LOC120561661


Basic Information

Item Value
gene id LOC120561661
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14918380 ~ 14925798 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804835.1
ATAGAAGATAAAAAGCTCCATCCTCCGTTCATGTCTGATCAAAGCTCTAGCTCTAGCTGGTTGAGATTTCGGTGACTGGAAGAGGAGCAGCCACATCAGCTTTTTGCACATTTGGAACAGACTCGACAGTCACACTGCATCTTGGGCTGGCCTGGCACACTCTCATCTCCAAAAGATATAAACATTGCAGACGTACGCGAGAAACCCTGCTGAAGAGTCTCTTTGACTGCAGCCATGCTCACCTTTTCAACCCCATCCCTTCTCTACCTGAGTCTCCTGCTCTTTCTGTCGCACCACTCGCCTGTTCTCTCCTGTCAGATTGGGAACTCCAGCCGGTGTCAGTCCGCTCCCTTTGTACCAGGCCACGACCTGGTGGGGGAGGGCTTTGACGTGGTCACCCTGCGCCGTAAAGGATCCTACGTGGTTGACGTGAAGACTTTCCTCACCCCAGCTGGCACCTGTACTCTCTGCAGGAACCCTCTACAAGGCAACAGCCTGCAGAAACTGCCAGTCTCTGCAGTGGACTGGCGCTCATTCAGCCGATGCAATGCCGACCTCTACAGCAGCGCACACACCTCTGTTAGCTCACTGATAAACACTTACACATCACAGGACAGTGACGACTGGAAGgTTGGCCTAAATGTAGATAAGTTTGTGAGTGCCGGCCTGGAGGTCGGAGGAACGCGCTCCACTGCGTATGCCTTTGCTACAGTGAGGACCAGAGAGGACCGCTACTCCTTCAGCACTCACATGGTCACCTGCAGCCATTATGGTTACCGTGTGTCCCTCAGACCGCCCCTCAGCTCCGAGTTCAGTTTGGATTTGGCCAGGCTGCCGAGTTTCTACAACTCCTCCACCAGGGCTCAGTACAGTGAGCTCATACAAACCTATGGCACACACTACATCCGCCAGGTTTACCTAGGGGGCCGACTCAGGCGAGTCACAGCTGTACGTACCTGTTTGTCCTCACTGAATGGGCTCTCCTCAAACGAGGTCCACTCCTGCCTATCACTGGGTGTTTCTGTAGGCCTGGGGAAGGTGAAATTATCCGCTAACCATCGATCTTGCTCCAAGGTCCTACAGAACCAGGACGTCTCCACCTCGTACAGCTCTGGTCTCCACCAACACTACACAGAGGTGTCAGGAGGCACTGGTTGGTTGGGGGAGTTTTCACTTACTCGTAATGACTCCCTTGGCTACAGGAATTGGCTGAAAACCCTTAAGGACCACCCGGATGTTGTTTCGTACTCACTTAGACCAATGTATGAGCTGATGCCAAATGAGACACAGAAGGCAGGGATGAAGGCGGCCATAGAGCAGTACTTACAAGACAACGCTGTGAAGAAGTCAACCAGAGAACCAGCTCTCAACAGCTGTCCTCAAAACGCCTGGAGGGGAACACTGGTGGTGACCATCGTCCGAGCCTGGGATCTGAAAGGAGATTTAACTGGCAAAACTGAAAGCTACGCTAAGATGTGGTACGGATCCTTCTATCGCAGGACTCATATGATCCGTTCAAACTACCCCAGGTGGAACGCTTGTTATTATCTGGGCAAGgtGGACACACACTTGGGTTTGAGGATGGAGGTCTGGGACGAGGACTTGAAACACGATGACCGTCTGGGTTCATGTGTGAAGTACCCGAGCCAGGGGACACACACGTTCACCTGTCCGGCCAAGAGAGGCGGCTTTGAGGTCCAGTATACTCTGACCTGCGACCCTCATCTGACTGGAGACAGGTGTAACCGTTACAAACCATCTCCACAGtgagaaatacattttttggtTCAACACAATTCTCAAATTTAAGCTGGACTCAAGTGCGATATCAGATCTGTTGATTACTTGCTTTAAGTCAATGAACCAGTCATGTATTAAGTGAAATGACTGAGGACCtcatacatttattttcctACCATTAAGACACCACAATATTAGGTTTTCTCTTTGTGGTAAAGCCTTaaaaacatttagttttggTCACATAAATTCGGTTAAATTCACATACTGACTTATATTtacttaaaaattaaaaattatcattgtgtttggtttttaacCAACTATAATTTATGCCTGTGAGCAGATATATTCTGATGTAAACATTAATAACATCAGCTACTTTGTTCTCTCACCAACTTGTGAGTGGTGAATTTTGGTGTTGCAGCATTTTACATTCGGACTGCAGACTGTGTAGCTGGTGATTTTCAAATTTCATTTGTCTCTAATCTTTCAAATTCTTTTGTCATCTTATCATGTTAATAAATACTGTCAAAACATTTGCTT
>XM_039804843.1
ATTGAGATAGAAGATAAAAAGCTCCATCCTCCGTTCATGTCTGATCAAAGCTCTAGCTCTAGCTGGTTGAGATTTCGGTGACTGGAAGAGGAGCAGCCACATCAGCTTTTTGCACATTTGGAACAGACTCGACAGTCACACTGCATCTTGGGCTGGCCTGGCACACTCTCATCTCCAAAAGATATAAACATTGCAGACGTACGCGAGAAACCCTGCTGAAGAGTCTCTTTGACTGCAGCCATGCTCACCTTTTCAACCCCATCCCTTCTCTACCTGAGTCTCCTGCTCTTTCTGTCGCACCACTCGCCTGTTCTCTCCTGTCAGATTGGGAACTCCAGCCGGTGTCAGTCCGCTCCCTTTGTACCAGGCCACGACCTGGTGGGGGAGGGCTTTGACGTGGTCACCCTGCGCCGTAAAGGATCCTACGTGGTTGACGTGAAGACTTTCCTCACCCCAGCTGGCACCTGTACTCTCTGCAGGAACCCTCTACAAGGCAACAGCCTGCAGAAACTGCCAGTCTCTGCAGTGGACTGGCGCTCATTCAGCCGATGCAATGCCGACCTCTACAGCAGCGCACACACCTCTGTTAGCTCACTGATAAACACTTACACATCACAGGACAGTGACGACTGGAAGgTTGGCCTAAATGTAGATAAGTTTGTGAGTGCCGGCCTGGAGGTCGGAGGAACGCGCTCCACTGCGTATGCCTTTGCTACAGTGAGGACCAGAGAGGACCGCTACTCCTTCAGCACTCACATGGTCACCTGCAGCCATTATGGTTACCGTGTGTCCCTCAGACCGCCCCTCAGCTCCGAGTTCAGTTTGGATTTGGCCAGGCTGCCGAGTTTCTACAACTCCTCCACCAGGGCTCAGTACAGTGAGCTCATACAAACCTATGGCACACACTACATCCGCCAGGTTTACCTAGGGGGCCGACTCAGGCGAGTCACAGCTGTACGTACCTGTTTGTCCTCACTGAATGGGCTCTCCTCAAACGAGGTCCACTCCTGCCTATCACTGGGTGTTTCTGTAGGCCTGGGGAAGGTGAAATTATCCGCTAACCATCGATCTTGCTCCAAGGTCCTACAGAACCAGGACGTCTCCACCTCGTACAGCTCTGGTCTCCACCAACACTACACAGAGGTGTCAGGAGGCACTGGTTGGTTGGGGGAGTTTTCACTTACTCGTAATGACTCCCTTGGCTACAGGAATTGGCTGAAAACCCTTAAGGACCACCCGGATGTTGTTTCGTACTCACTTAGACCAATGTATGAGCTGATGCCAAATGAGACACAGAAGGCAGGGATGAAGGCGGCCATAGAGCAGTACTTACAAGACAACGCTGTGAAGAAGTCAACCAGAGAACCAGCTCTCAACAGCTGTCCTCAAAACGCCTGGAGGGGAACACTGGTGGTGACCATCGTCCGAGCCTGGGATCTGAAAGGAGATTTAACTGGCAAAACTGAAAGCTACGCTAAGATGTGGTACGGATCCTTCTATCGCAGGACTCATATGATCCGTTCAAACTACCCCAGGTGGAACGCTTGTTATTATCTGGGCAAGgggCAGATCGCCGAGacctataaaataaaataatatcaaaTGAATTTGAAAGTGGACACAAACAGGATTTTAAGAAGTGTGGGGGGGGCATGTCCCCCCCTGTCCCCTGTGGAAATTACGCCCTAGGCTAGAAAACAATGGCCACTtctttattacaaaaaacattgCGTGGACAAGTAGCATCAAGACTTCCTGTAGAGATTAAAAACATTGTAAGAcaattaacaataataacattaaaataatagaaatattgaagaatttaaaaaagggcCATAAGTAATAAGTAAGTAAAAACATGCTGGGAATGTAAGGAATAGATAGGAatagaaatagttttttttttttttcaaagatattctttttttattattaaggtGGACACACA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804835.1 True 2286 mRNA 0.48 11 14918386 14925798
XM_039804843.1 False 1951 mRNA 0.49 11 14918380 14925080

Neighbor

gene id symbol gene type direction distance location
pin1 pin1 coding upstream 1700 14907502 ~ 14916680 (+)
LOC120565791 NA coding upstream 18219 14881112 ~ 14900161 (+)
LOC120557396 trip10 coding upstream 63125 14836554 ~ 14855255 (+)
LOC120562201 LOC101464850,LOC100698800,LOC102308559,LOC102198086 coding upstream 84096 14826737 ~ 14834284 (+)
LOC120562181 olfm2,LOC103372450,LOC101465338,LOC104921167 coding upstream 122447 14768975 ~ 14795933 (+)
LOC120567949 NA coding downstream 3807 14929605 ~ 14946010 (+)
si:ch211-14k19.8 LOC107096516,LOC104951172,LOC103365102 coding downstream 23119 14948917 ~ 14966119 (+)
LOC120568226 actb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC103365100,LOC108244554,LOC106519625 coding downstream 45084 14970882 ~ 14973160 (+)
fbxl18 fbxl18 coding downstream 79784 15005582 ~ 15012280 (+)
ptcd1 NA coding downstream 89658 15015456 ~ 15022940 (+)
G4577 NA non-coding upstream 17466 14900686 ~ 14900914 (+)
LOC120557406 NA non-coding upstream 45997 14868164 ~ 14872383 (+)
G4457 NA non-coding upstream 251321 14600241 ~ 14667059 (+)
G4456 NA non-coding upstream 344971 14573021 ~ 14573409 (+)
G4455 NA non-coding upstream 346033 14572100 ~ 14572347 (+)
G4616 LOC102799139 non-coding downstream 43381 14969179 ~ 14970733 (+)
G4620 NA non-coding downstream 69122 14994920 ~ 14995203 (+)
G4621 NA non-coding downstream 71422 14997220 ~ 14998386 (+)
G4637 NA non-coding downstream 127456 15053254 ~ 15054102 (+)
G4638 NA non-coding downstream 128414 15054212 ~ 15150077 (+)
G4481 LOC105939179,LOC103372451,LOC103156473,LOC104955445 other upstream 205167 14711689 ~ 14713213 (+)
G4468 NA other upstream 263328 14652010 ~ 14655052 (+)
LOC120558516 LOC107097044,LOC102212093,LOC108246147,LOC105919341 other upstream 1016693 13898478 ~ 13901687 (+)
LOC120558420 LOC103367025 other upstream 1382131 13521955 ~ 13536249 (+)
LOC120568539 LOC102799075,LOC104938193,LOC103359245,LOC101486854,LOC102208768 other upstream 1646206 13183961 ~ 13272174 (+)
grin2ab LOC103369342,LOC100698622,LOC102295981,LOC101467440,LOC102194499 other downstream 227759 15153557 ~ 15263452 (+)
ccdc85al LOC108236309,LOC102779450,LOC100689955,LOC101467130,LOC103358060,LOC104952295 other downstream 1154162 16079960 ~ 16105356 (+)
cep170ab LOC103358058 other downstream 1361140 16286938 ~ 16301586 (+)
zgc:175214 LOC103384011,LOC103358049,LOC102231404,LOC103131544,LOC100700402,LOC106518809,LOC104950701,LOC108236361 other downstream 1448956 16374754 ~ 16383795 (+)
atp5md NA other downstream 1476692 16402490 ~ 16403917 (+)

Expression


Co-expression Network