si:dkeyp-51f12.2


Basic Information

Item Value
gene id si:dkeyp-51f12.2
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 27095766 ~ 27098459 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036969363.1
AGTCTGGAAGGAATAAAAGAAAACCAACATTTCATTTGTATTTCTACTGCTGTACCTGAAGATAATGAACTCTGTGCAAATGTTTTTCAACTTTAACTTTCATTTAACTTCAAATCCATTCATCACCTTTGCTTCTTGAATCCAAATAACCCACACGGACCTGGGAACCACACTTGGAATGGGACCTGGTCCCATGGAACTGACCAGAACAGAGCACGCCTAACGGGTTATTTACCAGGGGGTTACATCCCTGGTGATCCCATAGAGAGGGAGATGCCTTCCCTGAACCACagaaactaacacacacacaaacctcatcCCCGGAGGTCCCAGAGCGATGCCTTCCCTCCACCACGGCGCCATCTTCCTCGGAGTCTTTCTCATCGCGACAGGCGGCTCCACTGCCTTTCTCACCTCCTCACAGAGCCGCCTGCAGGCGTTCTCTCTGTGCTGTGTGGTGCTGGGAGCCGTCATGCTGATCCTGGGGCTTCTCTGGGCCATGAGTAACAAGCACCAGGTAGAGTACAGCCAGGGAGAGTACCCCAACTTCCCCCAATACCCCCACCAGGGAGAACACCCCAACTATCCCTACCCACACCCAGACCTCAACTACCCTGGCCGGTACGCCCATCCTGACCTGGGACATGTCCTCTTCAGCCCCCGTGGTCCTGTTGGACACTTCCCAGAGTCCCAGTCAGCCCTACTGCAGAGgACTGAGCACCAACGGCGAGGTGTGTATGGGGCTAATGATGTGGACTACCCCCCACTCAGCCCCCCTTCCCGCTACCCCCCCGGGCTGGGCCCCCCACCTCCCTACGAGGTCGCCATAAAGACCACCTGTAGCTCCACCCACCTGCGCCGCGCCTACtcagacacacacctgtcctcgGAACCCCTGTTTGGCCGATCACGGGAGATCAGCTTTGAGGTGTGACATCACCAGACAGGCCCACACACTGCCTCCACCCACCACACTGGAGGAGGAATACTGTGGCCACACCCTTCACTCAGGCTCTTCCAATCAGCTGTCAGCCCATAGGAAAAGGCAGGAATAGGAGATTGCCCTAAAGCAACACTCTGAGCAGCATATTATCTGTCTGTCTTCAACAACCTGTAGTTGAGCATGTTTTCACAAGCTACCTTTTAAATGAGACATTGAGTTTGCCTGGTGCAAAGGAACCGATGGAATAgcccaaaagtgcaaaccacaCTCAATGTCCGCAGTGCCTTTCCCTACCTCTGCTAGCTCTTTACATTATATGCATGTGTAACAGAATATAAAAGTTAAATACTATTTAATTTATGTAAAGTTCAGCAAAATAGTCTGAATACTTTAAATGATTTCATGTCATCTAATAGTCCTTTTGAAATCCAAATGTGATACATTAATGTGTCTGCGAGGACATCTAGTGGTCAGTCGACATGCTAGACAATTAAAACCATACAAATACCACATCCAGCCCCCTCCTAAAGGGTTTTGTCTAGCAGGGATACAGCTTCAGTCAACATAGAATTTTCTTAGCAGGTTTAAAGGCGACGCATGGTCAATCTGTTGTCTGCATTCGCcgtgcagcatttacggtgaGACGGCCTCTGCAGAaatcagggcattcatacttcttgtgcTTCGCGGATCAGCGCAGAGCTGTTGAGTAGAGCTGTTATGAAgtaagttgtcaaggaagtgagtttgtgtttgtacaggacctcccgcccccatctaccgtcaaccaatcatgtcaatgcaggACTATACAGCGCTGTATGGATCcctccacattgttacaacatttgggaGGCGCATGGCGATGCGGTATacagctcaatttggcctcttgCACGACTCCGGAGGCCACGAAATTGCGTCACACCCTCCAAATGGTGTCTCCTaccacattttcagatcaagcaTATAATTTACGCAGCGGTTTAGGTTAATGTAGCAGGTTGTTAAGTTTAGGGAAAAGGTtagctaaaataaaaaatataacgtTTGACGTCAAATTTGACTaaagctgtatcccatctagacatgacccttaaaggctctgcatggtcaatctgTAACACATGATGACCCACCTGTTCTGCCACAAGGAGAATGTAGTATGCAGAAACAGGCTCCACATACACAATCAGCCCAGAGATGTATCTCCTTGGCTGATTAATGAATGAGTTATGGTACTTTATAAATGCACATATTGTTATTCTGTGCAATTTTGTTGTATAAGACTATGAATTTAGGAATTAGATTCCaagggcctcatttatcaataaTGCATAGGCACAAATCTGTGTGTAAATAATGCTTGGGATAATTTCCACGCAAAGTGTAAGATTTATCAATATGAACATTGGATTGAGGCTGCACAAATTTAAGCACAGCCATGACATTGGGTATGCACAGTGGCATGTGGTGGAATAAGGGAACTGCTTGTCAAGTGTAGAATGAGAAAAATATATGTTGAAAATGTGTAAAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036969363.1 True 2481 mRNA 0.47 3 27095766 27098459

Neighbor

gene id symbol gene type direction distance location
bsnd bsnd coding downstream 17545 27076797 ~ 27078221 (-)
bloc1s2 bl1s2 coding downstream 72492 27010229 ~ 27023274 (-)
prkaa2 prkaa2 coding downstream 254033 26822337 ~ 26900172 (-)
LOC118945904 NA coding downstream 574911 26520805 ~ 26520855 (-)
LOC110521628 LOC106584226 coding downstream 650700 26376325 ~ 26445066 (-)
LOC110521640 LOC106584214 coding upstream 59090 27157549 ~ 27180815 (-)
LOC110521641 LOC106584215 coding upstream 88105 27186564 ~ 27196880 (-)
LOC110522773 NA coding upstream 99982 27198322 ~ 27202122 (-)
LOC100136211 LOC106584216 coding upstream 127040 27225499 ~ 27235345 (-)
LOC110521643 cac3 coding upstream 151446 27249905 ~ 27252746 (-)
G2218366 NA non-coding downstream 19036 27074664 ~ 27076730 (-)
G2218193 NA non-coding downstream 122582 26972943 ~ 26973184 (-)
G2218188 NA non-coding downstream 128470 26967072 ~ 26967296 (-)
G2218186 NA non-coding downstream 129683 26965620 ~ 26966083 (-)
G2218185 NA non-coding downstream 130581 26963487 ~ 26965185 (-)
G2218427 NA non-coding upstream 14140 27112599 ~ 27118548 (-)
G2218421 dhcr24 non-coding upstream 22576 27121035 ~ 27122661 (-)
G2218428 NA non-coding upstream 26006 27124465 ~ 27124794 (-)
G2218467 NA non-coding upstream 104151 27202610 ~ 27202812 (-)
G2218118 NA other downstream 205155 26888889 ~ 26890611 (-)
G2217824 NA other downstream 754271 26268346 ~ 26341495 (-)
G2217805 prrc2c other downstream 858368 26236685 ~ 26237398 (-)
G2217605 NA other downstream 1175521 25917354 ~ 25920245 (-)
G2213647 NA other downstream 3896360 23197647 ~ 23199406 (-)
G2219594 NA other upstream 746415 27844874 ~ 27845401 (-)
G2219602 NA other upstream 764945 27863404 ~ 27864068 (-)
lnx1 lnx1 other upstream 1274837 28307617 ~ 28382340 (-)
G2221180 NA other upstream 2370184 29468643 ~ 29473675 (-)

Expression


Co-expression Network