pgap4


Basic Information

Item Value
gene id pgap4
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4244258 ~ 4247932 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815757.1
GCTCCCAGCTTTCACTGCTGCAGGTTCTCTGAAGCAAACTGCATGCTGGGAACATCACGGTGAAGGTTGTTGTCGGCTGCGTCACCGATGCCTCGATGCCGAGCGTTCCTCGGTCAGTACCTGCGATGGTCCAACGCCGTGACCCAGGCGGCGGCGCTGTGCGTGGTCACCTTCTGCCTGGTGCTCCCCCTGTGCTGCCACCGGATGCTCTACTCCTACTTCTTCGTCCGCTCCCTCTACCTGGACTCCATGAGCGACCAGGCGCTGCAGGAGAGCCTGGACCGCGGCCGCGCCGCGCTGCTCTTCTGGCAGGGCGCCTCCGCAGCTCCTCCTCCCTCCACAGCTTCCAGATTCGGCGACGTCGCCCAGCGCCCCGAGCTGCTGGTTACCGTGGTGACGGCCAGGCGGAGTGAGGGGCGGGACTTCCACTACCTGCTCCAGGTGACTCGGCAGCTGAGCGGCCTGCTGGGGGGCTGCGGGGCGCGGCCGTGCGCCGAGGTCTTGGTCTGCGACGTGGAAAGCGGGCACCTGGAGAACCAGGACGCCAAACTGCTGGAGGCCCACTTCAGGGTGATCCGGCGTTCCCCGGCGGAGCAGCAGAGGGACGGCCGGGAGCGAGCCAACACCTTcgagagggagaagagggatTACGTCTTCTGTCTCCGCAAAGGCTGGGAGCTGGTGCAGCCCAGACACGTGATCGTCCTGGAGGACGACGCGCTGCCGAAGCCAGACTTCTTCTCCGTGGTGAAGGAGCTGCTGTCTCGCCGCTTCGCCCTGGAGACGCTCTACGTCAAGCTGTACCACCCGGAGCGGCTGCAGCGCTACTGGAACCCCGAGCCCTACCGCATCCTGGAGTGGGTGGGCCTGGGCCTGGTCGGGGCCACGGCCCTCCTGCTCGCCGCGCCGCTCTGGAACGCctgctccttctccttctcgCCGTCGGCCGGCCACCTCCTCTTCTTCACGCTCTACGTCATGGCGGCCGCCGAGCTGCTGGGGCGCCACTACCTCCTGGAGGCGCGCAGGCTCTCCCCGCAGCTCTACGCCGTCTCCCCGGCGACGGAGTGCTGCACGCCGGCCATGCTGTTCCCCGGCAACGCCTCGCTGCGGGTGGCCGAGTATCTGGACGGCTCGTTCTGCGCCAAGGGCAACGCCAAGGACATGGTTCTGTACCGGATGGCGAGGACGATCCCCGGGGAGAGGGCGCACAGCGTGGAACCCAACCTCATCACGCACATCGGGGCCTTTTCCTCGGTGAGGGCCAATCCAGCCAGGCCCAAACTCCtctgagaggggggggggggacgcaGAGCAACAAGGCTGCATTAAAGGGTCTGCGGCCCTGCAAACTGTCGGCCGGTTGGTTTGTGTCcagtaaccatagcaacgcacagagcggACCGTAAGCCGGAGACAGGcgagaggccgtaaactgtcacaagctgcagtaaaaaaaaaaacgattgaGACGCAGATTCTGAATGTGCTGTAAACACGTCCACAGAATGCCTCATAAACCTGAAAACTTCCGACATATcatcttaaccctcctgttgtcttcctgtcggccgggcaacttttagtttttctgggtcaaaatgtaaactttttttcaacgttttggacGTCTTATTTGActattttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815757.1 True 1648 mRNA 0.63 3 4244258 4247932

Neighbor

gene id symbol gene type direction distance location
psen2 psen2,LOC100710620 coding upstream 588616 3647024 ~ 3655642 (+)
LOC120562172 NA coding upstream 676248 3564722 ~ 3568010 (+)
LOC120555395 NA coding upstream 754248 3488343 ~ 3490010 (+)
rrbp1b NA coding upstream 795765 3413425 ~ 3448493 (+)
LOC120550686 LOC106676715 coding upstream 871117 3364816 ~ 3373141 (+)
LOC120568266 NA coding downstream 5187 4253119 ~ 4269471 (+)
tpcn3 LOC103368820,LOC102314232 coding downstream 64675 4312607 ~ 4332900 (+)
rcor3 rcor3 coding downstream 251081 4499013 ~ 4517076 (+)
traf5 NA coding downstream 273167 4521099 ~ 4538660 (+)
zgc:172076 NA coding downstream 535421 4783353 ~ 4806707 (+)
G1360 NA non-coding upstream 4520 4239243 ~ 4239738 (+)
G1324 NA non-coding upstream 126092 3883301 ~ 4118166 (+)
G1333 NA non-coding upstream 306594 3936749 ~ 3937664 (+)
LOC120569364 NA non-coding upstream 464255 3778708 ~ 3780003 (+)
G1233 NA non-coding upstream 498552 3745332 ~ 3745706 (+)
G1361 NA non-coding downstream 137 4248069 ~ 4251473 (+)
G1363 NA non-coding downstream 6411 4254343 ~ 4254686 (+)
G1367 NA non-coding downstream 87435 4335367 ~ 4335591 (+)
LOC120568418 LOC106675372 non-coding downstream 88770 4336702 ~ 4338765 (+)
G1383 NA non-coding downstream 172530 4420462 ~ 4424254 (+)
LOC120562910 NA other upstream 429688 3792746 ~ 3814570 (+)
G1191 NA other upstream 745154 3496606 ~ 3499104 (+)
LOC120555387 LOC106675676,LOC106675675 other upstream 764128 3468124 ~ 3480130 (+)
dzank1 NA other upstream 984500 3175601 ~ 3259758 (+)
LOC120557752 LOC104935435,LOC108250455,LOC106524354,LOC101471560,LOC103371946,LOC102291612 other upstream 1087120 3128089 ~ 3157138 (+)
pex6 pex6,LOC104944420,LOC104961583 other downstream 160506 4408438 ~ 4436086 (+)
G1487 LOC103369331 other downstream 207275 4455207 ~ 4460404 (+)
G1600 NA other downstream 729851 4977783 ~ 5038714 (+)
G1756 NA other downstream 970136 5218068 ~ 5222744 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other downstream 987414 5235346 ~ 5327917 (+)

Expression


Co-expression Network