G3847


Basic Information

Item Value
gene id G3847
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 12466832 ~ 12496094 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU5283
AAAAGATTATGATTATATGTTCTTAACGAGCCAACTCactgcaacaaaacaaaaacgccCACACCAGCAACAATATCAGAACGGTATAGAACACTATGTGAGGGAGAGAACAGCAGAGCTTTAATGAAGAGGAGATGTGGcatgaggagaaaaaaagatggaGGCAGAAGAGCAGTGATAGCTGGATCCAAACTGAGACCGGCTTATCCAACGAAACACGCAGATGAGTCCAATTAGAACAGAACAAGCTCATTTTCCAATGGCTAAGCATAAGCTCACATTAATGTGCAAATTTGCAGTTGCTGTGGAAACCAGAGAACTCATCTTCTCAATTTTCAGCCAAATCTGTCAATATgctttgcagtgtgtgtgtgtgtgtgtgtgtgtgtgctgtgtgagagagtgtgtgtgtgtgtgtgtgtatgtatgtgtgtgtgagagagtgtgtgtgtgtgtgtgtatgtatgtgtgtgcgtgtgtgtgtatgtagatgtgtgcatgtgtgtgtgtatgtgtgtgtgagagagtgaaagagtgagtgtgtgtgtgtgtgagtctgtgtgtgtgagagtgtctgtgtgtgtgtgtgagagtgtgtgtgagagtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgagtgagagtgtgtgtgtgtctgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5283 True 667 lncRNA 0.46 2 12466832 12496094

Neighbor

gene id symbol gene type direction distance location
ift27 ift27,LOC102778458 coding downstream 13476 12439942 ~ 12453356 (-)
LOC120565820 cuta,LOC103356700,LOC102777976 coding downstream 138196 12320596 ~ 12328636 (-)
LOC120567055 NA coding downstream 163701 12300865 ~ 12303131 (-)
LOC120562870 NA coding downstream 189748 12274686 ~ 12277084 (-)
LOC120562891 NA coding downstream 225742 12237418 ~ 12241090 (-)
LOC120543530 tmprss6 coding upstream 192834 12688928 ~ 12703781 (-)
LOC120561143 NA coding upstream 208088 12704182 ~ 12720442 (-)
LOC120561165 NA coding upstream 231807 12727901 ~ 12751429 (-)
LOC120565245 mpst,LOC102779789 coding upstream 256268 12752362 ~ 12755136 (-)
LOC120565993 LOC103371372,LOC104925466 coding upstream 303314 12799408 ~ 12802826 (-)
G3828 NA non-coding downstream 29430 12435552 ~ 12437402 (-)
G3821 NA non-coding downstream 38189 12428320 ~ 12428643 (-)
G3783 NA non-coding downstream 202826 12215455 ~ 12264006 (-)
G3781 NA non-coding downstream 211029 12207348 ~ 12255803 (-)
G3780 NA non-coding downstream 214992 12206851 ~ 12251840 (-)
LOC120558164 NA non-coding upstream 17313 12513407 ~ 12515106 (-)
G3857 NA non-coding upstream 59853 12555947 ~ 12616154 (-)
G3858 mgat3,LOC103374702,LOC103375514 non-coding upstream 106196 12602290 ~ 12607359 (-)
G3914 NA non-coding upstream 191747 12687841 ~ 12688294 (-)
G3915 NA non-coding upstream 192347 12688441 ~ 12688811 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other downstream 1473631 10966362 ~ 10993201 (-)
G3586 LOC104950333 other downstream 1561597 10899558 ~ 10905235 (-)
LOC120559237 LOC103359075 other downstream 2255528 9858080 ~ 10211304 (-)
G3373 LOC103359075 other downstream 2424828 9840590 ~ 10042004 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 2898987 9525261 ~ 9567845 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 145919 12642013 ~ 12659983 (-)
LOC120561813 NA other upstream 308408 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 364190 12860284 ~ 12860355 (-)
trnac-gca_1 NA other upstream 365600 12861694 ~ 12861765 (-)
trnac-gca_2 NA other upstream 366436 12862530 ~ 12862601 (-)

Expression


Co-expression Network