LOC120560438 (dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416)


Basic Information

Item Value
gene id LOC120560438
gene name dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 13037270 ~ 13040280 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU5471
CGTTGTTAAAATGTCTCCTTAACAACCGAACTGGGAGTCGGGCAGCAGAAGTTTTCGGTGGAGAAACGCCTCgagTCGGAATGGCTGGGACTggtgagggaaagaaagaggaggcCGACTACAAGAGACTGCACAGCTTCCCTCTCATCAGGCATACGGACATGCCAGAGGAAATGAGGGTTGAGACCATGGAGCTTTGTGTTACAGCCTGTGAAAAATTTGCCACCAACAATgagAGTGCAGCGAAGATGATCAAAGAGTCCATGGACAAGAAATTCGGCAGCTCATGGCACGTGGTGATCGGCGAAGGTTTTGGCTTTGAGGTCACGCACGAGGTGAAGAACCTGCTCTACATGTTCTTTGGAGGGAGTCTGGCCGTGTGTGTATGGAAGTGCTCGTAGCATCTCCTCGCTGTCCCTCCTCCCCTGTGACGTGGTCACGGGGCTGGGAATGAACATTTGTGTTGCGACAGGTCAGTTTGTCCACACTACCAGCCACTGTGGCACATAATAAACAATTATTTGGAGCTCTTGTCCAGTTTTAAAAAGTGTAGTTGGCAGGGAAAAATAGTTGAAAGGGAACTTTAAAGTGCGGCAGTCACTTTGGCTGGAAGGCATACAAAAATAGCTTTCTGCCTCGTCTGTCACTtgcctttttctcttttgttttcaaCCCTCCGTCCGTCTCTGAAGCTGTATCCATGGTTCTAAACCTTTTGTGAGCGTGCATGTGCAAGTAAGTTCAACTTTTACAAACAATACAGCCAATCAGGGTCTCCAAAGTCCTTTTATCCTCATTCCTCTTCAGggagcacgtgtgtgtgtgtgtgagtttataCGTTTGTGTGTGCTGGACACACACTGTTTTTTGAAATGGCATTTCATCATCACCTTCCTCAGCAGTTTGTACAACAGTGAACTGTCCACACCATCCGTCACTTCTCACACCTTTCTCTCCAACCGCACTAATCTTTcaatacaatttttttattgaatgtaATATTTTTTATGTGTACATATTTTGAGGCGACTTGAAGAACTTCTTTTTAAAGATCAGTGTCATCTTCTTACAACTAAAGGCTCAGAGTCTCCTGAGCCAAACAACACTAAACCCGATCCACCTTTTCTCCCTCTAAAGGTGTTTGTAATAATCCCTAATAATATCACCGCACTGGGTGATATTTACAATGTGATTGTTTTCATGTTGATGACAGTTTTAATGATCCAGTGCAATGGACCATTTTGTGTGAATTGACTTGATTGTACAATAAACTCTGAAATGTGGT
>TU5472
CGTTGTTAAAATGTCTCCTTAACAACCGAACTGGGAGTCGGGCAGCAGAAGTTTTCGGTGGAGAAACGCCTCgagTCGGAATGGCTGGGACTggtgagggaaagaaagaggaggcCGACTACAAGAGACTGCACAGCTTCCCTCTCATCAGGGTAGGAGAGAAGCGGGACAGTGCCTCTGGGTACAGGACAAGAACATCCTAACTGCGGTTGGGAGCAGTCCATTCTGCAATGACAACATgaacattacattttgattgtATACCTTTGCTGTTTAGGCTGGGGTTTGGGTAGTTGTGGTGTATTAGTAGGCTGCAAATTAACTGTATATGCGTTGTGTTTGGGCAAGTGTCATTAAATATCGGTTTTAGTTTTAcgtaactgtattttttttttttgagatgtAAGAAAACTTCCCAGTGAGACAAAGTGCTACGTTGTGTGCCGATTCAGTCACCAAAACATATGCAAGTTCacaatcaaaaaaaataaataaagacaaagtCAGGCAGGGGAATGTGGACCCTtatgatttgtgtttgtcttcaGCATACGGACATGCCAGAGGAAATGAGGGTTGAGACCATGGAGCTTTGTGTTACAGCCTGTGAAAAATTTGCCACCAACAATgagAGTGCAGCGAAGATGATCAAAGAGTCCATGGACAAGAAATTCGGCAGCTCATGGCACGTGGTGATCGGCGAAGGTTTTGGCTTTGAGGTCACGCACGAGGTGAAGAACCTGCTCTACATGTTCTTTGGAGGGAGTCTGGCCGTGTGTGTATGGAAGTGCTCGTAGCATCTCCTCGCTGTCCCTCCTCCCCTGTGACGTGGTCACGGGGCTGGGAATGAACATTTGTGTTGCGACAGGTCAGTTTGTCCACACTACCAGCCACTGTGGCACATAATAAACAATTATTTGGAGCTCTTGTCCAGTTTTAAAAAGTGTAGTTGGCAGGGAAAAATAGTTGAAAGGGAACTTTAAAGTGCGGCAGTCACTTTGGCTGGAAGGCATACAAAAATAGCTTTCTGCCTCGTCTGTCACTtgcctttttctcttttgttttcaaCCCTCCGTCCGTCTCTGAAGCTGTATCCATGGTTCTAAACCTTTTGTGAGCGTGCATGTGCAAGTAAGTTCAACTTTTACAAACAATACAGCCAATCAGGGTCTCCAAAGTCCTTTTATCCTCATTCCTCTTCAGggagcacgtgtgtgtgtgtgtgagtttataCGTTTGTGTGTGCTGGACACACACTGTTTTTTGAAATGGCATTTCATCATCACCTTCCTCAGCAGTTTGTACAACAGTGAACTGTCCACACCATCCGTCACTTCTCACACCTTTCTCTCCAACCGCACTAATCTTTcaatacaatttttttattgaatgtaATATTTTTTATGTGTACATATTTTGAGGCGACTTGAAGAACTTCTTTTTAAAGATCAGTGTCATCTTCTTACAACTAAAGGCTCAGAGTCTCCTGAGCCAAACAACACTAAACCCGATCCACCTTTTCTCCCTCTAAAGGTGTTTGTAATAATCCCTAATAATATCACCGCACTGGGTGATATTTACAATGTGATTGTTTTCATGTTGATGACAGTTTTAATGATCCAGTGCAATGGACCATTTTGTGTGAATTGACTTGATTGTACAATAAACTCTGAAATGTGGT
>TU5473
CGTTGTTAAAATGTCTCCTTAACAACCGAACTGGGAGTCGGGCAGCAGAAGTTTTCGGTGGAGAAACGCCTCgagTCGGAATGGCTGGGACTggtgagggaaagaaagaggaggcCGACTACAAGAGACTGCACAGCTTCCCTCTCATCAGGatgtAAGAAAACTTCCCAGTGAGACAAAGTGCTACGTTGTGTGCCGATTCAGTCACCAAAACATATGCAAGTTCacaatcaaaaaaaataaataaagacaaagtCAGGCAGGGGAATGTGGACCCTtatgatttgtgtttgtcttcaGCATACGGACATGCCAGAGGAAATGAGGGTTGAGACCATGGAGCTTTGTGTTACAGCCTGTGAAAAATTTGCCACCAACAATgagAGTGCAGCGAAGATGATCAAAGAGTCCATGGACAAGAAATTCGGCAGCTCATGGCACGTGGTGATCGGCGAAGGTTTTGGCTTTGAGGTCACGCACGAGGTGAAGAACCTGCTCTACATGTTCTTTGGAGGGAGTCTGGCCGTGTGTGTATGGAAGTGCTCGTAGCATCTCCTCGCTGTCCCTCCTCCCCTGTGACGTGGTCACGGGGCTGGGAATGAACATTTGTGTTGCGACAGGTCAGTTTGTCCACACTACCAGCCACTGTGGCACATAATAAACAATTATTTGGAGCTCTTGTCCAGTTTTAAAAAGTGTAGTTGGCAGGGAAAAATAGTTGAAAGGGAACTTTAAAGTGCGGCAGTCACTTTGGCTGGAAGGCATACAAAAATAGCTTTCTGCCTCGTCTGTCACTtgcctttttctcttttgttttcaaCCCTCCGTCCGTCTCTGAAGCTGTATCCATGGTTCTAAACCTTTTGTGAGCGTGCATGTGCAAGTAAGTTCAACTTTTACAAACAATACAGCCAATCAGGGTCTCCAAAGTCCTTTTATCCTCATTCCTCTTCAGggagcacgtgtgtgtgtgtgtgagtttataCGTTTGTGTGTGCTGGACACACACTGTTTTTTGAAATGGCATTTCATCATCACCTTCCTCAGCAGTTTGTACAACAGTGAACTGTCCACACCATCCGTCACTTCTCACACCTTTCTCTCCAACCGCACTAATCTTTcaatacaatttttttattgaatgtaATATTTTTTATGTGTACATATTTTGAGGCGACTTGAAGAACTTCTTTTTAAAGATCAGTGTCATCTTCTTACAACTAAAGGCTCAGAGTCTCCTGAGCCAAACAACACTAAACCCGATCCACCTTTTCTCCCTCTAAAGGTGTTTGTAATAATCCCTAATAATATCACCGCACTGGGTGATATTTACAATGTGATTGTTTTCATGTTGATGACAGTTTTAATGATCCAGTGCAATGGACCATTTTGTGTGAATTGACTTGATTGTACAATAAACTCTGAAATGTGGT
>TU5474
CGTTGTTAAAATGTCTCCTTAACAACCGAACTGGGAGTCGGGCAGCAGAAGTTTTCGGTGGAGAAACGCCTCgagTCGGAATGGCTGGGACTggtgagggaaagaaagaggaggcCGACTACAAGAGACTGCACAGCTTCCCTCTCATCAGGGTAGGAGAGAAGCGGGACAGTGCCTCTGGGTACAGGACAAGAACATCCTAACTGCGCATACGGACATGCCAGAGGAAATGAGGGTTGAGACCATGGAGCTTTGTGTTACAGCCTGTGAAAAATTTGCCACCAACAATgagAGTGCAGCGAAGATGATCAAAGAGTCCATGGACAAGAAATTCGGCAGCTCATGGCACGTGGTGATCGGCGAAGGTTTTGGCTTTGAGGTCACGCACGAGGTGAAGAACCTGCTCTACATGTTCTTTGGAGGGAGTCTGGCCGTGTGTGTATGGAAGTGCTCGTAGCATCTCCTCGCTGTCCCTCCTCCCCTGTGACGTGGTCACGGGGCTGGGAATGAACATTTGTGTTGCGACAGGTCAGTTTGTCCACACTACCAGCCACTGTGGCACATAATAAACAATTATTTGGAGCTCTTGTCCAGTTTTAAAAAGTGTAGTTGGCAGGGAAAAATAGTTGAAAGGGAACTTTAAAGTGCGGCAGTCACTTTGGCTGGAAGGCATACAAAAATAGCTTTCTGCCTCGTCTGTCACTtgcctttttctcttttgttttcaaCCCTCCGTCCGTCTCTGAAGCTGTATCCATGGTTCTAAACCTTTTGTGAGCGTGCATGTGCAAGTAAGTTCAACTTTTACAAACAATACAGCCAATCAGGGTCTCCAAAGTCCTTTTATCCTCATTCCTCTTCAGggagcacgtgtgtgtgtgtgtgagtttataCGTTTGTGTGTGCTGGACACACACTGTTTTTTGAAATGGCATTTCATCATCACCTTCCTCAGCAGTTTGTACAACAGTGAACTGTCCACACCATCCGTCACTTCTCACACCTTTCTCTCCAACCGCACTAATCTTTcaatacaatttttttattgaatgtaATATTTTTTATGTGTACATATTTTGAGGCGACTTGAAGAACTTCTTTTTAAAGATCAGTGTCATCTTCTTACAACTAAAGGCTCAGAGTCTCCTGAGCCAAACAACACTAAACCCGATCCACCTTTTCTCCCTCTAAAGGTGTTTGTAATAATCCCTAATAATATCACCGCACTGGGTGATATTTACAATGTGATTGTTTTCATGTTGATGACAGTTTTAATGATCCAGTGCAATGGACCATTTTGTGTGAATTGACTTGATTGTACAATAAACTCTGAAATGTGGT
>XM_039802959.1
GACGAAGACTGGCTGTAGTGGGCGGGGTTTCCCTTGTACGGACATCCGTTGTTAAAATGTCTCCTTAACAACCGAACTGGGAGTCGGGCAGCAGAAGTTTTCGGTGGAGAAACGCCTCgagTCGGAATGGCTGGGACTggtgagggaaagaaagaggaggcCGACTACAAGAGACTGCACAGCTTCCCTCTCATCAGGCATACGGACATGCCAGAGGAAATGAGGGTTGAGACCATGGAGCTTTGTGTTACAGCCTGTGAAAAATTTGCCACCAACAATgagAGTGCAGCGAAGATGATCAAAGAGTCCATGGACAAGAAATTCGGCAGCTCATGGCACGTGGTGATCGGCGAAGGTTTTGGCTTTGAGGTCACGCACGAGGTGAAGAACCTGCTCTACATGTTCTTTGGAGGGAGTCTGGCCGTGTGTGTATGGAAGTGCTCGTAGCATCTCCTCGCTGTCCCTCCTCCCCTGTGACGTGGTCACGGGGCTGGGAATGAACATTTGTGTTGCGACAGGTCAGTTTGTCCACACTACCAGCCACTGTGGCACATAATAAACAATTATTTGGAGCTCTTGTCCAGTTTTAAAAAGTGTAGTTGGCAGGGAAAAATAGTTGAAAGGGAACTTTAAAGTGCGGCAGTCACTTTGGCTGGAAGGCATACAAAAATAGCTTTCTGCCTCGTCTGTCACTtgcctttttctcttttgttttcaaCCCTCCGTCCGTCTCTGAAGCTGTATCCATGGTTCTAAACCTTTTGTGAGCGTGCATGTGCAAGTAAGTTCAACTTTTACAAACAATACAGCCAATCAGGGTCTCCAAAGTCCTTTTATCCTCATTCCTCTTCAGggagcacgtgtgtgtgtgtgtgagtttataCGTTTGTGTGTGCTGGACACACACTGTTTTTTGAAATGGCATTTCATCATCACCTTCCTCAGCAGTTTGTACAACAGTGAACTGTCCACACCATCCGTCACTTCTCACACCTTTCTCTCCAACCGCACTAATCTTTcaatacaatttttttattgaatgtaATATTTTTTATGTGTACATATTTTGAGGCGACTTGAAGAACTTCTTTTTAAAGATCAGTGTCATCTTCTTACAACTAAAGGCTCAGAGTCTCCTGAGCCAAACAACACTAAACCCGATCCACCTTTTCTCCCTCTAAAGGTGTTTGTAATAATCCCTAATAATATCACCGCACTGGGTGATATTTACAATGTGATTGTTTTCATGTTGATGACAGTTTTAATGATCCAGTGCAATGGACCATTTTGTGTGAATTGACTTGATTGTACAATAAACTCTGAAATGTGGTGAAATAGAAA
>XM_039802969.1
ATGCCTGGTCGAGTTTACAAACAAACCGTTATCTGTCGATATCGTCTGAAGGAGGAATAGCCATTTCTGGTGTCAACTACGACGACGTACTtgttgtagctagctagcaatttAACCTCTTCCCCAGAGTCGTGTTACAAAGTgttattaacgttagctagcgttaaGTTACACAGATGTGAGCTTGCTCTTAACTACTGgagTCGGAATGGCTGGGACTggtgagggaaagaaagaggaggcCGACTACAAGAGACTGCACAGCTTCCCTCTCATCAGGCATACGGACATGCCAGAGGAAATGAGGGTTGAGACCATGGAGCTTTGTGTTACAGCCTGTGAAAAATTTGCCACCAACAATgagAGTGCAGCGAAGATGATCAAAGAGTCCATGGACAAGAAATTCGGCAGCTCATGGCACGTGGTGATCGGCGAAGGTTTTGGCTTTGAGGTCACGCACGAGGTGAAGAACCTGCTCTACATGTTCTTTGGAGGGAGTCTGGCCGTGTGTGTATGGAAGTGCTCGTAGCATCTCCTCGCTGTCCCTCCTCCCCTGTGACGTGGTCACGGGGCTGGGAATGAACATTTGTGTTGCGACAGGTCAGTTTGTCCACACTACCAGCCACTGTGGCACATAATAAACAATTATTTGGAGCTCTTGTCCAGTTTTAAAAAGTGTAGTTGGCAGGGAAAAATAGTTGAAAGGGAACTTTAAAGTGCGGCAGTCACTTTGGCTGGAAGGCATACAAAAATAGCTTTCTGCCTCGTCTGTCACTtgcctttttctcttttgttttcaaCCCTCCGTCCGTCTCTGAAGCTGTATCCATGGTTCTAAACCTTTTGTGAGCGTGCATGTGCAAGTAAGTTCAACTTTTACAAACAATACAGCCAATCAGGGTCTCCAAAGTCCTTTTATCCTCATTCCTCTTCAGggagcacgtgtgtgtgtgtgtgagtttataCGTTTGTGTGTGCTGGACACACACTGTTTTTTGAAATGGCATTTCATCATCACCTTCCTCAGCAGTTTGTACAACAGTGAACTGTCCACACCATCCGTCACTTCTCACACCTTTCTCTCCAACCGCACTAATCTTTcaatacaatttttttattgaatgtaATATTTTTTATGTGTACATATTTTGAGGCGACTTGAAGAACTTCTTTTTAAAGATCAGTGTCATCTTCTTACAACTAAAGGCTCAGAGTCTCCTGAGCCAAACAACACTAAACCCGATCCACCTTTTCTCCCTCTAAAGGTGTTTGTAATAATCCCTAATAATATCACCGCACTGGGTGATATTTACAATGTGATTGTTTTCATGTTGATGACAGTTTTAATGATCCAGTGCAATGGACCATTTTGTGTGAATTGACTTGATTGTACAATAAACTCTGAAATGTGGTGAAATAGAAA

Function

symbol description
dnal4 Enables identical protein binding activity. Predicted to be involved in microtubule-based movement. Predicted to be located in plasma membrane. Predicted to be part of dynein complex. Implicated in congenital mirror movement disorder.

NR:

description
PREDICTED: dynein light chain 4, axonemal isoform X3

GO:

id name namespace
GO:0007017 microtubule-based process biological_process
GO:0005875 microtubule associated complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5471 False 1285 TUCP 0.44 4 13037280 13040234
TU5472 True 1681 TUCP 0.43 3 13037280 13040234
TU5473 False 1433 TUCP 0.44 4 13037280 13040234
TU5474 False 1341 lncRNA 0.45 4 13037280 13040234
XM_039802959.1 False 1341 mRNA 0.45 4 13037270 13040280
XM_039802969.1 False 1423 mRNA 0.44 4 13037270 13039959

Neighbor

gene id symbol gene type direction distance location
LOC120560412 NA coding downstream 17707 12992189 ~ 13019563 (-)
baiap2l2b baiap2l2,LOC102782181,LOC102312770 coding downstream 48029 12977551 ~ 12989241 (-)
ncf4 ncf4 coding downstream 74548 12930132 ~ 12962722 (-)
LOC120565993 LOC103371372,LOC104925466 coding downstream 234444 12799408 ~ 12802826 (-)
LOC120565245 mpst,LOC102779789 coding downstream 282134 12752362 ~ 12755136 (-)
cbx6a NA coding upstream 3972 13044252 ~ 13068047 (-)
LOC120564587 NA coding upstream 58619 13098899 ~ 13115142 (-)
LOC120564607 LOC103367033 coding upstream 63529 13103809 ~ 13106950 (-)
LOC120567925 NA coding upstream 100001 13140281 ~ 13165526 (-)
LOC120567325 LOC104941710 coding upstream 282385 13322665 ~ 13357702 (-)
G3940 NA non-coding downstream 238039 12798811 ~ 12799231 (-)
G3935 NA non-coding downstream 252369 12783201 ~ 12784901 (-)
LOC120555888 NA non-coding downstream 270167 12763447 ~ 12767103 (-)
G3929 rps19bp1,LOC102787703 non-coding downstream 278181 12756475 ~ 12759089 (-)
G3926 NA non-coding downstream 285294 12751755 ~ 12751976 (-)
G3995 NA non-coding upstream 18566 13058846 ~ 13065061 (-)
G4032 NA non-coding upstream 48912 13089192 ~ 13157217 (-)
LOC120567932 NA non-coding upstream 97778 13138058 ~ 13151623 (-)
LOC120567935 NA non-coding upstream 111440 13151720 ~ 13152846 (-)
G4066 NA non-coding upstream 154766 13195046 ~ 13272174 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 8877 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 171231 12865968 ~ 12866039 (-)
trnac-gca_2 NA other downstream 174669 12862530 ~ 12862601 (-)
trnac-gca_1 NA other downstream 175505 12861694 ~ 12861765 (-)
trnac-gca NA other downstream 176915 12860284 ~ 12860355 (-)
G4168 NA other upstream 491473 13531753 ~ 13567266 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other upstream 978622 14018902 ~ 14042510 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 1671864 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 1860866 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 2386264 15426544 ~ 15685639 (-)

Expression


Co-expression Network