LOC120563973


Basic Information

Item Value
gene id LOC120563973
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6120394 ~ 6127443 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808542.1
ACAGtgacgtgtgtctgtgtctgtgtgtaaataACCGTTGGTTGAGACATTTAAATAGACAGCTGTCAGAAAAGACAACGGAGCGACCACGCTGCCGGCCGTCCCAGACTGCCGCACTCGGCGCTACGATGCTGCAGCACGACTCCCCGAGGACCTCGCCGGCGTTTCTCGTCTCAAAGAAAAGACCGTCTCCGAGACCCACCGCGCCCGCGCCCGCCCTCGCTCAGAACTTCGCCGAAACGCTGCCGACGGAGATGAGCGCGAAGATCTTCGGCGAGCTGGACGCGGAGAGCCTGTGCAGCGCCGCGCGCACCTGCCGGCTGTGGCACGACATCATCGCGGAGAGCGAGCAGGTGTGGGCGAGCCAGTGTGTGCCGGTCCGAGCCGTGTGTCAGAGGGAGGTGGACGGAGACAGGCGGGACGGCCTGTCCTGGAAGgtgacCCTGGTGAAGAACTACAGGAGGAGCTGTGTGAAGAGGGACTGGCTGAGAGGGCGCTACAGCCACGTCAGGTCGGCCCAGGAGCTCAGCGGCAGGAAGATGGTGCCGCTGGACGCCGAGACCTGGGGGGAGATCCTGCAGGCCGAGCTGGACAGATGacccccccaaccccaccccacccaaccacacacacacacagaaacacacacacatgctgtactTCACGGATCTTAATTCAAAAAAGCACCTCTGGCACTTCTGAGTGCCAGATTGTAAATctcttaatatattttatactttttgtctttttatgtaaatacacacaaaacaattgtacatatatttttattttttattttaatttgttgttaatttttttttaagaaaaaaaaaggatcatgaagaaaatgaaacgatgacattatgggatggaatTATGTTGAAATCGAGCTTTTATTGCGTTGATGTAAAAACGGCCGAGATGCAATAAATAATCATTAAGAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808542.1 True 946 mRNA 0.52 3 6120394 6127443

Neighbor

gene id symbol gene type direction distance location
LOC120563868 NA coding upstream 10954 6105145 ~ 6109440 (+)
LOC120563871 NA coding upstream 26667 6088852 ~ 6093727 (+)
prokr1a LOC103383410,LOC101078632 coding upstream 61805 6039211 ~ 6058589 (+)
LOC120563910 NA coding upstream 317160 5790297 ~ 5803234 (+)
LOC120564476 NA coding upstream 512593 5606454 ~ 5607801 (+)
LOC120563935 NA coding downstream 5192 6132635 ~ 6146027 (+)
cnrip1a cnrip1,LOC102194292,LOC107094923,LOC101465016,LOC100711692,LOC106535151,LOC104918542 coding downstream 20937 6148380 ~ 6157391 (+)
ppp3r1b PPP3R1,ppp3r1,ppp3r1b,LOC101071292,LOC108441257,LOC107727894,LOC106024317,LOC107699153,LOC107594412,LOC107680167 coding downstream 35963 6163406 ~ 6232599 (+)
LOC120569490 LOC105918390 coding downstream 210860 6338303 ~ 6377691 (+)
LOC120565047 actr2,actr2a,LOC107583198,LOC104930021,LOC108423375 coding downstream 382782 6510225 ~ 6528948 (+)
G1905 NA non-coding upstream 865 6119047 ~ 6119529 (+)
G1898 NA non-coding upstream 8793 6111214 ~ 6111601 (+)
G1900 NA non-coding upstream 56757 6062128 ~ 6063637 (+)
G1825 NA non-coding upstream 89201 5982165 ~ 6031193 (+)
G1831 LOC103463036 non-coding upstream 98374 6004393 ~ 6022020 (+)
G1826 NA non-coding downstream 81312 6208755 ~ 6217056 (+)
G1915 NA non-coding downstream 106900 6234343 ~ 6288169 (+)
LOC120564462 NA non-coding downstream 130946 6258389 ~ 6261729 (+)
LOC120568420 NA non-coding downstream 134881 6262324 ~ 6265186 (+)
G1926 NA non-coding downstream 146393 6273836 ~ 6275510 (+)
snrpb2 snrpb2 other upstream 204020 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 648985 5387393 ~ 5471409 (+)
G1775 NA other upstream 745487 5372617 ~ 5374907 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other upstream 792477 5235346 ~ 5327917 (+)
G1756 NA other upstream 897650 5218068 ~ 5222744 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 258158 6385601 ~ 6402640 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other downstream 279957 6407400 ~ 6437217 (+)
G1973 NA other downstream 404998 6532441 ~ 6534370 (+)
G2530 NA other downstream 1571822 7699265 ~ 7699540 (+)
G2557 NA other downstream 1814104 7941547 ~ 7948253 (+)

Expression


Co-expression Network