LOC120558450


Basic Information

Item Value
gene id LOC120558450
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 13641010 ~ 13650075 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799466.1
AATCGCCTGATCATCAGCTACAGACACACTCAAAAAAAAGCACATGCATACACTCCCACACACCCATAAAAACCTAAAATACCCCGTGTGTTTTCTCAGAAGACGCAGGCCGTGTTACAGCCAGCATCGCACAGCCAGTAACTGGTGTTTGAGAGAGACGTCATATCAACAGCCAGTATTTTGGGAACCTGATGCAGGATGAGTGCATCTGGACAGCCAATCAAGGTTCTGCTGCTTTGCCTGTTCGGCTCAGCTACCTCATCCCCTGTTTCCATGCACACATCTGCTCAACCTCTTCTGTCACAAATTTTACCTCCCTCTCCAACAACCCTCGCATCTCCACCGCCTCCTTCTCTCAGTACCCCACCACCCATCCCTCCCTTCATCAGCAACTCTGGAGAGCCAACAGAAAAGGTCCGCTGCCATCTGTCGATATCACCCTCCACTATGGTGATCAGGTTCGGAGATCCAGTCACAGCTAACTGCTCTGTATCAAGGATGGATTTTTTTGCTCTTGGTTGGGCAGTCAAACTGGGAGCTACACTCAGTATGGGTCCTTTTGTGGTCTGGAGTGTGGACAAAATGACTGAGTGGAATGAGAAGCCTTCGTGCTTTGCACTATCTGAACAGGGAGGGCCATGTCACATCAATCTCACTCTAACGGTCTACAAGCCTCCAGATAGTGTGTCTATCAGCTTTGTTAATCACACTGGGGCGATGTTTGAGGGTCATCAGTACACTCTGCAGTGTACAGTACAGGACGTTGCTCCTGTTGAAAAGCTCGTTGTGACGTTCTACAGAGGACAGACATCGCTGGGTCAACCTCAGTCCAACAACAACATAGAGAAGAAACCAGTGAATGAGAGCTTCTCTTTAAACATCACACCCAGTAAAGAAGATGATGGAGTCCAGTTCTGGTGTGAAGCAAAGCTAGAACTGGGACCTGATGGACCACAGCGCCCTCCAGTGGTGACGTCAGAAAAACTCACTGCCACAGTCCTCTTTGGTCCACAGCTCGTGTGTCCTACAAAGCTGtgggtgagagagggagagaaccTCTGCTGTGAGGTGAGAGGAAATCCTCCACCGTTAGTCACCTGGTTCAGAGATGGGCAGGTGGTTGCCCTGCCCACTAACTCGAGCAGAAAGGATGCTGGGAAATACACCGTCTCAGCAAATGGACTATTTGGACAGAAAAATTTTACAGTGGAGGTGGAGTTCCTTGCTGGCAGTGGAACTACAATCAGCTGCAATAGACATTTCCTGTTGGCCGGCCTGCTTATGCAGATGATTAACTGTCTGTAAAACATCCTAAAAGAAGTCGACGTGATGTGCAATTCTTCTTTCCATGCCGTTTGGATGAATGGCTTCTAATGTGAGAAATGACTCACAAAGACTGGTTTGCTTGTGTCGCTCCTCTTTGTTTAAATGGATCAGTTTTGCATTAGTGTCTTTTTGTGGAGCTTTTTGTTCCCCTTTTTGAGAGTTTCTGCCTGGGTTTAACTGGTCTCCATGTAATCTGCACAAAAGTTAACTTTCATATCTTACAGACGGAAAGCTGCTCTAGAAAGATATACACATTGTACAATTTAATAATTCACAATCATACTGCCGTAGCTCTGTGACGCATGTTTTTTCCCCTCGCCGGTTTCTTTTCAGAGGATGTTTAAGAACCCTTTGCCAACAATCTTAATGTCTGTCCTGTGTATAGgagttttattttctgtagtATGAAGAGCTAGCCAACATTGCAAAGCACCCAGGTCTTCATTCACCAAGGTGAGGTTTAGTCTGCTGTGCAATAAAATGCTGAACTCTCGTGTCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799466.1 True 1827 mRNA 0.47 7 13641010 13650075

Neighbor

gene id symbol gene type direction distance location
LOC120558180 NA coding upstream 47202 13573107 ~ 13593808 (+)
LOC120558459 NA coding upstream 72586 13543679 ~ 13568424 (+)
LOC120558207 LOC103367027 coding upstream 121499 13496641 ~ 13519511 (+)
akap8l LOC103367028 coding upstream 146501 13485259 ~ 13494509 (+)
LOC120558382 NA coding upstream 157161 13477853 ~ 13483849 (+)
LOC120558373 LOC104926850,LOC103373325,LOC102192825,LOC101480165,LOC100695253,LOC102795131 coding downstream 24453 13674528 ~ 13680213 (+)
LOC120558399 bfar coding downstream 220788 13870863 ~ 13882237 (+)
txndc11 txndc11 coding downstream 232784 13882859 ~ 13895119 (+)
ears2 ears2 coding downstream 343981 13994056 ~ 14002247 (+)
LOC120558534 gga2,LOC107097046 coding downstream 352573 14002648 ~ 14015551 (+)
G4148 NA non-coding upstream 21177 13617369 ~ 13619833 (+)
G4098 LOC107104464 non-coding upstream 218169 13408732 ~ 13422841 (+)
G4008 NA non-coding upstream 484190 13101704 ~ 13156820 (+)
G3959 nptxr non-coding upstream 593573 12984788 ~ 13047437 (+)
G3913 NA non-coding upstream 808650 12831922 ~ 12832360 (+)
G4213 NA non-coding downstream 161962 13812037 ~ 13874198 (+)
G4266 NA non-coding downstream 252569 13902644 ~ 13903742 (+)
G4279 NA non-coding downstream 276455 13926530 ~ 13927158 (+)
G4326 NA non-coding downstream 406526 14056601 ~ 14128701 (+)
G4395 NA non-coding downstream 572635 14222710 ~ 14223095 (+)
LOC120558420 LOC103367025 other upstream 104761 13521955 ~ 13536249 (+)
LOC120568539 LOC102799075,LOC104938193,LOC103359245,LOC101486854,LOC102208768 other upstream 368836 13183961 ~ 13272174 (+)
G4009 NA other upstream 502194 13107298 ~ 13138816 (+)
pla2g6 pla2g6 other upstream 550529 13072824 ~ 13090481 (+)
LOC120555899 NA other upstream 844643 12792805 ~ 12796367 (+)
LOC120558516 LOC107097044,LOC102212093,LOC108246147,LOC105919341 other downstream 248403 13898478 ~ 13901687 (+)
G4468 NA other downstream 1001935 14652010 ~ 14655052 (+)
G4481 LOC105939179,LOC103372451,LOC103156473,LOC104955445 other downstream 1061614 14711689 ~ 14713213 (+)
grin2ab LOC103369342,LOC100698622,LOC102295981,LOC101467440,LOC102194499 other downstream 1503482 15153557 ~ 15263452 (+)
ccdc85al LOC108236309,LOC102779450,LOC100689955,LOC101467130,LOC103358060,LOC104952295 other downstream 2429885 16079960 ~ 16105356 (+)

Expression


Co-expression Network