XLOC_004198 (CU652893.1)


Basic Information

Item Value
gene id XLOC_004198
gene name CU652893.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 29961114 ~ 29961901 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008040
GGGTCTGGTCTTGTTGCATTTGAGAAGGATGAACTCATACAGTAATTCCAATACACCGTAAAGCCCAATGTTTTCCCTCCTGGTTGTGCGTCTCCCGATCTCCTCTGTGTCCACCTACACCATCAGTCTCTGGCTTACACCATTAGTCCACTGCTCATCCTCCTGTAATATCAAAGATTTTACCTGTTACCATATTCTCTGTCCTCATTATTATCCAATAATACACTGCCATTCATATTCAGTTCTGGCCTCAGTTCTGAACATATATATCTACTCAGTTCAGTTCTGGTCCCCCTCCTTGTGACAGTATTAAAGCTTCTCAAAAATATGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104131

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008040 True 331 lncRNA 0.42 2 29961114 29961901

Neighbor

gene id symbol gene type direction distance location
XLOC_004197 pir coding downstream 14187 29917613 ~ 29946927 (-)
XLOC_004196 vegfd coding downstream 44507 29889828 ~ 29916607 (-)
XLOC_004195 cybb coding downstream 127416 29795155 ~ 29833698 (-)
XLOC_004194 plekha3 coding downstream 193060 29756860 ~ 29768054 (-)
XLOC_004193 NA coding downstream 223867 29734578 ~ 29737247 (-)
XLOC_004199 ace2 coding upstream 19777 29981678 ~ 29996357 (-)
XLOC_004200 CR318645.1 coding upstream 139241 30101142 ~ 30101257 (-)
XLOC_004201 scml2 coding upstream 144281 30106182 ~ 30158609 (-)
XLOC_004202 cflara coding upstream 371058 30332959 ~ 30341431 (-)
XLOC_004203 tmem169a coding upstream 386372 30348273 ~ 30352333 (-)
XLOC_004063 CR854846.1 misc downstream 13833436 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 17269423 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 17339347 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 17369818 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 17447852 12512966 ~ 12513262 (-)
XLOC_004190 NA non-coding downstream 416125 29537982 ~ 29544989 (-)
XLOC_004188 NA non-coding downstream 641195 29099927 ~ 29319919 (-)
XLOC_004187 NA non-coding downstream 872488 29085366 ~ 29088626 (-)
XLOC_004183 BX649345.1 non-coding downstream 1435618 28522364 ~ 28525496 (-)
XLOC_004211 NA non-coding upstream 1238318 31200219 ~ 31202839 (-)
XLOC_004212 NA non-coding upstream 1243024 31204925 ~ 31211308 (-)
XLOC_004216 NA non-coding upstream 2188317 32150218 ~ 32157526 (-)
XLOC_004217 NA non-coding upstream 2404011 32365912 ~ 32391388 (-)

Expression


Co-expression Network