LOC120567925


Basic Information

Item Value
gene id LOC120567925
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 13140281 ~ 13165526 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815025.1
gtcgttattcaactatgacagggtcaaatcggttttgcattctatcacccctttaaggattTGGAGACAAAATTGTCCCAGTCTTAAATATTAGGAAGTGTAGTAGAGATAAAACCTCTAGACGTAAACAGGAAATAGCTTCAGTACATATATTAGGATAACCTTTATGTTTCCAAAAAAGTAAATGACATGCCGATAAGTGATATGCTTATCCAATCAGGTGTAGAACGGCTTTATAATGACATACGGCAATACCTGTACGGCCTACTTTAAATGATGTAGGAAATCTTTTGTGCTTGTATTCAGCAGTCCTGATCAAATGAGCAGACGTATAGATCGGTGAAACTGTATACAATGTATGCCAAATAGATAGCTGCTTATGGAAATGGTGTGTAGTGAATTAAAAGAGCATCAATGTTAAGTCTGCAGCTTTTCTCTTGACACAGTTCATTTTAAAACCACAAACCAACCATATAACACTATCTTCTGATGGCCTCACATCCTGCAGCTCTCTGACAACCTTATGATGAATAGATAATGCAATTTACTTTTGCATGTTGCATAAAGACTTAGAGCCTATATAATAAGTAagaattgaaaaaaatgaataatatctatGAGAAAAGAGAGTAATGACATAATATTGTATAGCTAAAAGATAAGGTTTTCTGATGAAAATATGGCATTGTATAAAATCTAGAGAACATGGCTTCTTCACCTGTGGTTTGCCTTTACTAATAATCAGTTTAAGTGGAAGGAAGTGAAGTTGTGATGTCAGAACTGCACGCCATCTACCAACCACCTTCACTCTGATCAGTAGCCTTTAGGCTGTAAGCAAACTGCCATTAATTTGAACCACTTGGTTACATTTCTTAATTTATTTTGGGATGATTTTTTATGAATGTAGCTGTTAGTCCAATTTACAAATACTGTACAATCAACTTTCTGATTACCTGAAGGACTACAACAGCCATGTTTTTGGCAGAAGGTGACTGTGCGTTTATCATTTTCATCCTGTACATCTCAGGAGTTCATGGACGAGCAAACAGCATCTGTGCCTTAAAAGGTTCATCAGTGGATCTGCCCTGCTCAGCTCAACGTCCCACTACAACCATGAAGTGGTACACTGTACACAGGAATGGATCTAAAACTGTTCAGAAGGAGCTCTCTACAGATGAAAATCGTGTGACGTACAACATGTCTGCAGAGAGTAACTTCACTCTAACAGTCAAAGATCTGAGAGAGAGCGATGCAAATGATTACTGCTGCGGAGAGACTACTGACGACCCAGAACTCTGCTGGAACAACAAAACTGAGCTCCGTGTTGCAGGCCTGGAACTTAGGATGGATCCTGCAGAGGTGATAGAGGGTCAGAACGTCACACTGACCTGCAATACCAGCTGTCCTCTGCCTAACAACCCAATCTACACCTGGTACTTAAACAGTCAACCTCTGGACCAACCAGAGAAcctaaaaaaactgaaactagACCAATTCAGCAGTGAGAATGCAGGAAACTACTCCTGTGCTGTCAATAGCCGTACAAGTATCATTGCTTTTGGTGATATACCTCAGACTGTAAATACTGAATTGAAAAaggcagcagcagaagcagcatcAGCGGccgtagcagcagcagctgcagcaggagTCTGTGCTCTTCTCCTGGCTATCACACTTCTGGTTGTCTTCTTTTGGATTAGAAAACAGAGGGCTTCGGGTCAATCTCCTAAAGAGGAAGCAACAGACAACACGGAGCAGCTAAACCCTGATCCTGTGTATGAAAACATCTTAGCTCGACCAGCAGAGCAGGAAGAGCTTCACTATAGCAGAGTCTACTTCTCTAGGAGCCAGGCAGAACCTCTTTACTCCACCGTCCAGCCACATCAGCCCAATCGACAGGAGCATGTGGCTTATTACACCAGCATTGAATGTTTGCTCACAAAATCTTCTGTTAAAGGAGTTCATGGACGAGCAAACAGCATCTGTGCCTTAAAAGGTTCATCAGTGGATCTGCCCTGCTCAGCTCAACGTCCCACTACAACCATGAAGTGGTACACTGTACACAGGAATGGATCTAAAACTGTTCAGAAGGAGCTCTCTACAGATGAAAATCGTGTGACGTACAACATGTCTGCAGAGAGTAACTTCACTCTAACAATCAAAGATCTGAGCGAGAGCGATGCAAATGATTACTGCTGCAGAGAGACTACTGACGACCCAGAACTCTGCTGGAACAACAAAACTGAGCTCCATGTTTCAGACCTGCAGGTAAAGGTGATTCCTGccacagagggacagacagtgACACTGATGTGTAGCACCAGCTGTCCTCTGACTGAAAACCCTGCAGTCTACATCTGGTACAAGAACAGAGAGTTCCTCTATCAGGACTGGTCTCCCTGGTACCAACAGCTGGTCAGCAGTGAGAAAACAGTCACATACTCCTGTGCTATCAAAGGCTACGAGGATCTCAGAGCCCCTCAAGTCTCAGTGGATTCTGTCACGTTTTGCACCTTCAGTGTGACCTATGTTGGGAAAATGTGTTCTCGTCAGAAGAAATCAGTGGATGAGCCGTGCTCCATCACATATCCCAGAGAAGTTAATGTTGAAAGGATTGCTGCATCACTGAAGTGTACCACCAGCTGTGGTAGAAATTATGCTGAACATGACTATACGTGGTACCAGAACAGAACATTATACTCTGAAGGGAATATGCTGTCAGTATCACAGTCTAATGAAAGCTTCTCCTGTGCTGTGAAAGGCCTGCTGTCGCCTGAAGTCTGTATTGAGGATAAGAACTGCTGGAGTGTGAATTATGTCCAGAGAAGAATCTGTGCTCTGGAAGGCTCTTCAGTGAACATTTCAAGTGAATATTCTTTCCCTAACAACACTCATCCTACGTCAAAAATATGGTACAAAAAGGGCATTgggaataaagaaaaagaagaactgAGTGAGGTTGCAGGTCGTGTGGAGTATCATGACAAGAACAATCACCACATCCTAACAATCAATAACCTGAAGAAGAATGACTCAGCAGAATACACATTCAGACTCAGACATCAAGAAACATGGAAAGAGTCTGACTTTCCTGGAGTCATGTTGGTTGTCACAGGCCTGGAACTTAGGATGGATCGTGTAGAGACGAGAGAGCAGGTCACACTGACCTGCAGTACCAGCTGTCCTCTGCCTAACAACGCAATCTACACCTGGTACTTAAACAGTCGACGTCTGGACCAACCAGAGAACCCCAAAAAACTGAAACTAGACAGAGTTAGCAGTCAGGATGCAGGAAACTACTCCTGTGCTGTCAATTACGGTACAAAAATCATTAGATCTGGTGAAATAATTCTGACTGCTTTAAGTATTCAGACAGCAGCAGccgtagcagcagcagctgcagcaggagTCTGTGCTCTTCTCCTGGCTATCACACTTCTGGTTGTCTTCTTTTGGATTAGAAAACAGAGGGCTTCGGGTCAATCTCCTAAAGAGGAAGCAACAGACAACACAGAGCAGCTAAACCCTGATCCTGTGTATGAAAACATCTTAGCTCGACCAGCAGAGCAGGAAGAGCTTCACTATAGCAGAGTCTACTTCTCTAGGAGCCAGGCAGAACCTCTTTACTCCACCGTCCAGCCACATCAGCCCAATCGACAGCAGCATGTGGCTTATTACACCAGCATTGAGTGAGCATCTCTTACCATTACAACTGATTCGGGATCTACTTAGTGGCCTTACTCATCTTGATCAGTGGTAATATTTTCAACAACCAgcatttcaagttttttttccgACCTCCATTTCACTTCACTCCATGCTAATGTGGACCAGGAGATCCTTAAAAGTACTGAGCCTCCCGAGCAAAAGCTGATCACTTTGAAAAATTTGTCAGAAAAAAAGGCAGAGTGTTTCTGAAGAAGCAGTAACCACTCAGCTAGCACGGAACAGTGCATGTGCTAAAAATCTGCACAACAAAGAAACAATGTAAAAAGCGGCCTCAgtggtcagtgtaacgcttatcagttaaattttctaagcacaaacggacatt

Function

GO: NA

KEGG:

id description
ko04662 B cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815025.1 True 4057 mRNA 0.43 13 13140281 13165526

Neighbor

gene id symbol gene type direction distance location
LOC120564587 NA coding downstream 25139 13098899 ~ 13115142 (-)
LOC120564607 LOC103367033 coding downstream 33331 13103809 ~ 13106950 (-)
cbx6a NA coding downstream 72234 13044252 ~ 13068047 (-)
LOC120560412 NA coding downstream 120718 12992189 ~ 13019563 (-)
baiap2l2b baiap2l2,LOC102782181,LOC102312770 coding downstream 151040 12977551 ~ 12989241 (-)
LOC120567325 LOC104941710 coding upstream 157139 13322665 ~ 13357702 (-)
LOC120564530 NA coding upstream 219285 13384811 ~ 13392035 (-)
LOC120564537 NA coding upstream 227621 13393147 ~ 13404145 (-)
LOC120568624 LOC107104464 coding upstream 243207 13408733 ~ 13415673 (-)
LOC120558389 LOC104933357,LOC103367030,LOC103383226,LOC100692841 coding upstream 262914 13428440 ~ 13474559 (-)
G3995 NA non-coding downstream 75220 13058846 ~ 13065061 (-)
G3940 NA non-coding downstream 341050 12798811 ~ 12799231 (-)
G3935 NA non-coding downstream 355380 12783201 ~ 12784901 (-)
LOC120555888 NA non-coding downstream 373178 12763447 ~ 12767103 (-)
G3929 rps19bp1,LOC102787703 non-coding downstream 381192 12756475 ~ 12759089 (-)
G4066 NA non-coding upstream 29520 13195046 ~ 13272174 (-)
G4115 LOC101079010,LOC105939483,LOC106946826,LOC103153258,LOC106910155 non-coding upstream 322394 13487920 ~ 13491997 (-)
LOC120558524 NA non-coding upstream 354475 13520001 ~ 13536248 (-)
LOC120558530 NA non-coding upstream 599667 13765193 ~ 13767856 (-)
G4354 NA non-coding upstream 879834 14045360 ~ 14045719 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 100001 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 111888 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 274242 12865968 ~ 12866039 (-)
trnac-gca_2 NA other downstream 277680 12862530 ~ 12862601 (-)
trnac-gca_1 NA other downstream 278516 12861694 ~ 12861765 (-)
G4168 NA other upstream 366227 13531753 ~ 13567266 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other upstream 853376 14018902 ~ 14042510 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 1546618 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 1735620 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 2261018 15426544 ~ 15685639 (-)

Expression


Co-expression Network