xpo1a (xpo1,LOC103359566)


Basic Information

Item Value
gene id xpo1a
gene name xpo1,LOC103359566
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7554032 ~ 7582024 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815533.1
CGGGCCGAAACACCGAGAATGAATATCCCGGTCTCAACCGGTTTCAACCGGTCCGTGGTTGGAAGCATGAGCTTAGAGGAAGAGCACACTTGCACGCATTAAAACATCTCTGCTCTCCAACAGTGTGTGCGAATAGAGCcagaaataaaaactatttttactTCGTGATTATGACCCGGAATACCGCTCAAAGTGTGATTCCGTGAATCTGTGTTGTTAGCTTAGTTAGCTTACTATTAGCCAGCAGACTTGAATCATCATTGACTTTTCCATTAGCACGCTAAGTTGCTATTAGCCTGCCTTGGGAGTCGGCTGTAATCACTGCTAGCCAAAGAAAGATATGTTTCAGACTGGCTGAAGACAAGAAAGAAATAAGCTGCGGAAAGCTTTTAATACATCGCCAAGAATCGATAAGTATCCAACGTAACGGCATTTTTAAATCAGCGCAGTTGGTGTCATCCAGGgaagctagctagcgttagcttgttGCTATCGAAGGTTAGCTAGGCGCAGGCTAGCTAAACGTGTGCCATGAGATAACGTTACACAGTGTTTCTTTGCTTTAAGAGGATTAATATTCCAGTCTTAAACCACAAGTCGCATTGGTTAACCATTACTTGTTTTCGGACGGGCGGACAAGACACCACTAGAAGCTCTATGCCAGCAGAAATGACGATGTTGGCCGATCACCCAGCCAGACAGCTGCTTGACTTCAGTCAGAAACTGGACATCAACCTGTTGGACAATGTTGTCAACTCCATGTACCACGACATTGGATCCCAGCAACGAGTGGCCCAGGAAGTCCTCACCAACCTGAAGGACCATCCAGACGCCTGGACGAGGGTCGACACCATCCTGGAGTTCTCTCAGAACATGAAAACTAAATATTATGCACTGCAGATTCTGGAGACAGTCATCAAAACACGCTGGAAGATTCTCCCCAGAAATCAGTGTGAAGGCATCAAGAAGTATGTTGTTGGGTTGATCATCAAGACGTCTTCTGATCCCACAAACATGGAGAAAGAGGGAGTCTACATATCAAAACTCAACATGATCCTtgtacagATCCTGAAGCAAGAATGGCCCAAACACTGGCCCACCTTCATCAGTGATATCGTGGGCGCGAGTCGGACCAGCGAGAGCCTCTGTCAGAACAACATGATCATCCTCAAACTGCTCAGCGAGGAGGTTTTTGACTTCTCCAGTGGCCAGATGACCCAGGTGAAGGCCAAGCACCTCAAAGACAGCATGTGCAACGAGTTCTCCCAAATATTCCAGCTGTGCCAGTTTGTGATGGAAAACTCCCAGAATGCCCCGCTGGTCCACGCCACGCTGGAGACTCTCCTCCGCTTCCTGAATTGGATTCCTTTAGGTTACATCTTCGAGACCAAGCTCATCAGCACTCTGGTCTACAAGTTCTTGAACGTGCCCATGTTTCGCAACGTGACGTTAAAATGTTTGACGGAGATCGGCGGAGTGAGCGTCAACCAGTACGAGGAGCAGTTTGTCAACCTTTTTACCCTCACCATGTGCCAGCtcaaacagATGCTTCCTTTGAACACTAACATCCGAGTGGCCTACGCCAACGGGAAGGACGACGAGCAGAACTTCATCCAGAACCTCAGCCTGTTCCTCTGCACCTTCCTCAAAGAACACGGCCAGCTCGTCGAGAAGAGATCCAACCTGCGAGAGACCCTCATGGAGGCCCTGCACTACATGCTGCTGGTGTCGGAGGTAGAGGAGACGGAGATCTTTAAGATCTGTCTGGAGTACTGGAACCACCTGGCAGCGGAGCTCTACAGGGAGAGTCCTTTCTCCACCTCCAGCACCCCGCTGCTTTCCGACGTCCCGCCACGCAGACACCTGTACCTGCCTGTACTCTCCCAGGTGCGTTTGCTGATGGTGAGCCGCATGGCCAAACCAGAGGAGGTGCTGGTGGTGGAGAACGACCAGGGCGAGGTGGTCAGGGAGTTCATGAAGGACACAGACGCCATTAACCTTTACAAGAATATGAGGGAGACTCTCGTGTATCTGACCCATCTGGACTACGCCGACACTGAACGCATCATGACGGAGAAGCTCCACAGCCAGGTGAATGGCACCGAGTGGTCGTGGAGGAACCTGaacatgctctgctgggccatcGGCTCCATCAGCGGGGCGATGCACGAAGAGGACGAGAAGAGGTTCCTGGTCACCGTCATCAAGGACCTGCTTGGCCTGTGTGAGCAGAAAAGAGGGAAGGACAACAAGGCCATCATAGCGTCTAACATCATGTACATCGTGGGCCAGTATCCTCGCTTCCTCCGAGCCCACTGGAAGTTCCTCAAGACTGTCGTCAACAAGCTGTTTGAGTTCATGCACGAGACCCACGATGGCGTGCAGGACATGGCGTGCGACACCTTCATCAAGATCGCCCAGAAGTGCCGGCGTCATTTTGTCCAGGTCCAGGTGGGCGAGGTGATGCCCTTCATCGACGAGATCCTCAACAATATCAACACCATCATCTGTGACCTGCAGCCACAGCAGGTCCATACGTTTTACGAGGCCGTTGGCTACATGATTGGAGCTCAGACGGACCAGGCGGTTCAGGAGCTTCTCATAGAGAAGTACATGCTGCTGCCTAACCAGGTGTGGGACAGCATCATCCAGCAGGCCACCAAGAACGTGGACATCCTGAAGGACGCGGAGACGGTGCGTCAGCTGGGCAGCATCCTAAAGACAAATGTCAGAGCCTGTAAAGCTGTCGGTCATCCCTTTGTTGTTCAGCTGGGACGAATCTATCTGGACATGCTCAACGTCTACAAGTGTCTGAGTGAAAACATCTCCTCGGCTGTCCAGACCAACGGTGAGATGGTGACCAAACAGCCTCTGATCAGGAGTATGAGGAcagtaaagagagagacattgaAGCTGATCTCTGGCTGGGTCAGCCGCTCCAACGACCCTCAGATGGTGGCAGAGAACTTTGTGCCCCCCCTGCTGGAGGCGGTGCTCATCGACTATCAGAGGAACGTACCGGCTGCTCGGGAGCCCGAGGTCCTCAGCACCATGGCAACCATCGTCAACAAGCTGGGAGTCCACATCACGGGAGAAATCCCCAAGATCTTTGATGCGGTCTTCGAGTGCACTTTGAACATGATCAACAAGGACTTTGAGGAATTCCCCGAACACAGAACCCATTTCTTCTACCTCCTTCAAGCCGCCACGTCCCAGTGCTTTCCAGCCTTCCTGTCAATCGCCCCGGCCCAGTTCAAACTCATCCTGGACTCCATCATCTGGGCCTTCAAGCACACGATGAGGAATGTCGCCGACACAGGTCTCCAGATCCTGTACACTCTCCTGCAGAACGTATCCGGAGAGGAGGCCGCAGCGCAGAGCTTCTACCAGACGTACTTCTGTGACATCCTACAACACATCTTCTCCGTGGTCACCGATACCTCGCACACTGCAGGGCTGACCATGCACGCCAccatcttggcctacatgtttAACCTGGTGGAAGAAGGGAAGGTCAGCGTTGCTCTTAGCGCCGCCAATCCGGCCAACAACCAGGCGCACGTCCAGGAGTACATCGCCAACCTGCTGAAGACGGCCTTCCCCCATCTGCAAGATGCCCAGGTGAAGGTGTTTGTAACGGGTCTGTTCAGTCTGAACCAGGACATCCCGGCCTTCAAGGAGCACCTGAGGGACTTCCTCGTGCAGATCAAGGAGTTTGCCGGCGAGGACACGACTGACTTGTTcctggaggagagggagacGTCTCTGCGCCAAGCCCAGGAGGAGAAACACAAGCTGCAGATGTCGGTGCCGGGCATCCTCAACCCGCACGAGCTGCCGGAGGAGATGTGCGACTGAAGGGCGAACAGCGGCGTACAAAACGGCTCTGAAGGAGGGAAAGGGTCAAGAGAGAGCAAGGACGCTTCCTGttgatacattttcttttcaagtgtgtttgtgtgcaagtgtgtgtgtgtgtgtgtgtttgaaaagaGAATGAGGGGCCAGAGGAAAGACCCCAGCACTAGGTTGTAAGTCGACCAAAATCAATGTCAATATGTAAATGAGAATCGCCCAGCCTGACCTCCCTCCACCCTGGCGcggattcttcttcttcttctttttcccccCTACGAACTTATTTTATacgatttattatttttttgtgtaacaTGCCATCTTTTGTTAATTCTTTTGCTAATTAAAAGCTTTGTCTGGCCATACGGTTCTTATACACATGCATGAAGTTGAAAGAATTCTTTTTAATCTCTCTGCACCCCCTCAGTTCACCTCTCCTCTCCTATTtgttaatatgtaaatatatatatatataatgttgaaAACACTTGCGATGGCTAGTTGACGGACTGCTCTGGTTTCTGAAGTGCCATGTGCATGGCGCCGGACGAATGTGATGCTCAAGGGGGTCGACATGTACTTCCTTTGTTGTCCTGCTATggtttgtcagtgtgtgtatcgtttgcttttttttttttttttaactctggcTCTGTGATGGAGCCGGACCTTCAGTTGGACCGCTCTGCGTTTGGATGAGAAGGAAGGCTGTGTGCATATCATCCTGTTTGTAAAGCTGTCTTAGTACTCTGAGAATATAAAGTTggctatttttacaaaaaaaaaaaa
>XM_039815544.1
CCACGATCTGTTTCCCAACGCATTTTAATTCAACAGTCGTTTAACGAGTCTATCAGTCGGGTTGTGGTGAATGCGGCTCTAAAAGCGCCAAGTTAGCCAGAAGCTCTATGCCAGCAGAAATGACGATGTTGGCCGATCACCCAGCCAGACAGCTGCTTGACTTCAGTCAGAAACTGGACATCAACCTGTTGGACAATGTTGTCAACTCCATGTACCACGACATTGGATCCCAGCAACGAGTGGCCCAGGAAGTCCTCACCAACCTGAAGGACCATCCAGACGCCTGGACGAGGGTCGACACCATCCTGGAGTTCTCTCAGAACATGAAAACTAAATATTATGCACTGCAGATTCTGGAGACAGTCATCAAAACACGCTGGAAGATTCTCCCCAGAAATCAGTGTGAAGGCATCAAGAAGTATGTTGTTGGGTTGATCATCAAGACGTCTTCTGATCCCACAAACATGGAGAAAGAGGGAGTCTACATATCAAAACTCAACATGATCCTtgtacagATCCTGAAGCAAGAATGGCCCAAACACTGGCCCACCTTCATCAGTGATATCGTGGGCGCGAGTCGGACCAGCGAGAGCCTCTGTCAGAACAACATGATCATCCTCAAACTGCTCAGCGAGGAGGTTTTTGACTTCTCCAGTGGCCAGATGACCCAGGTGAAGGCCAAGCACCTCAAAGACAGCATGTGCAACGAGTTCTCCCAAATATTCCAGCTGTGCCAGTTTGTGATGGAAAACTCCCAGAATGCCCCGCTGGTCCACGCCACGCTGGAGACTCTCCTCCGCTTCCTGAATTGGATTCCTTTAGGTTACATCTTCGAGACCAAGCTCATCAGCACTCTGGTCTACAAGTTCTTGAACGTGCCCATGTTTCGCAACGTGACGTTAAAATGTTTGACGGAGATCGGCGGAGTGAGCGTCAACCAGTACGAGGAGCAGTTTGTCAACCTTTTTACCCTCACCATGTGCCAGCtcaaacagATGCTTCCTTTGAACACTAACATCCGAGTGGCCTACGCCAACGGGAAGGACGACGAGCAGAACTTCATCCAGAACCTCAGCCTGTTCCTCTGCACCTTCCTCAAAGAACACGGCCAGCTCGTCGAGAAGAGATCCAACCTGCGAGAGACCCTCATGGAGGCCCTGCACTACATGCTGCTGGTGTCGGAGGTAGAGGAGACGGAGATCTTTAAGATCTGTCTGGAGTACTGGAACCACCTGGCAGCGGAGCTCTACAGGGAGAGTCCTTTCTCCACCTCCAGCACCCCGCTGCTTTCCGACGTCCCGCCACGCAGACACCTGTACCTGCCTGTACTCTCCCAGGTGCGTTTGCTGATGGTGAGCCGCATGGCCAAACCAGAGGAGGTGCTGGTGGTGGAGAACGACCAGGGCGAGGTGGTCAGGGAGTTCATGAAGGACACAGACGCCATTAACCTTTACAAGAATATGAGGGAGACTCTCGTGTATCTGACCCATCTGGACTACGCCGACACTGAACGCATCATGACGGAGAAGCTCCACAGCCAGGTGAATGGCACCGAGTGGTCGTGGAGGAACCTGaacatgctctgctgggccatcGGCTCCATCAGCGGGGCGATGCACGAAGAGGACGAGAAGAGGTTCCTGGTCACCGTCATCAAGGACCTGCTTGGCCTGTGTGAGCAGAAAAGAGGGAAGGACAACAAGGCCATCATAGCGTCTAACATCATGTACATCGTGGGCCAGTATCCTCGCTTCCTCCGAGCCCACTGGAAGTTCCTCAAGACTGTCGTCAACAAGCTGTTTGAGTTCATGCACGAGACCCACGATGGCGTGCAGGACATGGCGTGCGACACCTTCATCAAGATCGCCCAGAAGTGCCGGCGTCATTTTGTCCAGGTCCAGGTGGGCGAGGTGATGCCCTTCATCGACGAGATCCTCAACAATATCAACACCATCATCTGTGACCTGCAGCCACAGCAGGTCCATACGTTTTACGAGGCCGTTGGCTACATGATTGGAGCTCAGACGGACCAGGCGGTTCAGGAGCTTCTCATAGAGAAGTACATGCTGCTGCCTAACCAGGTGTGGGACAGCATCATCCAGCAGGCCACCAAGAACGTGGACATCCTGAAGGACGCGGAGACGGTGCGTCAGCTGGGCAGCATCCTAAAGACAAATGTCAGAGCCTGTAAAGCTGTCGGTCATCCCTTTGTTGTTCAGCTGGGACGAATCTATCTGGACATGCTCAACGTCTACAAGTGTCTGAGTGAAAACATCTCCTCGGCTGTCCAGACCAACGGTGAGATGGTGACCAAACAGCCTCTGATCAGGAGTATGAGGAcagtaaagagagagacattgaAGCTGATCTCTGGCTGGGTCAGCCGCTCCAACGACCCTCAGATGGTGGCAGAGAACTTTGTGCCCCCCCTGCTGGAGGCGGTGCTCATCGACTATCAGAGGAACGTACCGGCTGCTCGGGAGCCCGAGGTCCTCAGCACCATGGCAACCATCGTCAACAAGCTGGGAGTCCACATCACGGGAGAAATCCCCAAGATCTTTGATGCGGTCTTCGAGTGCACTTTGAACATGATCAACAAGGACTTTGAGGAATTCCCCGAACACAGAACCCATTTCTTCTACCTCCTTCAAGCCGCCACGTCCCAGTGCTTTCCAGCCTTCCTGTCAATCGCCCCGGCCCAGTTCAAACTCATCCTGGACTCCATCATCTGGGCCTTCAAGCACACGATGAGGAATGTCGCCGACACAGGTCTCCAGATCCTGTACACTCTCCTGCAGAACGTATCCGGAGAGGAGGCCGCAGCGCAGAGCTTCTACCAGACGTACTTCTGTGACATCCTACAACACATCTTCTCCGTGGTCACCGATACCTCGCACACTGCAGGGCTGACCATGCACGCCAccatcttggcctacatgtttAACCTGGTGGAAGAAGGGAAGGTCAGCGTTGCTCTTAGCGCCGCCAATCCGGCCAACAACCAGGCGCACGTCCAGGAGTACATCGCCAACCTGCTGAAGACGGCCTTCCCCCATCTGCAAGATGCCCAGGTGAAGGTGTTTGTAACGGGTCTGTTCAGTCTGAACCAGGACATCCCGGCCTTCAAGGAGCACCTGAGGGACTTCCTCGTGCAGATCAAGGAGTTTGCCGGCGAGGACACGACTGACTTGTTcctggaggagagggagacGTCTCTGCGCCAAGCCCAGGAGGAGAAACACAAGCTGCAGATGTCGGTGCCGGGCATCCTCAACCCGCACGAGCTGCCGGAGGAGATGTGCGACTGAAGGGCGAACAGCGGCGTACAAAACGGCTCTGAAGGAGGGAAAGGGTCAAGAGAGAGCAAGGACGCTTCCTGttgatacattttcttttcaagtgtgtttgtgtgcaagtgtgtgtgtgtgtgtgtgtttgaaaagaGAATGAGGGGCCAGAGGAAAGACCCCAGCACTAGGTTGTAAGTCGACCAAAATCAATGTCAATATGTAAATGAGAATCGCCCAGCCTGACCTCCCTCCACCCTGGCGcggattcttcttcttcttctttttcccccCTACGAACTTATTTTATacgatttattatttttttgtgtaacaTGCCATCTTTTGTTAATTCTTTTGCTAATTAAAAGCTTTGTCTGGCCATACGGTTCTTATACACATGCATGAAGTTGAAAGAATTCTTTTTAATCTCTCTGCACCCCCTCAGTTCACCTCTCCTCTCCTATTtgttaatatgtaaatatatatatatataatgttgaaAACACTTGCGATGGCTAGTTGACGGACTGCTCTGGTTTCTGAAGTGCCATGTGCATGGCGCCGGACGAATGTGATGCTCAAGGGGGTCGACATGTACTTCCTTTGTTGTCCTGCTATggtttgtcagtgtgtgtatcgtttgcttttttttttttttttaactctggcTCTGTGATGGAGCCGGACCTTCAGTTGGACCGCTCTGCGTTTGGATGAGAAGGAAGGCTGTGTGCATATCATCCTGTTTGTAAAGCTGTCTTAGTACTCTGAGAATATAAAGTTggctatttttacaaaaaaaaaaaa

Function

symbol description
xpo1 Enables nuclear export signal receptor activity. Involved in nuclear export and regulation of proteasomal ubiquitin-dependent protein catabolic process. Located in several cellular components, including annulate lamellae; kinetochore; and nucleus. Part of ribonucleoprotein complex.

NR:

description
PREDICTED: exportin-1-like

GO: NA

KEGG:

id description
K14290 XPO1, CRM1; exportin-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815533.1 True 4647 mRNA 0.51 25 7554032 7582024
XM_039815544.1 False 4097 mRNA 0.52 25 7554032 7581212

Neighbor

gene id symbol gene type direction distance location
usp34 NA coding downstream 2417 7441070 ~ 7551615 (-)
LOC120565143 NA coding downstream 246156 7292547 ~ 7307876 (-)
LOC120562943 NA coding downstream 298687 7249581 ~ 7255345 (-)
LOC120565981 NA coding downstream 307619 7241820 ~ 7246413 (-)
b3gnt2a NA coding downstream 330170 7158870 ~ 7223862 (-)
fam161a NA coding upstream 3371 7585395 ~ 7601539 (-)
cct4 cct4,LOC102790717 coding upstream 20009 7602033 ~ 7613702 (-)
LOC120561073 NA coding upstream 308683 7890707 ~ 7895739 (-)
ltv1 ltv1,LOC107100359 coding upstream 333174 7915198 ~ 7931404 (-)
taf5l taf5l coding upstream 387326 7969350 ~ 7979457 (-)
LOC120568185 NA non-coding downstream 112965 7433916 ~ 7441067 (-)
G2451 NA non-coding downstream 115760 7436474 ~ 7438272 (-)
LOC120568064 NA non-coding downstream 277489 7271819 ~ 7276543 (-)
LOC120564702 NA non-coding downstream 285643 7263691 ~ 7268389 (-)
G2392 NA non-coding downstream 386205 7166432 ~ 7167827 (-)
G2743 NA non-coding upstream 50350 7632374 ~ 7633344 (-)
G2732 NA non-coding upstream 60098 7642122 ~ 7662768 (-)
G2750 NA non-coding upstream 139913 7721937 ~ 7722318 (-)
G2759 NA non-coding upstream 231769 7813793 ~ 7860439 (-)
G2766 NA non-coding upstream 381242 7963266 ~ 7965265 (-)
LOC120569296 NA other downstream 181474 7331956 ~ 7372558 (-)
commd1 commd1,LOC102781613,LOC103150757 other downstream 313882 7225340 ~ 7240150 (-)
trnae-uuc_1 NA other downstream 530844 7023117 ~ 7023188 (-)
trnae-uuc NA other downstream 532387 7021574 ~ 7021645 (-)
LOC120571633 otx1,LOC102233826 other downstream 536373 6999171 ~ 7017659 (-)
akt3b akt3,LOC103470003,LOC103150748,LOC100692017,LOC108246299,LOC101174244 other upstream 66818 7648842 ~ 7690587 (-)
G2752 NA other upstream 157800 7739824 ~ 7763948 (-)
capn9 capn9 other upstream 353916 7935940 ~ 7957621 (-)
G2840 NA other upstream 625228 8207252 ~ 8209535 (-)
wipf2a NA other upstream 853775 8435799 ~ 8501162 (-)

Expression


Co-expression Network