G3915


Basic Information

Item Value
gene id G3915
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 12688441 ~ 12688811 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU5367
ttatttcatggatccaggttactatgcatcctgataaagctCCCTTGGCTTTTGTAATTGAAATAGCCCCACATgatcacatacccttcatcatacctaaagattggcatggggtactttccataaatcagctctctatcatctctttatcaggatgcatattacccaggatactatgcatcctgataaagtatTTCAAGTATTTATAAGTATATTTCAagtaaaatagccccacattatcacatacccttcacaatagagattggcatggttttatttcagttagcctaatagatggtttgatttgcattgagagatgattttatggaaagtaccccatgccaatctctaggtatggtgaagggtatttG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG:

id description
ko00630 Glyoxylate and dicarboxylate metabolism
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU5367 True 371 lncRNA 0.37 1 12688441 12688811

Neighbor

gene id symbol gene type direction distance location
ift27 ift27,LOC102778458 coding downstream 235085 12439942 ~ 12453356 (-)
LOC120565820 cuta,LOC103356700,LOC102777976 coding downstream 359805 12320596 ~ 12328636 (-)
LOC120567055 NA coding downstream 385310 12300865 ~ 12303131 (-)
LOC120562870 NA coding downstream 411357 12274686 ~ 12277084 (-)
LOC120562891 NA coding downstream 447351 12237418 ~ 12241090 (-)
LOC120543530 tmprss6 coding upstream 117 12688928 ~ 12703781 (-)
LOC120561143 NA coding upstream 15371 12704182 ~ 12720442 (-)
LOC120561165 NA coding upstream 39090 12727901 ~ 12751429 (-)
LOC120565245 mpst,LOC102779789 coding upstream 63551 12752362 ~ 12755136 (-)
LOC120565993 LOC103371372,LOC104925466 coding upstream 110597 12799408 ~ 12802826 (-)
G3914 NA non-coding downstream 147 12687841 ~ 12688294 (-)
G3857 NA non-coding downstream 72287 12555947 ~ 12616154 (-)
G3858 mgat3,LOC103374702,LOC103375514 non-coding downstream 81082 12602290 ~ 12607359 (-)
LOC120558164 NA non-coding downstream 173335 12513407 ~ 12515106 (-)
G3847 NA non-coding downstream 192347 12466832 ~ 12496094 (-)
G3926 NA non-coding upstream 62944 12751755 ~ 12751976 (-)
G3929 rps19bp1,LOC102787703 non-coding upstream 67664 12756475 ~ 12759089 (-)
LOC120555888 NA non-coding upstream 74636 12763447 ~ 12767103 (-)
G3935 NA non-coding upstream 94390 12783201 ~ 12784901 (-)
G3940 NA non-coding upstream 110000 12798811 ~ 12799231 (-)
c1qtnf6b c1qtnf6,LOC103374348 other downstream 28458 12642013 ~ 12659983 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other downstream 1695240 10966362 ~ 10993201 (-)
G3586 LOC104950333 other downstream 1783206 10899558 ~ 10905235 (-)
LOC120559237 LOC103359075 other downstream 2477137 9858080 ~ 10211304 (-)
G3373 LOC103359075 other downstream 2646437 9840590 ~ 10042004 (-)
LOC120561813 NA other upstream 115691 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 171473 12860284 ~ 12860355 (-)
trnac-gca_1 NA other upstream 172883 12861694 ~ 12861765 (-)
trnac-gca_2 NA other upstream 173719 12862530 ~ 12862601 (-)
trnac-gca_3 NA other upstream 177157 12865968 ~ 12866039 (-)

Expression


Co-expression Network