G4141


Basic Information

Item Value
gene id G4141
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 13542975 ~ 13682671 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU5668
AGACCTTTCCAGGACATCAGCTTTATTGTGACAGTTCATACAACCATCAAACAGCCCTCTGTAACAAGCACAAAACCTTTTCTGCTCAGCTGTTTACTAACTGTTAATGCCAGTCCTCCCGGGTACACGACGCGAGAGCCTGGAGACCCCTTCGGTAAACCCTGTGTAGCTCTGTCATACGTGTACAGGAGTGTCTGTGGTTAAATCTCAGTAGTCTTTCCTTCATTCCTCATATTTACTCCTCCCCTCCGTCTAATAAGGGAATACAAAACATCTCATTCAAACTGAACCTGTGTCATTACTGTCCGAATCCCTGTCTATAAAACCTCTATGCAGTTCTTATGTCATGTCTTGTGCCTCCTTTTGTAGCAACAGTCTGTAAATTATTTACAAATGGCCGTCTAACCTGCCCGGCTGCACACGTTTTCTGATCTTTCACCAATAGGTCatcaataattaataaaataaacttcACATCAAGAGCGAGAAGGTAAAATCAAAAGCAGACAAATTCAAAAATGATCAGTTGGGTCACTCCTCTGTCCAGATCGGCACAGCGtggccccaaaaaaataaaaataaaaataaaacaagggcGTCATTGAACACAAATAGGACCACTGCTCTGGCTATATGAATAGAGACTGAACCAACAACCATTAAGAGACCCACGTGTCACTATCCGGGCTTAATTCACAGAGAAGGGAGTTGACCTCAACCACTAAAGCACTAAATTACAGCAGCGGTCCATGTGACGGACTGGGAAGAACCCTTACCTCTCCAACATAAACAATAATACTGAAATCAAAAAATTTCAATATGCAATAAGTGAATATATTGAAATATACAACCTCCTCCATACATTTCAATATACAaatcacacatatacatatacatatatatatatatatatatatatatatatatatagtaacatatactgtactgtgtgtggtGATGAATATGTAATTTGTAACAAATGATGGGCCATTACTGACTCCTTTAATAGTGGGAAGAAGAAACAACATGTTAAGATTGTTGCTTAAATTTTATACCAATTAGCCTTTTACCTGAGTACGGGCTATTGTCTCCAaagtgaaggaaaaaaaaaaaaaacagttggtgTTAAACCTTGTGTTTTCTCACATTCACACACGTGTACTCACACCacacagaaaaaggtaaaactaAAAGGCTCGCAGAAGTACCTTTTTAAATAGCAGATATAAACACACCCAAAAGCAAGTCTTTCTGTAAAATGATAATTATCTttggagagaaagaaacaaagagagagagaaagagagagagagagagagagt
>TU5669
gggagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaaaaaaaaaatgaaaactaaagAACATCAGAGCTCCTTTCCATGTCTCCACCCATTCATGTGACGGGAGCTCGTCTCCTTCTGAAACCTTACAGAGTTTCTGGGTGGAGTGTTCCGAGGGAATGGAGAGCGTCCAACAAAgtcagtctttttttctttttctttttttgcatagcCAGACAGTGGACACGACCGCTGCAACCACTCTAAGAGTTTCAAAAGGAAAGCCGTCACTGGGGGTGGGGAGCCTTGGTCCGTGTGCACCCCTTTGTACCAGCTGGCCTGGGGATGTTTAGTGGGTCCTCCACCCCCAAAGATGGAGCTTCCCACTCACAAGGTGGACTCTTTCTGGCGCTCGCGTCCGTTACAGGTTTTCTTGACTTTGGAAATGCCCTCCAGTGCACCTGACTCAGTCAT
>TU5672
AGACCTTTCCAGGACATCAGCTTTATTGTGACAGTTCATACAACCATCAAACAGCCCTCTGTAACAAGCACAAAACCTTTTCTGCTCAGCTGTTTACTAACTGTTAATGCCAGTCCTCCCGGGTACACGACGCGAGAGCCTGGAGACCCCTTCGGTAAACCCTGTGTAGCTCTGTCATACGTGTACAGGAGTGTCTGTGGTTAAATCTCAGTAGTCTTTCCTTCATTCCTCATATTTACTCCTCCCCTCCGTCTAATAAGGGAATACAAAACATCTCATTCAAACTGAACCTGTGTCATTACTGTCCGAATCCCTGTCTATAAAACCTCTATGCAGTTCTTATGTCATGTCTTGTGCCTCCTTTTGTAGCAACAGTCTGTAAATTATTTACAAATGGCCGTCTAACCTGCCCGGCTGCACACGTTTTCTGATCTTTCACCAATAGGTCatcaataattaataaaataaacttcACATCAAGAGCGAGAAGGTAAAATCAAAAGCAGACAAATTCAAAAATGATCAGTTGGGTCACTCCTCTGTCCAGATCGGCACAGCGtggccccaaaaaaataaaaataaaaataaaacaagggcGTCATTGAACACAAATAGGACCACTGCTCTGGCTATATGAATAGAGACTGAACCAACAACCATTAAGAGACCCACGTGTCACTATCCGGGCTTAATTCACAGAGAAGGGAGTTGACCTCAACCACTAAAGCACTAAATTACAGCAGCGGTCCATGTGACGGACTGGGAAGAACCCTTACCTCTCCAACATAAACAATAATACTGAAATCAAAAAATTTCAATATGCAATAAGTGAATATATTGAAATATACAACCTCCTCCATACATTTCAATATACAaatcacacatatacatatacatatatatatatatatatatatatatatatatatagtaacatatactgtactgtgtgtggtGATGAATATGTAATTTGTAACAAATGATGGGCCATTACTGACTCCTTTAATAGTGGGAAGAAGAAACAACATGTTAAGATTGTTGCTTAAATTTTATACCAATTAGCCTTTTACCTGAGTACGGGCTATTGTCTCCAaagtgaaggaaaaaaaaaaaaaacagttggtgTTAAACCTTGTGTTTTCTCACATTCACACACGTGTACTCACACCacacagaaaaaggtaaaactaAAAGGCTCGCAGAAGTACCTTTTTAAATAGCAGATATAAACACACCCAAAAGCAAGTCTTTCTGTAAAATGATAATTATCTttggagagaaagaaacaaagagagagagaaagagagagagagaaaaaaa
>TU5673
AGACCTTTCCAGGACATCAGCTTTATTGTGACAGTTCATACAACCATCAAACAGCCCTCTGTAACAAGCACAAAACCTTTTCTGCTCAGCTGTTTACTAACTGTTAATGCCAGTCCTCCCGGGTACACGACGCGAGAGCCTGGAGACCCCTTCGGTAAACCCTGTGTAGCTCTGTCATACGTGTACAGGAGTGTCTGTGGTTAAATCTCAGTAGTCTTTCCTTCATTCCTCATATTTACTCCTCCCCTCCGTCTAATAAGGGAATACAAAACATCTCATTCAAACTGAACCTGTGTCATTACTGTCCGAATCCCTGTCTATAAAACCTCTATGCAGTTCTTATGTCATGTCTTGTGCCTCCTTTTGTAGCAACAGTCTGTAAATTATTTACAAATGGCCGTCTAACCTGCCCGGCTGCACACGTTTTCTGATCTTTCACCAATAGGTCatcaataattaataaaataaacttcACATCAAGAGCGAGAAGGTAAAATCAAAAGCAGACAAATTCAAAAATGATCAGTTGGGTCACTCCTCTGTCCAGATCGGCACAGCGtggccccaaaaaaataaaaataaaaataaaacaagggcGTCATTGAACACAAATAGGACCACTGCTCTGGCTATATGAATAGAGACTGAACCAACAACCATTAAGAGACCCACGTGTCACTATCCGGGCTTAATTCACAGAGAAGGGAGTTGACCTCAACCACTAAAGCACTAAATTACAGCAGCGGTCCATGTGACGGACTGGGAAGAACCCTTACCTCTCCAACATAAACAATAATACTGAAATCAAAAAATTTCAATATGCAATAAGTGAATATATTGAAATATACAACCTCCTCCATACATTTCAATATACAaatcacacatatacatatacatatacatatacatatacatatatacatacat
>TU5674
AGACCTTTCCAGGACATCAGCTTTATTGTGACAGTTCATACAACCATCAAACAGCCCTCTGTAACAAGCACAAAACCTTTTCTGCTCAGCTGTTTACTAACTGTTAATGCCAGTCCTCCCGGGTACACGACGCGAGAGCCTGGAGACCCCTTCGGTAAACCCTGTGTAGCTCTGTCATACGTGTACAGGAGTGTCTGTGGTTAAATCTCAGTAGTCTTTCCTTCATTCCTCATATTTACTCCTCCCCTCCGTCTAATAAGGGAATACAAAACATCTCATTCAAACTGAACCTGTGTCATTACTGTCCGAATCCCTGTCTATAAAACCTCTATGCAGTTCTTATGTCATGTCTTGTGCCTCCTTTTGTAGCAACAGTCTGTAAATTATTTACAAATGGCCGTCTAACCTGCCCGGCTGCACACGTTTTCTGATCTTTCACCAATAGGTCatcaataattaataaaataaacttcACATCAAGAGCGAGAAGGTAAAATCAAAAGCAGACAAATTCAAAAATGATCAGTTGGGTCACTCCTCTGTCCAGATCGGCACAGCGtggccccaaaaaaataaaaataaaaataaaacaagggcGTCATTGAACACAAATAGGACCACTGCTCTGGCTATATGAATAGAGACTGAACCAACAACCATTAAGAGACCCACGTGTCACTATCCGGGCTTAATTCACAGAGAAGGGAGTTGACCTCAACCACTAAAGCACTAAATTACAGCAGCGGTCCATGTGACGGACTGGGAAGAACCCTTACCTCTCCAACATAAACAATAATACTGAAATCAAAAAATTTCAATATGCAATAAGTGAATATATTGAAATATACAACCTCCTCCATACATTTCAATATACAaatcacacatatacatatacatatatatatatatatatatatatatatatatatagtaacatatactgtactgtgtgtggtGATGAATATGTAATTTGTAACAAATGATGGGCCATTACTGACTCCTTTAATAGTGGGAAGAAGAAACAACATGTTAAGATTGTTGCTTAAATTTTATACCAATTAGCCTTTTACCTGAGTACGGGCTATTGTCTCCAaagtgaaggaaaaaaaaaaaaaacagttggtgTTAAACCTTGTGTTTTCTCACATTCACACACGTGTACTCACACCacacagaaaaaggtaaaactaAAAGGCTCGCAGAAGTACCTTTTTAAATAGCAGATATAAACACACCCAAAAGCAAGTCTTTCTGTAAAATGATAATTATCTttggagagaaagaaacaaagagagagagaaaaaaaaaatgaaaactaaagAACATCAGAGCTCCTTTCCATGTCTCCACCCATTCATGTGACGGGAGCTCGTCTCCTTCTGAAACCTTACAGAGTTTCTGGGTGGAGTGTTCCGAGGGAATGGAGAGCGTCCAACAAAgtcagtctttttttctttttctttttttgcatagcCAGACAGTGGACACGACCGCTGCAACCACTCTAAGAGTTTCAAAAGGAAAGCCGTCACTGGGGGTGGGGAGCCTTGGTCCGTGTGCACCCCTTTGTACCAGCTGGCCTGGGGATGTTTAGTGGGTCCTCCACCCCCAAAGATGGAGCTTCCCACTCACAAGGTGGACTCTTTCTGGCGCTCGCGTCCGTTACAGGTTTTCTTGACTTTGGAAATGCCCTCCAGTGCACCTGACTCAGTCAT
>TU5675
gggagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaaaaaaaaaaaatgaaaactaaagAACATCAGAGCTCCTTTCCATGTCTCCACCCATTCATGTGACGGGAGCTCGTCTCCTTCTGAAACCTTACAGAGTTTCTGGGTGGAGTGTTCCGAGGGAATGGAGAGCGTCCAACAAAgtcagtctttttttctttttctttttttgcatagcCAGACAGTGGACACGACCGCTGCAACCACTCTAAGAGTTTCAAAAGGAAAGCCGTCACTGGGGGTGGGGAGCCTTGGTCCGTGTGCACCCCTTTGTACCAGCTGGCCTGGGGATGTTTAGTGGGTCCTCCACCCCCAAAGATGGAGCTTCCCACTCACAAGGTGGACTCTTTCTGGCGCTCGCGTCCGTTACAGGTTTTCTTGACTTTGGAAATGCCCTCCAGTGCACCTGACTCAGTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5668 False 1322 lncRNA 0.45 2 13608925 13682671
TU5669 False 483 lncRNA 0.35 3 13542975 13610712
TU5672 False 1320 lncRNA 0.45 2 13608925 13657374
TU5673 False 927 lncRNA 0.40 2 13608925 13663519
TU5674 True 1715 lncRNA 0.39 2 13608925 13610712
TU5675 False 485 lncRNA 0.55 3 13542975 13610712

Neighbor

gene id symbol gene type direction distance location
LOC120558207 LOC103367027 coding upstream 23464 13496641 ~ 13519511 (+)
akap8l LOC103367028 coding upstream 48466 13485259 ~ 13494509 (+)
LOC120558382 NA coding upstream 59126 13477853 ~ 13483849 (+)
LOC120567194 LOC100691221,LOC102314620,LOC103359246,LOC101486573,LOC102208321 coding upstream 299351 13232317 ~ 13243624 (+)
trnai-uau NA coding upstream 562867 12980015 ~ 12980108 (+)
LOC120558399 bfar coding downstream 188192 13870863 ~ 13882237 (+)
txndc11 txndc11 coding downstream 200188 13882859 ~ 13895119 (+)
ears2 ears2 coding downstream 311385 13994056 ~ 14002247 (+)
LOC120558534 gga2,LOC107097046 coding downstream 319977 14002648 ~ 14015551 (+)
LOC120562026 NA coding downstream 547569 14230240 ~ 14241395 (+)
G4098 LOC107104464 non-coding upstream 120134 13408732 ~ 13422841 (+)
G4008 NA non-coding upstream 386155 13101704 ~ 13156820 (+)
G3959 nptxr non-coding upstream 495538 12984788 ~ 13047437 (+)
G3913 NA non-coding upstream 710615 12831922 ~ 12832360 (+)
G3906 NA non-coding upstream 734377 12804554 ~ 12808598 (+)
G4213 NA non-coding downstream 129366 13812037 ~ 13874198 (+)
G4266 NA non-coding downstream 219973 13902644 ~ 13903742 (+)
G4279 NA non-coding downstream 243859 13926530 ~ 13927158 (+)
G4326 NA non-coding downstream 373930 14056601 ~ 14128701 (+)
G4395 NA non-coding downstream 540039 14222710 ~ 14223095 (+)
LOC120558420 LOC103367025 other upstream 6726 13521955 ~ 13536249 (+)
LOC120568539 LOC102799075,LOC104938193,LOC103359245,LOC101486854,LOC102208768 other upstream 270801 13183961 ~ 13272174 (+)
G4009 NA other upstream 404159 13107298 ~ 13138816 (+)
pla2g6 pla2g6 other upstream 452494 13072824 ~ 13090481 (+)
LOC120555899 NA other upstream 746608 12792805 ~ 12796367 (+)
LOC120558516 LOC107097044,LOC102212093,LOC108246147,LOC105919341 other downstream 215807 13898478 ~ 13901687 (+)
G4468 NA other downstream 969339 14652010 ~ 14655052 (+)
G4481 LOC105939179,LOC103372451,LOC103156473,LOC104955445 other downstream 1029018 14711689 ~ 14713213 (+)
grin2ab LOC103369342,LOC100698622,LOC102295981,LOC101467440,LOC102194499 other downstream 1470886 15153557 ~ 15263452 (+)
ccdc85al LOC108236309,LOC102779450,LOC100689955,LOC101467130,LOC103358060,LOC104952295 other downstream 2397289 16079960 ~ 16105356 (+)

Expression


Co-expression Network