G3935


Basic Information

Item Value
gene id G3935
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 12783201 ~ 12784901 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU5393
TCACTTGAATTCTGACAGATATTTATTAGAAAAAGAAGAGCAAGCATTTTTTACAAGCCATACAACTGTGCTAAGAGACTGAGCTACTCAAGACATGATCAGGTGTTATCCAGTATTAAATAACTAATATCTGCAAGCAAAGGAGGAGAGaagtaaataaacataaaaataaatccaaGTTGACAGTGTAACATCAAGAATTCATAAATAGGTTGAGGCCCCTTTCTGGACTTGAAGCTGTTAAAGAGGACAGTGGAAATGGGGTGACACTGGGTTCAAAAGGAGTGGGTAACAAGGTAGAAGTGGTCTCACTTATTGACACTGGGTTGGGGTCTGGCTGTTGACTGATGCTTTGAGTGTGAGGAAATCTCTTTTCAAAGTCTAACACTACCGGGAGCTACTGTTGACTCATGTTTTGCATGCCTAgtctacaaatacaaatatacaccCTGCCTGTTTGCCCAAGTACCGCTAGTAAGACAGAGAGTACATTTTGGGGATCTAACAATCAACTTCCAGAGTCTTTTCACTTTCATCTAGCAATTCCCTCCTTTCTGTAGCCCGTTTCATACATCCACCCTAGCATgccattttttaaaaacattttgttgtgGCATGCGAGTGTTTGAGTAGAAACGGCGCCGTCACTACACATTCTGGTTACGAAGCCACTGAACTTGTCTTGACGCGGCGCTTCCGAACTTCCTCCATCAGGTCCTTGAGATACTGAATCTCTCGGCTGATTGAGTCTGCCTTCTCCGCCAACTCATTGTTCCTCTTCTCAAGCTCGTCGCACTCGACTTGAAGTAGGTCCTTCTCGACCCGCTTCTTCTGTCTGTAGCGAGTGGCTGCCGTCTTGTTCTGCTCCATCTTCTTCAGTTTCTTCTCCACCTTGGGAGCACCAGACACCGATTTGACCCTGGAGGTCTTGGCCGAGGGGGAGGAAGCATCACAGGGCTCTGGTTTGGAGTAGGGTTTGGTCCTGGAGGAACCAGCTGCTGGAGAGGGGGCGGGAGGAGGACATGGGAGGCGGGCAGGTGAGCCGGCAACGGACTCAATGCCAGAGTCACTGTCACAGTCGCTTGATGGAGGAGATGTTTTAATGGATTGGTCAGGGTGAGGTACGAGGGAGGTCTCATCTTTACTGGTGAGCACCACAACAAAGTGGCCAGAGGTGGGAATAGAGAGCATAATGGGGTTGGTGGTCTGATAGCTTCCACTGGGATCTGGAATGATGGTGGCTGTGAGGGATGTGGCAGTTTTCTCTGCATCCAGGACATCCACTTCGCTGCCCAGCTCCAGTGTGTAGGTTGGAGAGGGAGCCGGAGAGGGGGGCTCACATTTCACAATGAGCTCTTGATCCGGAGCCACCTCGGTCTTCTTGGACTCGCCCGCTCCAGGGAGAGCGAGCtccagagggagaggggggatgCTGGGCAGTGACAGACCCAGCTCCAGGCTCCCGTGCTGGGCGGGGATGCTTGGGCCGAAGGCATCTAGATCCAGATCCATGTGGGAGTCCAGGGAGGCCAGGAGATCCTTAGGGGAGGTGGGAGACTCATCGGATGAGCAGGAGCCAATGAGGGAATCCAGGTCAAATTCACTCAGGTCGATTTTCTCTGACATCCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5393 True 1631 lncRNA 0.43 2 12783201 12784901

Neighbor

gene id symbol gene type direction distance location
LOC120565245 mpst,LOC102779789 coding downstream 28065 12752362 ~ 12755136 (-)
LOC120561165 NA coding downstream 31772 12727901 ~ 12751429 (-)
LOC120561143 NA coding downstream 62759 12704182 ~ 12720442 (-)
LOC120543530 tmprss6 coding downstream 79420 12688928 ~ 12703781 (-)
ift27 ift27,LOC102778458 coding downstream 329845 12439942 ~ 12453356 (-)
LOC120565993 LOC103371372,LOC104925466 coding upstream 14507 12799408 ~ 12802826 (-)
ncf4 ncf4 coding upstream 145231 12930132 ~ 12962722 (-)
baiap2l2b baiap2l2,LOC102782181,LOC102312770 coding upstream 192650 12977551 ~ 12989241 (-)
LOC120560412 NA coding upstream 207288 12992189 ~ 13019563 (-)
cbx6a NA coding upstream 259351 13044252 ~ 13068047 (-)
LOC120555888 NA non-coding downstream 16098 12763447 ~ 12767103 (-)
G3929 rps19bp1,LOC102787703 non-coding downstream 24112 12756475 ~ 12759089 (-)
G3926 NA non-coding downstream 31225 12751755 ~ 12751976 (-)
G3915 NA non-coding downstream 94390 12688441 ~ 12688811 (-)
G3914 NA non-coding downstream 94907 12687841 ~ 12688294 (-)
G3940 NA non-coding upstream 13910 12798811 ~ 12799231 (-)
G3995 NA non-coding upstream 273945 13058846 ~ 13065061 (-)
G4032 NA non-coding upstream 304291 13089192 ~ 13157217 (-)
LOC120567932 NA non-coding upstream 353157 13138058 ~ 13151623 (-)
LOC120567935 NA non-coding upstream 366819 13151720 ~ 13152846 (-)
c1qtnf6b c1qtnf6,LOC103374348 other downstream 123218 12642013 ~ 12659983 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other downstream 1790000 10966362 ~ 10993201 (-)
G3586 LOC104950333 other downstream 1877966 10899558 ~ 10905235 (-)
LOC120559237 LOC103359075 other downstream 2571897 9858080 ~ 10211304 (-)
G3373 LOC103359075 other downstream 2741197 9840590 ~ 10042004 (-)
LOC120561813 NA other upstream 19601 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 75383 12860284 ~ 12860355 (-)
trnac-gca_1 NA other upstream 76793 12861694 ~ 12861765 (-)
trnac-gca_2 NA other upstream 77629 12862530 ~ 12862601 (-)
trnac-gca_3 NA other upstream 81067 12865968 ~ 12866039 (-)

Expression


Co-expression Network