LOC120565791


Basic Information

Item Value
gene id LOC120565791
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14881112 ~ 14900161 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811814.1
TGTGAATGCGACTGAGAGGGTGCGTCAGAGGAAAAAGGAAGTTGCGGGATGAAGTTAAAAGTCTTTGACACAGTGCAGCGCTGCAGAACACCCACTACGGAAGAAAGGCAGAACATGAGCGCTGAAGTCTGACAACGAGATAATGAAAGGAGGAGAAAATTGAGAAAGAAGACAAGAAGAACTGCCAGGAGAAACTGAAGAAAACAAGATGGAGTTGTGGCGGCAGTGTGCGATGTGGTTGATCGACTGTCGAGTTCTTCCTGAGAACCACCGGGTCACATGGGATGGCGCACAGGTGTGTGACCTGGCTCAGGCTCTGAGAGATGGCGTGCTGCTCTGTCAGTTGCTCAACAACCTGCTACCTCAGGCCGTCAACCTGAGAGAGATCAACCTGCGGCCACAGATGtcccagttCCTGTGCCTAAAGAATATCCGGATGTTTCTGGCAGTTTGTCAGGAGAAGTTTCATCTCAGAAAGAGTGAACTGTTTGAGGCCTTTGACCTGTTTGATGTCCGAGACTTCGCAAAGGTCATAGACACTTTGTCCATCCTCTCTCATTCATCCATTGCTATACAAGGAAGACTCCAGCCCTTTCCTTTGGAAGGATGCACTCCTGATGATGAGATCTACAGCGGCCTGTCTGACAAGATAGATGACACGGTGGACGAGGATGATGACTTGTACGACTGTGTGGAGGACGAGGAGAACGAAGGAGATGAGATCTATGAAGACTTGATGAGGACGGATGAACCACCTGAAACTcAGCAGAAGGCCGGAGTAGACAAACGTGAGTGCTGCCTGCAGGAGATCAGACAGACGGAAGAGAAATACTCCGATACACTGGAATCTATATTACAGCACTTTATGAAGCCTCTTCAAAAGTTTCTCAAGGCTCCAGACATGGAGAGTATCTTTATCAACATAGAGGAATTGGCCGTCACCCATCGTAATATGTTGGAGGAGGTCCGGAGTTCCATCCTAGATTATGGAGCCAAGAACCTGTACCAGGTGTTTCTGAACTACAAGGAAAgGCTCTTACTGTACGGTCATTACTGTAGTCAGGTggaaacagcgacaaaacaccTAGACAAGCTTTCAAATATGAGAGAGGACATCAGAATGAAACTGGAGgagtGTTCAAACAGAGCAAATAGTCGACGTTTTTCTCTCAGAGATTTACTCATGGTCCCTATGCAGAGGGTCCTCAAATATCACCTGCTGTTACAGGAGCTGGTGAAGCACACCACTGACAATACAGAGAAAGACAACCTCCGCACAGCTCTTGATGCCATGAGAgacttGGCACAGTGTGTGAACGAGGTGAAGCGAGACAACGAGATCATCAAACAGATCACCACCTTCCAGTTGTCCATAGAAAACATGACTCAGTCTCTAGCTCTCTACGGTCGCCCCAAGATCGACGGAGAGCTAAAGATCTGCAGCCCGGAGAAAAAGTCCAAACAGGAcagGTATGCATTCCTCTTCGATAAGGCCATGTTTATCTGTAAGAAGAAGAGCGGAGAGACGTTTGAGCTTAAGGATACCATTGAACTACAGCACTACCAGATACGAGACGAAACCTCAGGAGAAAAGGACAATAAGAAGtggtCCCATTTGTTCCTTCTGCTGGACTGCTATGGGAGGTGTGGATACGATTTATTCTTCAAAACCCGAGAAGTGAAGAAGAAATGGCTGGAACAGTTTGAGATGGCTCTGTCAAATATGTGCCCAGATAACTCCACAGCCAACAACCACGACTTCCAGATGCACTGCTTCGAGGAAACCACTTCCTGCAAGGCCTGCTCGATGCTGTTAAGGGGGATATTTTTCCAGGGCTATCGCTGCACTCGCTGTAAAATGGCTGCACATAAAGAGTGTTTAGGCAGAGTCCCTGCCTGCGGACGAAACTCAGATCATGCCGGTACAACGAAGAAGAAAACACAGAGGTCCTCCGGACATTCCAGCATTGGATTTCCTAAGATGGAGGTGTGTCAAGAGTATTATGGCTTGCCGCCGCCCCCTGTGGGCTTCGGCCAACCGCTTCACCTCTCCAAAGGTCACATCATTGAGCTGACCCGGGCCGGTCCTGACCTGGCATGGTGGGAGGGAAGGAACCTGACTCTTGGTCAAATGGGATGGTTCCCCTGCCAAAAGGTTCAGCCCTACGTCTCTAAGCAGACTCCTGACCTGTCGGGCTTCAACTGGTTCGCAGGGAACATGGACCGAACCGCTGCCAAAAACCTGTTATTGTCCCGGTCTGATGGAACTTTCCTCGTGCGGCAGAAAGATGGAGGAGAGTTTGCTATCAGCATCAAGTTCAACATGGACATCCGACACATTAAGATCACGTCCACTGAAGGCCTGTTCCGCATCAACGAGAAGAAAGCCTTCAAGGGTTTAGTCGAGATGATTCAGTTTTACCAGCAGAACTCTTTGAAGGAATACTTCAAGGATGTGGACACCACGCTGTGTACGCCTTACAAACAACCAGAACAACAGAGCAACTCGCCTAACAACACGCCAAACCCCACACCAGGAGGCAGCGTGAATAGTTTCGGCATAGTGAGGGCCAGGTACGACTTCTCAGCCAGGGACCGCTCGGAGCTGTCGCTGCGGGAAGGAGACACCATCAAGATCCTCTCCAAGAAAGGTCACAGCGGTTGGTGGAAAGGAGAGGTGTACGGCCGGGTGGGGTTCTTTCCTGCCAACTACGTGGAGGAGGACTACTCTGAATACTGCTGACGTGGCTCCAGAGGAGATGTGTAGACCCATACTTCATGTGTGGAGGTCTACGTGATGCCTGGTTTCCATCGATTGCATTAACCCATATACACGAGTGTGGCTGTGTGAGACAGATACTGTTACTTTTGATCCAATGACTTTCTAGTGATGTTAATAAAACTTTTGTTCAGCTGA
>XM_039811823.1
gTGTGAATGCGACTGAGAGGGTGCGTCAGAGGAAAAAGGAAGTTGCGGGATGAAGTTAAAAGTCTTTGACACAGTGCAGCGCTGCAGAACACCCACTACGGAAGAAAGGCAGAACATGAGCGCTGAAGTCTGACAACGAGATAATGAAAGGAGGAGAAAATTGAGAAAGAAGACAAGAAGAACTGCCAGGAGAAACTGAAGAAAACAAGATGGAGTTGTGGCGGCAGTGTGCGATGTGGTTGATCGACTGTCGAGTTCTTCCTGAGAACCACCGGGTCACATGGGATGGCGCACAGGTGTGTGACCTGGCTCAGGCTCTGAGAGATGGCGTGCTGCTCTGTCAGTTGCTCAACAACCTGCTACCTCAGGCCGTCAACCTGAGAGAGATCAACCTGCGGCCACAGATGtcccagttCCTGTGCCTAAAGAATATCCGGATGTTTCTGGCAGTTTGTCAGGAGAAGTTTCATCTCAGAAAGAGTGAACTGTTTGAGGCCTTTGACCTGTTTGATGTCCGAGACTTCGCAAAGGTCATAGACACTTTGTCCATCCTCTCTCATTCATCCATTGCTATACAAGGAAGACTCCAGCCCTTTCCTTTGGAAGGATGCACTCCTGATGATGAGATCTACAGCGGCCTGTCTGACAAGATAGATGACACGGTGGACGAGGATGATGACTTGTACGACTGTGTGGAGGACGAGGAGAACGAAGGAGATGAGATCTATGAAGACTTGATGAGGACGGATGAACCACCTGAAACTCAGAAGGCCGGAGTAGACAAACGTGAGTGCTGCCTGCAGGAGATCAGACAGACGGAAGAGAAATACTCCGATACACTGGAATCTATATTACAGCACTTTATGAAGCCTCTTCAAAAGTTTCTCAAGGCTCCAGACATGGAGAGTATCTTTATCAACATAGAGGAATTGGCCGTCACCCATCGTAATATGTTGGAGGAGGTCCGGAGTTCCATCCTAGATTATGGAGCCAAGAACCTGTACCAGGTGTTTCTGAACTACAAGGAAAgGCTCTTACTGTACGGTCATTACTGTAGTCAGGTggaaacagcgacaaaacaccTAGACAAGCTTTCAAATATGAGAGAGGACATCAGAATGAAACTGGAGgagtGTTCAAACAGAGCAAATAGTCGACGTTTTTCTCTCAGAGATTTACTCATGGTCCCTATGCAGAGGGTCCTCAAATATCACCTGCTGTTACAGGAGCTGGTGAAGCACACCACTGACAATACAGAGAAAGACAACCTCCGCACAGCTCTTGATGCCATGAGAgacttGGCACAGTGTGTGAACGAGGTGAAGCGAGACAACGAGATCATCAAACAGATCACCACCTTCCAGTTGTCCATAGAAAACATGACTCAGTCTCTAGCTCTCTACGGTCGCCCCAAGATCGACGGAGAGCTAAAGATCTGCAGCCCGGAGAAAAAGTCCAAACAGGAcagGTATGCATTCCTCTTCGATAAGGCCATGTTTATCTGTAAGAAGAAGAGCGGAGAGACGTTTGAGCTTAAGGATACCATTGAACTACAGCACTACCAGATACGAGACGAAACCTCAGGAGAAAAGGACAATAAGAAGtggtCCCATTTGTTCCTTCTGCTGGACTGCTATGGGAGGTGTGGATACGATTTATTCTTCAAAACCCGAGAAGTGAAGAAGAAATGGCTGGAACAGTTTGAGATGGCTCTGTCAAATATGTGCCCAGATAACTCCACAGCCAACAACCACGACTTCCAGATGCACTGCTTCGAGGAAACCACTTCCTGCAAGGCCTGCTCGATGCTGTTAAGGGGGATATTTTTCCAGGGCTATCGCTGCACTCGCTGTAAAATGGCTGCACATAAAGAGTGTTTAGGCAGAGTCCCTGCCTGCGGACGAAACTCAGATCATGCCGGTACAACGAAGAAGAAAACACAGAGGTCCTCCGGACATTCCAGCATTGGATTTCCTAAGATGGAGGTGTGTCAAGAGTATTATGGCTTGCCGCCGCCCCCTGTGGGCTTCGGCCAACCGCTTCACCTCTCCAAAGGTCACATCATTGAGCTGACCCGGGCCGGTCCTGACCTGGCATGGTGGGAGGGAAGGAACCTGACTCTTGGTCAAATGGGATGGTTCCCCTGCCAAAAGGTTCAGCCCTACGTCTCTAAGCAGACTCCTGACCTGTCGGGCTTCAACTGGTTCGCAGGGAACATGGACCGAACCGCTGCCAAAAACCTGTTATTGTCCCGGTCTGATGGAACTTTCCTCGTGCGGCAGAAAGATGGAGGAGAGTTTGCTATCAGCATCAAGTTCAACATGGACATCCGACACATTAAGATCACGTCCACTGAAGGCCTGTTCCGCATCAACGAGAAGAAAGCCTTCAAGGGTTTAGTCGAGATGATTCAGTTTTACCAGCAGAACTCTTTGAAGGAATACTTCAAGGATGTGGACACCACGCTGTGTACGCCTTACAAACAACCAGAACAACAGAGCAACTCGCCTAACAACACGCCAAACCCCACACCAGGAGGCAGCGTGAATAGTTTCGGCATAGTGAGGGCCAGGTACGACTTCTCAGCCAGGGACCGCTCGGAGCTGTCGCTGCGGGAAGGAGACACCATCAAGATCCTCTCCAAGAAAGGTCACAGCGGTTGGTGGAAAGGAGAGGTGTACGGCCGGGTGGGGTTCTTTCCTGCCAACTACGTGGAGGAGGACTACTCTGAATACTGCTGACGTGGCTCCAGAGGAGATGTGTAGACCCATACTTCATGTGTGGAGGTCTACGTGATGCCTGGTTTCCATCGATTGCATTAACCCATATACACGAGTGTGGCTGTGTGAGACAGATACTGTTACTTTTGATCCAATGACTTTCTAGTGATGTTAATAAAACTTTTGTTCAGCTGA
>XM_039811832.1
GTGAATGCGACTGAGAGGGTGCGTCAGAGGAAAAAGGAAGTTGCGGGATGAAGTTAAAAGTCTTTGACACAGTGCAGCGCTGCAGAACACCCACTACGGAAGAAAGGCAGAACATGAGCGCTGAAGTCTGACAACGAGATAATGAAAGGAGGAGAAAATTGAGAAAGAAGACAAGAAGAACTGCCAGGAGAAACTGAAGAAAACAAGATGGAGTTGTGGCGGCAGTGTGCGATGTGGTTGATCGACTGTCGAGTTCTTCCTGAGAACCACCGGGTCACATGGGATGGCGCACAGGTGTGTGACCTGGCTCAGGCTCTGAGAGATGGCGTGCTGCTCTGTCAGTTGCTCAACAACCTGCTACCTCAGGCCGTCAACCTGAGAGAGATCAACCTGCGGCCACAGATGtcccagttCCTGTGCCTAAAGAATATCCGGATGTTTCTGGCAGTTTGTCAGGAGAAGTTTCATCTCAGAAAGAGTGAACTGTTTGAGGCCTTTGACCTGTTTGATGTCCGAGACTTCGCAAAGGTCATAGACACTTTGTCCATCCTCTCTCATTCATCCATTGCTATACAAGGAAGACTCCAGCCCTTTCCTTTGGAAGGATGCACTCCTGATGATGAGATCTACAGCGGCCTGTCTGACAAGATAGATGACACGGTGGACGAGGATGATGACTTGTACGACTGTGTGGAGGACGAGGAGAACGAAGGAGATGAGATCTATGAAGACTTGATGAGGACGGATGAACCACCTGAAACTcAGCAGAAGGCCGGAGTAGACAAACGTGAGTGCTGCCTGCAGGAGATCAGACAGACGGAAGAGAAATACTCCGATACACTGGAATCTATATTACAGCACTTTATGAAGCCTCTTCAAAAGTTTCTCAAGGCTCCAGACATGGAGAGTATCTTTATCAACATAGAGGAATTGGCCGTCACCCATCGTAATATGTTGGAGGAGGTCCGGAGTTCCATCCTAGATTATGGAGCCAAGAACCTGTACCAGGTGTTTCTGAACTACAAGGAAAgGCTCTTACTGTACGGTCATTACTGTAGTCAGGTggaaacagcgacaaaacaccTAGACAAGCTTTCAAATATGAGAGAGGACATCAGAATGAAACTGGAGgagtGTTCAAACAGAGCAAATAGTCGACGTTTTTCTCTCAGAGATTTACTCATGGTCCCTATGCAGAGGGTCCTCAAATATCACCTGCTGTTACAGGAGCTGGTGAAGCACACCACTGACAATACAGAGAAAGACAACCTCCGCACAGCTCTTGATGCCATGAGAgacttGGCACAGTGTGTGAACGAGGTGAAGCGAGACAACGAGATCATCAAACAGATCACCACCTTCCAGTTGTCCATAGAAAACATGACTCAGTCTCTAGCTCTCTACGGTCGCCCCAAGATCGACGGAGAGCTAAAGATCTGCAGCCCGGAGAAAAAGTCCAAACAGGAcagGTATGCATTCCTCTTCGATAAGGCCATGTTTATCTGTAAGAAGAAGAGCGGAGAGACGTTTGAGCTTAAGGATACCATTGAACTACAGCACTACCAGATACGAGACGAAACCTCAGGAGAAAAGGACAATAAGAAGtggtCCCATTTGTTCCTTCTGCTGGACTGCTATGGGAGGTGTGGATACGATTTATTCTTCAAAACCCGAGAAGTGAAGAAGAAATGGCTGGAACAGTTTGAGATGGCTCTGTCAAATATGTGCCCAGATAACTCCACAGCCAACAACCACGACTTCCAGATGCACTGCTTCGAGGAAACCACTTCCTGCAAGGCCTGCTCGATGCTGTTAAGGGGGATATTTTTCCAGGGCTATCGCTGCACTCGCTGTAAAATGGCTGCACATAAAGAGTGTTTAGGCAGAGTCCCTGCCTGCGGACGAAACTCAGATCATGCCGGTACAACGAAGAAGAAAACACAGAGGTCCTCCGGACATTCCAGCATTGGATTTCCTAAGATGGAGGGAAGGAACCTGACTCTTGGTCAAATGGGATGGTTCCCCTGCCAAAAGGTTCAGCCCTACGTCTCTAAGCAGACTCCTGACCTGTCGGGCTTCAACTGGTTCGCAGGGAACATGGACCGAACCGCTGCCAAAAACCTGTTATTGTCCCGGTCTGATGGAACTTTCCTCGTGCGGCAGAAAGATGGAGGAGAGTTTGCTATCAGCATCAAGTTCAACATGGACATCCGACACATTAAGATCACGTCCACTGAAGGCCTGTTCCGCATCAACGAGAAGAAAGCCTTCAAGGGTTTAGTCGAGATGATTCAGTTTTACCAGCAGAACTCTTTGAAGGAATACTTCAAGGATGTGGACACCACGCTGTGTACGCCTTACAAACAACCAGAACAACAGAGCAACTCGCCTAACAACACGCCAAACCCCACACCAGGAGGCAGCGTGAATAGTTTCGGCATAGTGAGGGCCAGGTACGACTTCTCAGCCAGGGACCGCTCGGAGCTGTCGCTGCGGGAAGGAGACACCATCAAGATCCTCTCCAAGAAAGGTCACAGCGGTTGGTGGAAAGGAGAGGTGTACGGCCGGGTGGGGTTCTTTCCTGCCAACTACGTGGAGGAGGACTACTCTGAATACTGCTGACGTGGCTCCAGAGGAGATGTGTAGACCCATACTTCATGTGTGGAGGTCTACGTGATGCCTGGTTTCCATCGATTGCATTAACCCATATACACGAGTGTGGCTGTGTGAGACAGATACTGTTACTTTTGATCCAATGACTTTCTAGTGATGTTAATAAAACTTTTGTTCAGCTGA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K05730 VAV; guanine nucleotide exchange factor VAV

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811814.1 True 2917 mRNA 0.49 29 14881113 14900161
XM_039811823.1 False 2915 mRNA 0.49 29 14881112 14900161
XM_039811832.1 False 2796 mRNA 0.49 29 14881114 14900161

Neighbor

gene id symbol gene type direction distance location
LOC120557396 trip10 coding upstream 25857 14836554 ~ 14855255 (+)
LOC120562201 LOC101464850,LOC100698800,LOC102308559,LOC102198086 coding upstream 46828 14826737 ~ 14834284 (+)
LOC120562181 olfm2,LOC103372450,LOC101465338,LOC104921167 coding upstream 85179 14768975 ~ 14795933 (+)
LOC120555927 LOC107103001,LOC108240707 coding upstream 115658 14718549 ~ 14765454 (+)
plk1 plk1 coding upstream 184949 14688999 ~ 14696163 (+)
pin1 pin1 coding downstream 7341 14907502 ~ 14916680 (+)
LOC120561661 NA coding downstream 18219 14918380 ~ 14925798 (+)
LOC120567949 NA coding downstream 29444 14929605 ~ 14946010 (+)
si:ch211-14k19.8 LOC107096516,LOC104951172,LOC103365102 coding downstream 48756 14948917 ~ 14966119 (+)
LOC120568226 actb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC103365100,LOC108244554,LOC106519625 coding downstream 70721 14970882 ~ 14973160 (+)
LOC120557406 NA non-coding upstream 8729 14868164 ~ 14872383 (+)
G4457 NA non-coding upstream 214053 14600241 ~ 14667059 (+)
G4456 NA non-coding upstream 307703 14573021 ~ 14573409 (+)
G4455 NA non-coding upstream 308765 14572100 ~ 14572347 (+)
G4421 NA non-coding upstream 602252 14276507 ~ 14278860 (+)
G4577 NA non-coding downstream 525 14900686 ~ 14900914 (+)
G4616 LOC102799139 non-coding downstream 69018 14969179 ~ 14970733 (+)
G4620 NA non-coding downstream 94759 14994920 ~ 14995203 (+)
G4621 NA non-coding downstream 97059 14997220 ~ 14998386 (+)
G4637 NA non-coding downstream 153093 15053254 ~ 15054102 (+)
G4481 LOC105939179,LOC103372451,LOC103156473,LOC104955445 other upstream 167899 14711689 ~ 14713213 (+)
G4468 NA other upstream 226060 14652010 ~ 14655052 (+)
LOC120558516 LOC107097044,LOC102212093,LOC108246147,LOC105919341 other upstream 979425 13898478 ~ 13901687 (+)
LOC120558420 LOC103367025 other upstream 1344863 13521955 ~ 13536249 (+)
LOC120568539 LOC102799075,LOC104938193,LOC103359245,LOC101486854,LOC102208768 other upstream 1608938 13183961 ~ 13272174 (+)
grin2ab LOC103369342,LOC100698622,LOC102295981,LOC101467440,LOC102194499 other downstream 253396 15153557 ~ 15263452 (+)
ccdc85al LOC108236309,LOC102779450,LOC100689955,LOC101467130,LOC103358060,LOC104952295 other downstream 1179799 16079960 ~ 16105356 (+)
cep170ab LOC103358058 other downstream 1386777 16286938 ~ 16301586 (+)
zgc:175214 LOC103384011,LOC103358049,LOC102231404,LOC103131544,LOC100700402,LOC106518809,LOC104950701,LOC108236361 other downstream 1474593 16374754 ~ 16383795 (+)
atp5md NA other downstream 1502329 16402490 ~ 16403917 (+)

Expression


Co-expression Network