997 mRNA 0.52 17 16333005 16394971
TCONS_00007759 False 2997 mRNA 0.51 17 16333005 16394971
TCONS_00007761 False 416 mRNA 0.50 5 16333162 16336781
TCONS_00007762 True 775 lncRNA 0.44 3 16373672 16395302

Neighbor

gene id symbol gene type direction distance location
XLOC_004065 rab7a coding downstream 114306 16176603 ~ 16215470 (-)
XLOC_004064 arpc4l coding downstream 177376 16139897 ~ 16152400 (-)
XLOC_004062 NA coding downstream 209486 16120012 ~ 16120290 (-)
XLOC_004061 rpf1 coding downstream 213972 16094661 ~ 16115804 (-)
XLOC_004060 SPATA1 coding downstream 236754 16084581 ~ 16093022 (-)
XLOC_004067 AL844563.2 coding upstream 248441 16644397 ~ 16644513 (-)
XLOC_004068 AL844563.1 coding upstream 273262 16669218 ~ 16675164 (-)
XLOC_004069 suclg2 coding upstream 342223 16738179 ~ 16975190 (-)
XLOC_004070 NA coding upstream 685466 17081422 ~ 17091195 (-)
XLOC_004071 CR769769.2 coding upstream 697797 17093753 ~ 17097933 (-)
XLOC_004063 CR854846.1 misc downstream 202098 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 3638085 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 3708009 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 3738480 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 3816514 12512966 ~ 12513262 (-)
XLOC_004059 CR848761.1 non-coding downstream 271469 16058191 ~ 16058307 (-)
XLOC_004057 FP003590.1 non-coding downstream 483263 15845588 ~ 15846513 (-)
XLOC_004055 FP016142.1 non-coding downstream 520757 15806392 ~ 15809019 (-)
XLOC_004054 FP016142.7 non-coding downstream 526139 15802450 ~ 15803637 (-)
XLOC_004072 CR769769.3 non-coding upstream 748353 17144309 ~ 17147461 (-)

Expression


Co-expression Network