G4577


Basic Information

Item Value
gene id G4577
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14900686 ~ 14900914 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU6225
cttaagtacagtaattgAGTAAACACATGGATTTACTTTCCACTAATAAGACCAAAAGGCCTCAATCATTTAATACTTTTGCTAACAAAGTGTATACTCAGATGTCATTTCTGTGGTTTAAGACCATTAAAACTATTATTTGCACACTTGCAATCTTCTTCAAAGCTACAAAGTAAAGACTTAAATTAACACATAcaggggtgcctgggtagctcacctggtagagcgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6225 True 229 lncRNA 0.39 1 14900686 14900914

Neighbor

gene id symbol gene type direction distance location
LOC120565791 NA coding upstream 525 14881112 ~ 14900161 (+)
LOC120557396 trip10 coding upstream 45431 14836554 ~ 14855255 (+)
LOC120562201 LOC101464850,LOC100698800,LOC102308559,LOC102198086 coding upstream 66402 14826737 ~ 14834284 (+)
LOC120562181 olfm2,LOC103372450,LOC101465338,LOC104921167 coding upstream 104753 14768975 ~ 14795933 (+)
LOC120555927 LOC107103001,LOC108240707 coding upstream 135232 14718549 ~ 14765454 (+)
pin1 pin1 coding downstream 6588 14907502 ~ 14916680 (+)
LOC120561661 NA coding downstream 17466 14918380 ~ 14925798 (+)
LOC120567949 NA coding downstream 28691 14929605 ~ 14946010 (+)
si:ch211-14k19.8 LOC107096516,LOC104951172,LOC103365102 coding downstream 48003 14948917 ~ 14966119 (+)
LOC120568226 actb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC103365100,LOC108244554,LOC106519625 coding downstream 69968 14970882 ~ 14973160 (+)
LOC120557406 NA non-coding upstream 28303 14868164 ~ 14872383 (+)
G4457 NA non-coding upstream 233627 14600241 ~ 14667059 (+)
G4456 NA non-coding upstream 327277 14573021 ~ 14573409 (+)
G4455 NA non-coding upstream 328339 14572100 ~ 14572347 (+)
G4421 NA non-coding upstream 621826 14276507 ~ 14278860 (+)
G4616 LOC102799139 non-coding downstream 68265 14969179 ~ 14970733 (+)
G4620 NA non-coding downstream 94006 14994920 ~ 14995203 (+)
G4621 NA non-coding downstream 96306 14997220 ~ 14998386 (+)
G4637 NA non-coding downstream 152340 15053254 ~ 15054102 (+)
G4638 NA non-coding downstream 153298 15054212 ~ 15150077 (+)
G4481 LOC105939179,LOC103372451,LOC103156473,LOC104955445 other upstream 187473 14711689 ~ 14713213 (+)
G4468 NA other upstream 245634 14652010 ~ 14655052 (+)
LOC120558516 LOC107097044,LOC102212093,LOC108246147,LOC105919341 other upstream 998999 13898478 ~ 13901687 (+)
LOC120558420 LOC103367025 other upstream 1364437 13521955 ~ 13536249 (+)
LOC120568539 LOC102799075,LOC104938193,LOC103359245,LOC101486854,LOC102208768 other upstream 1628512 13183961 ~ 13272174 (+)
grin2ab LOC103369342,LOC100698622,LOC102295981,LOC101467440,LOC102194499 other downstream 252643 15153557 ~ 15263452 (+)
ccdc85al LOC108236309,LOC102779450,LOC100689955,LOC101467130,LOC103358060,LOC104952295 other downstream 1179046 16079960 ~ 16105356 (+)
cep170ab LOC103358058 other downstream 1386024 16286938 ~ 16301586 (+)
zgc:175214 LOC103384011,LOC103358049,LOC102231404,LOC103131544,LOC100700402,LOC106518809,LOC104950701,LOC108236361 other downstream 1473840 16374754 ~ 16383795 (+)
atp5md NA other downstream 1501576 16402490 ~ 16403917 (+)

Expression


Co-expression Network