LOC120562172


Basic Information

Item Value
gene id LOC120562172
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 3564722 ~ 3568010 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805718.1
ATGGCTGCAGATACTGTCGCTGCTCCACATTTGAGCTTGAATGTGAGATATAAGAGAAACGTCAAAGAGAACagcggagaggaagaggagaatcAGGTGGAGATCTTAGAGGATGAAGAGCATCATGCTGAACTCAAGCCACAAAGAGCCAGACCACGGAGCCCTGTAGCCAGCAACAGAAGGAGCTTCAGAGCTACTGCAGTGACTCTGGGAGGGGTTTATCTTCTGCTATTGGCTGGACTCTTCATTCGCTTCACTTTGCTGCAGACCAGATACGACCAACTGAGCAGCAACTACAGCCAGATCCAGAGGAAAGTTTTTGACATATCCATCGAAAacagtcagttgcagagcagCTACGAAACACTGAGTGTAAATCACAGTCAGTTACAGGATGAAGTAAAGCATCTGAAGACCAGAATGAAAGAGAAGCTGTGTCCTGACGGATGGACGAGATCTGGATGCAGTTGTTACTTTAAATCTGAGGAGAGGAAGTATTGGTTTGAAAGCACTTCTGACTGTAAGAAGAGAGGAGCAGATCTGGTCGTCATAAACAACGAAGAGGAACAGAAGTTTGTCGCTGAGCTGAGTAAGGATGGAGAGTTCTGCATTGGTCTATTGCAAAGACTGAGCCAAAAAGGATTGGAATGGGGATGGATCGACAATTCACCGCTGACAGAAACGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805718.1 True 687 mRNA 0.46 6 3564722 3568010

Neighbor

gene id symbol gene type direction distance location
LOC120555395 NA coding upstream 74712 3488343 ~ 3490010 (+)
rrbp1b NA coding upstream 116229 3413425 ~ 3448493 (+)
LOC120550686 LOC106676715 coding upstream 191581 3364816 ~ 3373141 (+)
LOC120557788 LOC100703858,LOC102778772,LOC103375691,LOC101465362,LOC107082671 coding upstream 405430 3157203 ~ 3159292 (+)
LOC120557776 NA coding upstream 436672 3109591 ~ 3128050 (+)
psen2 psen2,LOC100710620 coding downstream 79014 3647024 ~ 3655642 (+)
pgap4 NA coding downstream 676248 4244258 ~ 4247932 (+)
LOC120568266 NA coding downstream 685109 4253119 ~ 4269471 (+)
tpcn3 LOC103368820,LOC102314232 coding downstream 744597 4312607 ~ 4332900 (+)
rcor3 rcor3 coding downstream 931003 4499013 ~ 4517076 (+)
G1205 NA non-coding upstream 10682 3553749 ~ 3554040 (+)
G1189 NA non-coding upstream 69959 3491944 ~ 3494763 (+)
G1156 NA non-coding upstream 122544 3435944 ~ 3442178 (+)
G1146 NA non-coding upstream 161024 3400904 ~ 3403698 (+)
G1145 NA non-coding upstream 164391 3400067 ~ 3400331 (+)
G1218 NA non-coding downstream 81541 3649551 ~ 3650138 (+)
G1219 NA non-coding downstream 93842 3661852 ~ 3681929 (+)
G1222 NA non-coding downstream 97443 3665453 ~ 3669048 (+)
G1233 NA non-coding downstream 177322 3745332 ~ 3745706 (+)
LOC120569364 NA non-coding downstream 210698 3778708 ~ 3780003 (+)
G1191 NA other upstream 65618 3496606 ~ 3499104 (+)
LOC120555387 LOC106675676,LOC106675675 other upstream 84592 3468124 ~ 3480130 (+)
dzank1 NA other upstream 304964 3175601 ~ 3259758 (+)
LOC120557752 LOC104935435,LOC108250455,LOC106524354,LOC101471560,LOC103371946,LOC102291612 other upstream 407584 3128089 ~ 3157138 (+)
LOC120567073 sos1 other upstream 484532 2995029 ~ 3080190 (+)
LOC120562910 NA other downstream 224736 3792746 ~ 3814570 (+)
pex6 pex6,LOC104944420,LOC104961583 other downstream 840428 4408438 ~ 4436086 (+)
G1487 LOC103369331 other downstream 887197 4455207 ~ 4460404 (+)
G1600 NA other downstream 1409773 4977783 ~ 5038714 (+)
G1756 NA other downstream 1650058 5218068 ~ 5222744 (+)

Expression


Co-expression Network