LOC120567325 (LOC104941710)


Basic Information

Item Value
gene id LOC120567325
gene name LOC104941710
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 13322665 ~ 13357702 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814278.1
AAGTCTGTGCGCCCCTGAACTCTCGCGGACCTGGGTCTCTCCAACTCTCTGACAGACGGACGGAGCGGAGCGGAGCGGAGCGAGTGCGCTACAGTGATAGCATAGGCTACACCTTTTGGTTTTCGGGTGGACGCTAAACTCTGCTTCCTCACGAGAAAAAGGGTTTGAATAGTTTTTGGGGCTTTGCACAGAGAGACACGCCGACAAAGTGGATAAAAAGTTTGGGAAGAAGCTGCTCGAGCGCATTCCCGCAGACTCTGGATTACTTTACCAAGaGTTTTAGGCTGACGTCACCATGCTGCCctacttcctcctcttcttcctctcatCTGGTGTGGTGTTATCCTCCGACTGCCCAGCAGACTGTTCCTGCCAGACCCAGGGCTCGATATTCTGCATTCAACGACGCTCCAGCACTGTGCCTCGTGTCCCCACCACCACCCAACATCTATACATCTTCCAGAACGGCATCAACACTTTGTCTCAAGATGACTTCAAAGGCCTGGGGGAGTTGGAGTTGCTAGATCTGAGCCAGAATGAGCTGGCAGAGATTCCAGACAGTGTGTTTGAGATGCTCTCAAAACTGAAGAACTTAGACCTGTCCACCAACCACATTACCCACATTTCCAAAGGCAGTTTTTCTGGGTTGGTCCAGCTGGAGAGGCTGTATCTCCACGCAAACAACATTCAGAGCATACATTTGGAAGCTTTTGAGAGTTTAGAGATGCTACTGGAACTCAAGCTCCAAGGGAACCAGCTCACCTCGCTGCCATCTCTTCATTTCCCCAGGCTTCTGCTTCTAGACCTCAGCTACAACACCATCCCAACTCTGGGACCCTCAGACCTCCAGACTCCCCACCTGGAAGCCCTTAAAGTGGCCTCTCTGGGGCTTACCTCTGTGGATGAAGATCTCATAGCCTCTCTGGGGAACCTCCATGAGCTTGACATCTCCACAAACCAGTTAACTGAGGTACCCCAGGCCCTAAAGCAGGACTCCCTCAAGGGGCTGATCAAGCTCAGCCTGGCTGCCAACCCATTGGGCGAGCTCAAGGTGGAGGACTTCCAGAAACTAAGTGGACTTCAAGAACTGGATCTCAGTGGTCTTAATATTCAAGTATTTTCACAGAGTTTTTTCCAGAACTTCCCTAGGTTATTGCACCTGACAGCAGCTGAGAACCCATTTAATTGCATGTGTCCATTAGCTTGGTTCCATGTATGGCTAAAAGAGAAGGCTGTGAATCTTGGGAGGCCTGAGGAAACCAGATGTCACTTCCCTTTAGTTAATGCTGGGAAGATGCTTTCAGAACTGGAGCACAAAGATTTTGGGTGTCCACCCACCACaacagtgctgattggctccCCAATTGGAAGTACTCCTGTTACCCTGACGCCCACCACATCTCCAGAAACCATTCATACCAACgccattcctcctcctcctccacccagtGAGACAACCGTCTCCTCAAAAACAGACAGCCCTCTTTCACCAGAACCTCCAGTCTCCCCAAGCTCCACCAGCGGGGAGCTAGGGGAGCACATCTGCCCACCGAACATCTGCCTCAATGGGGGCACTTGTAATTTTGACCCATTAGGTCAACTCAGCTGTATGTGTCTGTCGGGAACCTCTGGCCTCTACTGTGAAAATGTGGATGAGGTTCCTGAGCCACCGAAACCGTCAGCAGCAGAGGTTTTGATAGTTACCCATGAGACGCCCACTGAACTTGATGCTATCAGCTCACGGCAGGTCACATCCACATCTATTCTTCTTGACCTGCACCGTTTCATCGAGACACGGCCACATATCCGTGGCATCAGGTTGACCTACCGTAACCTCTCCGGGCCTGACCGCCGCCCCATTATCCTGAGTGTACCGGCATCCTACCCTGAGTACACTTTGCGTGGTTTGAAACCCAACTGTACCTACTCAGTCTGTGCCACTCCCCTGGGTGAAAGAATCAACGCAAGGGCCAACAGCTCTGTGGAAACAGGGTCGTGTACAGAGGCTCGCACTGAAGGGGTTCAAGTGTCATCCCCAGAGTCCAGGGTGGAGACACAGAGCCCGCTGACATACACGCTCATCCTTGCCCTAGCTGCACTGGCCCTGGTGCTGGGGTTGGCTGTCGTGGCGGGGACAATTATCTGTGTCCGAAAAAGAAGACAGGCAAAGGCAGGAAAGGAGCTGGAGCTGGGCCCAGCAGATTCTGATCCCATGGAACTGGAGGGGATCAAGGCCTGCCTGGAGAATGGGGGAAATGGTACACTACCCCACAAACAGCCTGAGATTGACCGCTGTCACACTCCTCAGCTGCCTTCATCCTTGCAACAAAATGAGGGTTTGGACTATGAAGTATCCTTGATGCAAGGACACTGCCCATCAAATAACAATCTAACATCCTTAAAGCCATCTTATTTCTAAGATGCAATAAAATACTAACACTTTCTTGAGAGAGTGGGCTTGCCCATCAGGACTTGAGAGATCCTGCTATGGCTTACTTAGTGgttaaaaatcacattttcattCCAATTTCAGATATCAACAATTTGAGAAGTGGCGCTTACTATCCTTTGTTGTCCAAATGATAACACTACGGACTGGATCATCTATTTTAGAGATACTGAATGATGAATTTAAGATTACAGCATATTGGAAATGTGCTAAACCACAGTGGGGCTATGATCAGGATGTGGTTTAAAGTCATCTAGCAGAGTTTGATGGTGGTGAAACCTAACCAAGTGATATAAACTAAGTGCAATCGACTAAAAGGGTCCTAGTAGCAAACTAAATACGGAAGTGCCTTTTTGCATTGACGCAACTGTCACCAGtggctcatttaaaataaaaataaaaatctttgtttatataaaataaactatACGAATGAGCTGTAATCCTGCTGCTGGATTTGGGAGATACAGTTTGGAGAAAAGTGCCCCAGTGTTTGGGCTATAGAAATGGAGGAAGTGACCatggtttaaataaaaaacagcgATGCAGATGTGTGATGCCTGGACCACACGCCCCGGTACAAAATGGGTTTTTCGACCAACCACTCCACGGGGATTATGAATCTAACTtgcactgaaaagaaatattttttttcctttccagtGTCCCAGTCACAAACTGCCACAAGACTGATGATGGTCACATAAAGGAATGCAATAACACAAAAACTTTGAGAAAATACAAAGCTAGTAATAGGTTGATGACCATAAAAGCTGTCTAAACTTATATTGCTGTTCTCTAATTCTCTAATCTGAAACAAAACTTTTAAGTTTCTTCACATGTGGAGTTGGATTCTTCAGTGTCAACAGATTTACCATAATTCTCTCCACACATCCTGAAGCTTTTGGCTTCGTAGGAGATGAATTTGCTGTGAAAGATAAATGGACTGAATAAAGAGCCATTGAGAATGGA

Function

NR:

description
PREDICTED: vasorin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814278.1 True 3421 mRNA 0.48 2 13322665 13357702

Neighbor

gene id symbol gene type direction distance location
LOC120567925 NA coding downstream 157139 13140281 ~ 13165526 (-)
LOC120564587 NA coding downstream 207523 13098899 ~ 13115142 (-)
LOC120564607 LOC103367033 coding downstream 215715 13103809 ~ 13106950 (-)
cbx6a NA coding downstream 254618 13044252 ~ 13068047 (-)
LOC120560412 NA coding downstream 303102 12992189 ~ 13019563 (-)
LOC120564530 NA coding upstream 27109 13384811 ~ 13392035 (-)
LOC120564537 NA coding upstream 35445 13393147 ~ 13404145 (-)
LOC120568624 LOC107104464 coding upstream 51031 13408733 ~ 13415673 (-)
LOC120558389 LOC104933357,LOC103367030,LOC103383226,LOC100692841 coding upstream 70738 13428440 ~ 13474559 (-)
soul5l LOC104926857,LOC103375185,LOC100694454 coding upstream 241028 13598730 ~ 13607821 (-)
G4066 NA non-coding downstream 50491 13195046 ~ 13272174 (-)
G4032 NA non-coding downstream 165448 13089192 ~ 13157217 (-)
LOC120567935 NA non-coding downstream 169819 13151720 ~ 13152846 (-)
LOC120567932 NA non-coding downstream 171042 13138058 ~ 13151623 (-)
G3995 NA non-coding downstream 257604 13058846 ~ 13065061 (-)
G4115 LOC101079010,LOC105939483,LOC106946826,LOC103153258,LOC106910155 non-coding upstream 130218 13487920 ~ 13491997 (-)
LOC120558524 NA non-coding upstream 162299 13520001 ~ 13536248 (-)
LOC120558530 NA non-coding upstream 407491 13765193 ~ 13767856 (-)
G4354 NA non-coding upstream 687658 14045360 ~ 14045719 (-)
G4359 NA non-coding upstream 697741 14055443 ~ 14056457 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 282385 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 294272 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 456626 12865968 ~ 12866039 (-)
trnac-gca_2 NA other downstream 460064 12862530 ~ 12862601 (-)
trnac-gca_1 NA other downstream 460900 12861694 ~ 12861765 (-)
G4168 NA other upstream 174051 13531753 ~ 13567266 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other upstream 661200 14018902 ~ 14042510 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 1354442 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 1543444 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 2068842 15426544 ~ 15685639 (-)

Expression


Co-expression Network