G1489


Basic Information

Item Value
gene id G1489
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4469806 ~ 4470109 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2064
agacacacagacacacactcacacacagacacacacacacacacacacacacacacacacacacacacacacatatacacacacatatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatatatacacacacacacacatatacacacacatatacacacacacacacacacacacacacacacacacacatatatacacatacacatacacacacacacacacacacacac
>TU2066
agacacacagacacacactcacacacagacacacacacacacacacacacacacacacacacacacacacacatatacacacacatatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatatacacacacacatatacacacacatatacacacacacacacacacacacacacacacacacacatatatacacatacacatacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2064 True 278 lncRNA 0.37 2 4469806 4470109
TU2066 False 272 lncRNA 0.42 2 4469806 4470109

Neighbor

gene id symbol gene type direction distance location
tpcn3 LOC103368820,LOC102314232 coding upstream 136906 4312607 ~ 4332900 (+)
LOC120568266 NA coding upstream 200335 4253119 ~ 4269471 (+)
pgap4 NA coding upstream 221874 4244258 ~ 4247932 (+)
psen2 psen2,LOC100710620 coding upstream 814164 3647024 ~ 3655642 (+)
LOC120562172 NA coding upstream 901796 3564722 ~ 3568010 (+)
rcor3 rcor3 coding downstream 28904 4499013 ~ 4517076 (+)
traf5 NA coding downstream 50990 4521099 ~ 4538660 (+)
zgc:172076 NA coding downstream 313244 4783353 ~ 4806707 (+)
LOC120563657 NA coding downstream 386577 4856686 ~ 4939470 (+)
LOC120563603 stxbp6 coding downstream 477549 4947658 ~ 4949112 (+)
G1385 NA non-coding upstream 19230 4443784 ~ 4450576 (+)
G1383 NA non-coding upstream 45552 4420462 ~ 4424254 (+)
LOC120568418 LOC106675372 non-coding upstream 131041 4336702 ~ 4338765 (+)
G1367 NA non-coding upstream 134215 4335367 ~ 4335591 (+)
G1363 NA non-coding upstream 215120 4254343 ~ 4254686 (+)
G1493 NA non-coding downstream 50063 4520172 ~ 4520486 (+)
LOC120563678 NA non-coding downstream 238095 4708204 ~ 4710879 (+)
G1562 NA non-coding downstream 239171 4709280 ~ 4709697 (+)
G1578 LOC103374759 non-coding downstream 351630 4821739 ~ 4837421 (+)
G1582 NA non-coding downstream 367987 4838096 ~ 4843291 (+)
G1487 LOC103369331 other upstream 9402 4455207 ~ 4460404 (+)
pex6 pex6,LOC104944420,LOC104961583 other upstream 33720 4408438 ~ 4436086 (+)
LOC120562910 NA other upstream 655236 3792746 ~ 3814570 (+)
G1191 NA other upstream 970702 3496606 ~ 3499104 (+)
LOC120555387 LOC106675676,LOC106675675 other upstream 989676 3468124 ~ 3480130 (+)
G1600 NA other downstream 507674 4977783 ~ 5038714 (+)
G1756 NA other downstream 747959 5218068 ~ 5222744 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other downstream 765237 5235346 ~ 5327917 (+)
G1775 NA other downstream 902508 5372617 ~ 5374907 (+)
acaa1 acaa1,LOC102793903 other downstream 917284 5387393 ~ 5471409 (+)

Expression


Co-expression Network