G2219420


Basic Information

Item Value
gene id G2219420
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 27526107 ~ 27530675 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2538538
TATGAGTCAATATGTGAACTGTGTGGATATGTGTTATGGAGTTATACAAGGTCAGTACTGTACCTGCTTcacccttctctcctttctctcccttcctgccATCTCTTCCGTCTCTTCCTGGGATTCCCATATTCCCATTTTCCCCTGGAGGCCCGTTTGGGCCAGGTTTACCTGGTCTCCCTGGTAACCCCAGAGCACTGCAGATCAGACGGGGCGGAGCTCCTTTCACCTTGGCCTCCAGCTGCTGACCAATCACACACTGGCAAAGAAAAGCCACGGCCACAAACAGCCACATCCTCACCtctgtagagggagggaggcagagagagagagaaggtCGTCTTGTCCCGTCAAGTTCTACCAGCGTGTTCCCGTGTTTCCTGTGCTCTAGTTTTTGTTTTTCCTGgtcttcccagttctgacctttctgcctgtcctgaccctgatcctgcccgccgacctgtacctgcctgactctgatgtGGATTACGACCCTTTGCCTGCCTTAACTTACC

Function

NR:

description
complement C1q tumor necrosis factor-related protein 7-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2538538 True 515 lncRNA 0.53 2 27526107 27530675

Neighbor

gene id symbol gene type direction distance location
LOC110521645 LOC106584222 coding downstream 68544 27446045 ~ 27457563 (-)
LOC110521644 LOC106584218 coding downstream 98437 27356263 ~ 27427670 (-)
LOC110521643 cac3 coding downstream 273361 27249905 ~ 27252746 (-)
LOC100136211 LOC106584216 coding downstream 290762 27225499 ~ 27235345 (-)
LOC110522773 NA coding downstream 323985 27198322 ~ 27202122 (-)
LOC110521648 LOC106584217 coding upstream 13477 27544152 ~ 27559964 (-)
LOC110521649 LOC106584220 coding upstream 31544 27562219 ~ 27565213 (-)
LOC110521652 NA coding upstream 154684 27685359 ~ 27799353 (-)
LOC110521657 LOC106584104 coding upstream 326459 27857134 ~ 27948108 (-)
LOC110521660 LOC106584108 coding upstream 442469 27973144 ~ 27983258 (-)
G2219346 NA non-coding downstream 82463 27443263 ~ 27443644 (-)
G2218619 NA non-coding downstream 198794 27327104 ~ 27327313 (-)
G2218524 NA non-coding downstream 268936 27256915 ~ 27257171 (-)
G2218517 NA non-coding downstream 276482 27249352 ~ 27249625 (-)
G2219490 NA non-coding upstream 128200 27658875 ~ 27662316 (-)
G2219531 NA non-coding upstream 217707 27748382 ~ 27755005 (-)
G2219552 NA non-coding upstream 254575 27785250 ~ 27785613 (-)
G2219576 NA non-coding upstream 285823 27816498 ~ 27817067 (-)
G2219579 NA non-coding upstream 289371 27820046 ~ 27820281 (-)
LOC110521640 LOC106584214 other downstream 345719 27157549 ~ 27180815 (-)
G2218118 NA other downstream 635496 26888889 ~ 26890611 (-)
G2217824 NA other downstream 1184612 26268346 ~ 26341495 (-)
G2217805 prrc2c other downstream 1288709 26236685 ~ 26237398 (-)
G2217605 NA other downstream 1605862 25917354 ~ 25920245 (-)
G2219594 NA other upstream 314199 27844874 ~ 27845401 (-)
G2219602 NA other upstream 332729 27863404 ~ 27864068 (-)
lnx1 lnx1 other upstream 842621 28307617 ~ 28382340 (-)
G2221180 NA other upstream 1937968 29468643 ~ 29473675 (-)
G2223487 NA other upstream 3744045 31274720 ~ 31275143 (-)

Expression


Co-expression Network