G1562


Basic Information

Item Value
gene id G1562
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4709280 ~ 4709697 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2151
ataaggtatctacatatctaatgttagtgatatgaggactgataaggtatctacatatctaatgttagtgatatgaggatgataaggtatctacatatctaatgttagtgatatgaggacagataaggtatctacatatctaatgttagtgatatgaggatgataaggtatctacatatctaatgttagtgatatgaggacagataaggtatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2151 True 214 lncRNA 0.47 3 4709280 4709697

Neighbor

gene id symbol gene type direction distance location
traf5 NA coding upstream 170620 4521099 ~ 4538660 (+)
rcor3 rcor3 coding upstream 192204 4499013 ~ 4517076 (+)
tpcn3 LOC103368820,LOC102314232 coding upstream 376380 4312607 ~ 4332900 (+)
LOC120568266 NA coding upstream 439809 4253119 ~ 4269471 (+)
pgap4 NA coding upstream 461348 4244258 ~ 4247932 (+)
zgc:172076 NA coding downstream 73656 4783353 ~ 4806707 (+)
LOC120563657 NA coding downstream 146989 4856686 ~ 4939470 (+)
LOC120563603 stxbp6 coding downstream 237961 4947658 ~ 4949112 (+)
LOC120563472 NA coding downstream 449184 5158881 ~ 5179742 (+)
LOC120563443 NA coding downstream 470499 5180196 ~ 5197117 (+)
G1493 NA non-coding upstream 188794 4520172 ~ 4520486 (+)
G1489 NA non-coding upstream 239171 4469806 ~ 4470109 (+)
G1385 NA non-coding upstream 258704 4443784 ~ 4450576 (+)
G1383 NA non-coding upstream 285026 4420462 ~ 4424254 (+)
LOC120568418 LOC106675372 non-coding upstream 370515 4336702 ~ 4338765 (+)
G1578 LOC103374759 non-coding downstream 112042 4821739 ~ 4837421 (+)
G1582 NA non-coding downstream 128399 4838096 ~ 4843291 (+)
LOC120563689 NA non-coding downstream 314333 5024030 ~ 5024922 (+)
G1612 NA non-coding downstream 358092 5067789 ~ 5071935 (+)
G1761 NA non-coding downstream 515096 5224793 ~ 5225428 (+)
G1487 LOC103369331 other upstream 248876 4455207 ~ 4460404 (+)
pex6 pex6,LOC104944420,LOC104961583 other upstream 273194 4408438 ~ 4436086 (+)
LOC120562910 NA other upstream 894710 3792746 ~ 3814570 (+)
G1191 NA other upstream 1210176 3496606 ~ 3499104 (+)
LOC120555387 LOC106675676,LOC106675675 other upstream 1229150 3468124 ~ 3480130 (+)
G1600 NA other downstream 268086 4977783 ~ 5038714 (+)
G1756 NA other downstream 508371 5218068 ~ 5222744 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other downstream 525649 5235346 ~ 5327917 (+)
G1775 NA other downstream 662920 5372617 ~ 5374907 (+)
acaa1 acaa1,LOC102793903 other downstream 677696 5387393 ~ 5471409 (+)

Expression


Co-expression Network