G4481 (LOC105939179,LOC103372451,LOC103156473,LOC104955445)


Basic Information

Item Value
gene id G4481
gene name LOC105939179,LOC103372451,LOC103156473,LOC104955445
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14711689 ~ 14713213 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU6115
GACTATGTTGCAAATTATATTAGTTAAATAGAATTCTTTATTTGTGTAAATGCaaaagtttgtttttctgtatcCGCTTATGAAATCAAAACAGTGCAGTTTGGGTGAATCTAATTAGTCAGTTAATGGCATAACTTAAATTGAAATTGTAATTGTATTTGGTTTTATCTTGTAAAACTCAGAATATGGCAGTGTCTTGTATTCACAAATAGAATGGCAAATAGTTTTCCATCAGTCTAAAGTAGCAGAGACATTTTTGCTGAAATGAGGGTGCTTGCCACCTGAGAGAATTGACAGAGACACTGCCAGGAAAGAGTGTTTTCTGCACAGAGAGAAAGGGATTGGTGCATATAGCGTATTAACCATAATCATGAGTATGCAACCATGTTTGCTGAAAACTATCAGAAGCACTAACACAACTTCAACTGGAAggtgtataaaataaaaaaaggtaattCCAAAATAGTTGCTTTAATACATTGACAGAATTCAAAAAGTAAgtacatatacaacacacaaataaacaaggTGTAGACTCCTCTTTCAGAACCAATTAGAGTATAAGACTGAAATGTGAAGTTGTTTGGGATCGGTTGGGATAAAACAATGAAATCAGTATGTTGTCTCATAAGGGCAAACCCTACACATTTGGCACTCTGGGTAGGCTACAACTATTTCTAAAACGGTTGTATTTTAACTCAACTGGACTCAGGTGTGGTATCTACACATCCATAAGCTACAATCTCATACAGAAAAGAGAATATAGAAATGAGTTGTTTTTTGAGTAATTGTTCATTACAAAACAGATAACTGtataaacagagggaaatatggCAGCTCACAGAAGATTATCTCTTTGAAGCTGTTTTTAAGCCGAGGTAGTTTGTGGTCTACATCCTCAAGGTGTTTCACATGTGTGTATAATATATAAGTTTCTAGTTTGGTGCAACTGTCCTGCTCCTCAGACATCCACAGGTGAGGTACTTCATGACAGTCATGCTGACGTGCATTAGAGGTCCCAGGTTAAAGAGCATGTGGTAGAAGGCATGGACAGACAGGCCTCCAGTTTCATCAGCGTATTTCATCGCTACGATGGGAGTGTACAAGGGGTTGGTCAGATTACGGAAGCGCGGCCTGCTTGCTTCAATCACTTTCTTGGTACACCTGGCGATGTCGTCAGGCGTTTGTCCCAGCGTCTCAAAGATGTCAATAGAAGAAGGAAGATAGACATTCTTGAAGTAATGCACCGTATCAGGATCAGCTCCAGGAAACTCCTTCTGCTTCACTTCCTCAATCATCTTAGTCTCAAAATCTGTGCGCACTGGGCCTGGCTCGATCATCGACAATCTAATGAGAGAGACCCACAACAGAGGGGGATCATAAGAAGCATAAGAGCATTGTTAGATTG

Function

NR:

description
retinol dehydrogenase 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6115 True 1408 TUCP 0.39 2 14711689 14713213

Neighbor

gene id symbol gene type direction distance location
plk1 plk1 coding upstream 15526 14688999 ~ 14696163 (+)
LOC120563107 LOC103373374 coding upstream 27162 14683486 ~ 14684527 (+)
LOC120567678 LOC103373373,LOC104943727,LOC101061207 coding upstream 33474 14671067 ~ 14678215 (+)
LOC120567654 LOC104940897,LOC100697735,LOC102787805,LOC101469344,LOC102205566 coding upstream 101331 14601253 ~ 14610358 (+)
LOC120556593 LOC103373605,LOC102207173,LOC102788382 coding upstream 280447 14297095 ~ 14431242 (+)
LOC120555927 LOC107103001,LOC108240707 coding downstream 5336 14718549 ~ 14765454 (+)
LOC120562181 olfm2,LOC103372450,LOC101465338,LOC104921167 coding downstream 55762 14768975 ~ 14795933 (+)
LOC120562201 LOC101464850,LOC100698800,LOC102308559,LOC102198086 coding downstream 113524 14826737 ~ 14834284 (+)
LOC120557396 trip10 coding downstream 123341 14836554 ~ 14855255 (+)
LOC120565791 NA coding downstream 167899 14881112 ~ 14900161 (+)
G4457 NA non-coding upstream 44630 14600241 ~ 14667059 (+)
G4456 NA non-coding upstream 138280 14573021 ~ 14573409 (+)
G4455 NA non-coding upstream 139342 14572100 ~ 14572347 (+)
G4421 NA non-coding upstream 432829 14276507 ~ 14278860 (+)
G4410 NA non-coding upstream 462308 14248850 ~ 14249381 (+)
LOC120557406 NA non-coding downstream 154951 14868164 ~ 14872383 (+)
G4577 NA non-coding downstream 187473 14900686 ~ 14900914 (+)
G4616 LOC102799139 non-coding downstream 255966 14969179 ~ 14970733 (+)
G4620 NA non-coding downstream 281707 14994920 ~ 14995203 (+)
G4621 NA non-coding downstream 284007 14997220 ~ 14998386 (+)
G4468 NA other upstream 56637 14652010 ~ 14655052 (+)
LOC120558516 LOC107097044,LOC102212093,LOC108246147,LOC105919341 other upstream 810002 13898478 ~ 13901687 (+)
LOC120558420 LOC103367025 other upstream 1175440 13521955 ~ 13536249 (+)
LOC120568539 LOC102799075,LOC104938193,LOC103359245,LOC101486854,LOC102208768 other upstream 1439515 13183961 ~ 13272174 (+)
G4009 NA other upstream 1572873 13107298 ~ 13138816 (+)
grin2ab LOC103369342,LOC100698622,LOC102295981,LOC101467440,LOC102194499 other downstream 440344 15153557 ~ 15263452 (+)
ccdc85al LOC108236309,LOC102779450,LOC100689955,LOC101467130,LOC103358060,LOC104952295 other downstream 1366747 16079960 ~ 16105356 (+)
cep170ab LOC103358058 other downstream 1573725 16286938 ~ 16301586 (+)
zgc:175214 LOC103384011,LOC103358049,LOC102231404,LOC103131544,LOC100700402,LOC106518809,LOC104950701,LOC108236361 other downstream 1661541 16374754 ~ 16383795 (+)
atp5md NA other downstream 1689277 16402490 ~ 16403917 (+)

Expression


Co-expression Network