LOC100136211 (LOC106584216)


Basic Information

Item Value
gene id LOC100136211
gene name LOC106584216
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 27225499 ~ 27235345 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036969314.1
ACAGTCAGGTTGAGGTTTTCCCGCCCCAGCGCTATATAAGCAGCATGCAGGACCTCTCCAGGTAGCCAGATAGCTCAGGTGAATTCCCCTTTTCATAAGGACTGCTGCAAAAGCCAACTCCTCCACTTCAGGGCAATGGCTCCTCGTCCAGAAGTCAGAGATACCTCGTCTCCCACTCTTGATGATGCACATACGGCACCCAAAGACTCAGTCATCCTGCCAGCATATTCTACAGAGGACAAGTATGAGGATGACCCCTGGAACCTCCCTGAACTGCAGGACAATGGACTCAAGTGGTCAGAGTTGGATACCAAAGGGAAGGTTTTGCGGGTTCTGACTGCGAGTGTCAAGTTCATTCTGCTGGTTGGATTTCTCTACATGTTCGTTTGCTCTCTAGATGTCCTGAGCTCTGCTTTCCAGCTAGTTGGAGGTAAGGCAGCTGGGGACATCTTCCAGGACAATGCGGTGCTGTCCAACCCTGTGGCTGGCCTGGTGATTGGAGTGCTGGTCACATTGTTAGTCCAGAGTTCTAGCACGTCCTCCTCTATTGTGGTCAGCATGGTGTCTTCTGGATTGCTGGAGGTCCAGTCTGCAGTGCCAGTCATTATGGGAGCCAACATTGGAACCTCAGTCACCAACACCATTGTGGCCATGATGCAGGCAGGGGACAGAAATGAGTTCCGCAGGGCGTTTGCTGGTGCCACAGTGCATGACTTCTTCAACTGGCTGTCTGTGCTAATCCTGCTGCCTCTGGAGGCAGCTACTGGTGTCCTGTACAAACTCACCAAGATCATCATCGACTCCTTCAACATCCAGGGGGGAAACAACGCCCCTGACCTGCTCAACGTCATCACCGACCCTCTCACCGATGCCATCATAGAGCTGGACAAAAATGTAATCAGTGACATTGCCACCGGCGACCCAGCAGCCAGAAACAAGAGTTTGATCAAAATCTGGTGCAAAACAGAGAAAATCACGACTCTTGTGAATATAACAGTTCCCTCAGATGCCAATTGCACGACCGGTGCCCTCTGTTGGGTGGAAGGCAACAAGACATTGACCCAGATAAATGTCACTGAAACAATCAATCTAGAGAGATGCAACCATATCTTTGTTTTTGCTAACCTGCCTGACCTGGCTGTGGGCCTCATTCTGCTGGCCCTATCCCTGCTCATCCTCTGTACCTGCCTCATCCTCATTGTCAAGCTGCTCAACTCCATGCTTAAGGGACAGGTGGCTGTGGTCATCAAGAAGGTGCTCAACACAGACTTCCCTTTCCCCTTTGGCTGGGTCACTGGTTACATTGCCATCATGGTCGGAGCAGGAATGACCTTCATTGTCCAGAGCAGCTCTGTCTTCACCTCTGCAATCACTCCCCTTGTTGGTATTGGTGTTATTAGCCTTGAGAGAGCTTATCCTCTGACATTGGGCTCAAATATCGGCACAACTACCACTGCAATTCTTGCTGCTATGGCTGCTCCTGGAGAAACACTGGCCAACTCACTGCAGgttgCACTGTGCCATTTCTTCTTCAACATAGCGGGGATTCTGCTGTGGTACCCCATCCCCTTCACTCGGATCCCCATCCGCTTGGCCAGAGCCCTGGGGAACCGCACAGCAAAGTACCGTTGGTTCGCAGCGCTCTACCTCTTACTCTGCTTCCTCCTCATGCCCTTGACTATCCTGGGGCTCTCCCTGGCCGGCTGGCAAGTCCTGGTTGGGGTGGCCGTACCCATCGTTGTCCTCGCCATCTTCATCATCGTTGTTAACCTGATGCAGGCACGTTGTCCTCAGTACCTGCCCAGCGGGCTGCGTGACTGGGACTTCCTGCCCCGCCCCCTGCACTCCATGGCCCCCTGGGACCGTGTGGTGACTTCAGGCATGGCCTTCTGCGGCgctcgctgctgctgctgctgcaagtGCTGCCAGAGTACTGACGATGAAGAGAAGGGTTtgcaggagaggaagaagagtctGGAGATATATGATAACCCAGTCCTAACCAGAGACGATGAGCCGCAAGAGACCTCCAAGGAAACTATGAAAGCCACACAGCTCTAACACAGTTAACATATCCATCTgacaatgacccagcacacctacaggcagtgtaagggctatttgaccaagaaggagttacagagtgctgcatcagatgacctgtcctccacaatcacctgacagcAGCCCAATTGAGATTATTTGAGATGAGTTGGAGTgaaagaaaatcagccaacaagtgctcatcatatgtgggaactccttcaagactgttggaacagtattccaggtgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaag
>XM_021599329.2
ACAGTCAGGTTGAGGTTTTCCCGCCCCAGCGCTATATAAGCAGCATGCAGGACCTCTCCAGGTAGCCAGATAGCTCAGGTGAATTCCCCTTTTCATAAGGACTGCTGCAAAAGCCAACTCCTCCACTTCAGGGCAATGGCTCCTCGTCCAGAAGTCAGAGATACCTCGTCTCCCACTCTTGATGATGCACATACGGCACCCAAAGACTCAGTCATCCTGCCAGCATATTCTACAGAGGACAAGTATGAGGATGACCCCTGGAACCTCCCTGAACTGCAGGACAATGGACTCAAGTGGTCAGAGTTGGATACCAAAGGGAAGGTTTTGCGGGTTCTGACTGCGAGTGTCAAGTTCATTCTGCTGGTTGGATTTCTCTACATGTTCGTTTGCTCTCTAGATGTCCTGAGCTCTGCTTTCCAGCTAGTTGGAGGTAAGGCAGCTGGGGACATCTTCCAGGACAATGCGGTGCTGTCCAACCCTGTGGCTGGCCTGGTGATTGGAGTGCTGGTCACATTGTTAGTCCAGAGTTCTAGCACGTCCTCCTCTATTGTGGTCAGCATGGTGTCTTCTGGATTGCTGGAGGTCCAGTCTGCAGTGCCAGTCATTATGGGAGCCAACATTGGAACCTCAGTCACCAACACCATTGTGGCCATGATGCAGGCAGGGGACAGAAATGAGTTCCGCAGGGCGTTTGCTGGTGCCACAGTGCATGACTTCTTCAACTGGCTGTCTGTGCTAATCCTGCTGCCTCTGGAGGCAGCTACTGGTGTCCTGTACAAACTCACCAAGATCATCATCGACTCCTTCAACATCCAGGGGGGAAACAACGCCCCTGACCTGCTCAACGTCATCACCGACCCTCTCACCGATGCCATCATAGAGCTGGACAAAAATGTAATCAGTGACATTGCCACCGGCGACCCAGCAGCCAGAAACAAGAGTTTGATCAAAATCTGGTGCAAAACAGAGAAAATCACGACTCTTGTGAATATAACAGTTCCCTCAGATGCCAATTGCACGACCGGTGCCCTCTGTTGGGTGGAAGGCAACAAGACATTGACCCAGATAAATGTCACTGAAACAATCAATCTAGAGAGATGCAACCATATCTTTGTTTTTGCTAACCTGCCTGACCTGGCTGTGGGCCTCATTCTGCTGGCCCTATCCCTGCTCATCCTCTGTACCTGCCTCATCCTCATTGTCAAGCTGCTCAACTCCATGCTTAAGGGACAGGTGGCTGTGGTCATCAAGAAGGTGCTCAACACAGACTTCCCTTTCCCCTTTGGCTGGGTCACTGGTTACATTGCCATCATGGTCGGAGCAGGAATGACCTTCATTGTCCAGAGCAGCTCTGTCTTCACCTCTGCAATCACTCCCCTTGTTGGTATTGGTGTTATTAGCCTTGAGAGAGCTTATCCTCTGACATTGGGCTCAAATATCGGCACAACTACCACTGCAATTCTTGCTGCTATGGCTGCTCCTGGAGAAACACTGGCCAACTCACTGCAGgttgCACTGTGCCATTTCTTCTTCAACATAGCGGGGATTCTGCTGTGGTACCCCATCCCCTTCACTCGGATCCCCATCCGCTTGGCCAGAGCCCTGGGGAACCGCACAGCAAAGTACCGTTGGTTCGCAGCGCTCTACCTCTTACTCTGCTTCCTCCTCATGCCCTTGACTATCCTGGGGCTCTCCCTGGCCGGCTGGCAAGTCCTGGTTGGGGTGGCCGTACCCATCGTTGTCCTCGCCATCTTCATCATCGTTGTTAACCTGATGCAGGCACGTTGTCCTCAGTACCTGCCCAGCGGGCTGCGTGACTGGGACTTCCTGCCCCGCCCCCTGCACTCCATGGCCCCCTGGGACCGTGTGGTGACTTCAGGCATGGCCTTCTGCGGCgctcgctgctgctgctgctgcaagtGCTGCCAGAGTACTGACGATGAAGAGAAGGGTTtgcaggagaggaagaagagtctGGAGATATATGATAACCCAGTCCTAACCAGAGACGATGAGCCGCAAGAGACCTCCAAGGAAACTATGAAAGCCACACAGCTCTAACACAGTTAACATATCCATCTGTAAGACATATATAACCTATTTGTAACATGTATGTAATTCTCCAAGTTTGCTTTGGCTTTATGGAGTTAACCAGTCTCTGTTTCGGTGATACTGTATCATGTGGTGTAAGCCTGCACATCTTGTAGGAAAACATCACCAAAACgtccactgtatatacactgagtatactaaacaataggaacacctccctaatattgaattgcaccccCTACCCCCCTGCTCtttatgacatagactgaccaggtgaatccaggtgtaaGTTATGATCTCTTATTAATATCACTTGTTAAGTCCactacaatcagtgtagatgaaggggaggttgacaggttaaagaaggatttgaagccttgagacaattgagacatgggtgaatgggaaagacaaaatattcaaatgcctttgaacggggtat

Function

NR:

description
sodium-dependent phosphate transport protein 2B isoform X1

GO: NA

KEGG:

id description
K14683 SLC34A, NPT, nptA; solute carrier family 34 (sodium-dependent phosphate cotransporter)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036969314.1 False 2338 mRNA 0.52 14 27225499 27235345
XM_021599329.2 True 2497 mRNA 0.50 13 27227320 27235345

Neighbor

gene id symbol gene type direction distance location
LOC110522773 NA coding downstream 23377 27198322 ~ 27202122 (-)
LOC110521641 LOC106584215 coding downstream 28619 27186564 ~ 27196880 (-)
LOC110521640 LOC106584214 coding downstream 44684 27157549 ~ 27180815 (-)
si:dkeyp-51f12.2 NA coding downstream 127040 27095766 ~ 27098459 (-)
bsnd bsnd coding downstream 147278 27076797 ~ 27078221 (-)
LOC110521643 cac3 coding upstream 14560 27249905 ~ 27252746 (-)
LOC110521644 LOC106584218 coding upstream 120918 27356263 ~ 27427670 (-)
LOC110521645 LOC106584222 coding upstream 210700 27446045 ~ 27457563 (-)
LOC110521648 LOC106584217 coding upstream 308807 27544152 ~ 27559964 (-)
LOC110521649 LOC106584220 coding upstream 326874 27562219 ~ 27565213 (-)
G2218467 NA non-coding downstream 22687 27202610 ~ 27202812 (-)
G2218428 NA non-coding downstream 100705 27124465 ~ 27124794 (-)
G2218421 dhcr24 non-coding downstream 102838 27121035 ~ 27122661 (-)
G2218427 NA non-coding downstream 106951 27112599 ~ 27118548 (-)
G2218517 NA non-coding upstream 14007 27249352 ~ 27249625 (-)
G2218524 NA non-coding upstream 21570 27256915 ~ 27257171 (-)
G2218619 NA non-coding upstream 91759 27327104 ~ 27327313 (-)
G2219346 NA non-coding upstream 207918 27443263 ~ 27443644 (-)
G2218118 NA other downstream 334888 26888889 ~ 26890611 (-)
G2217824 NA other downstream 884004 26268346 ~ 26341495 (-)
G2217805 prrc2c other downstream 988101 26236685 ~ 26237398 (-)
G2217605 NA other downstream 1305254 25917354 ~ 25920245 (-)
G2219594 NA other upstream 609529 27844874 ~ 27845401 (-)
G2219602 NA other upstream 628059 27863404 ~ 27864068 (-)
lnx1 lnx1 other upstream 1137951 28307617 ~ 28382340 (-)
G2221180 NA other upstream 2233298 29468643 ~ 29473675 (-)
G2223487 NA other upstream 4039375 31274720 ~ 31275143 (-)

Expression


Co-expression Network