G2732


Basic Information

Item Value
gene id G2732
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7642122 ~ 7662768 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3804
tgaaaaaagtaaaaaaaaaaaaaatatccccaaaaaaataatgtttcttTCTCATACATTTGCCATGGCAACGCACATTCCCCCAATCCCATGGCGATGGAAACCACTGTCTACCGGTTCAACACACAAAAGAGGGACGAGAACGGACGAGTCTGTATGATTCCTTTTCATCGTTGCAGTGttactactttttacttttctcCACCCAttgtgttctctttttttttctctctctctctctctcgcgttTCTACTTCTTTAGTtagttctttttcttttgaaaacaggaagaagaagaagaagaaaaaaaaaaaaaacactaaactgCCAGAAACTGCACAGTTCACTCAGGCGCCACAGAGCACAACCGCGTTCAAACTCAGCTAACCGCTCCAGCTTTCCACAGCCGGCAGGGGAATGAGGCCTTTTCTCTGCTTTCTCAccgcttctcctcctcctccttctcctcctcctccttctcctcctcctcctcctccttctcctcctcctcctccgtttCTTCACCTCTGCTTTATGTTTCCTCATCGTAGCTGTAGGACTAGTGGAATGGGTGTTTACACAGGGAAATGTGGcttaatgtatgtatgtatgtatgtgggaCATGGGGGTCAACTTTATGctgtcatcacacacacacacacacacacaaacaaacacacacacatacagtatatatatttagaCTCAGAAACAGGAAACAGCTGTGAGATCAGACTGAAGTCGGCAGTTCACTCCACACTAAAAATGAAACTTGGCGTTTTtgtaaaatgagcagaatatatCCGAACACTCGCTGCatctacaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgttcgtgtgttctCAACAGCTCCTGTCAGGTGAAGCTGGACTCTCTGCTGCGAGTCGAAGCCAGTCCACTCAGAGAGGCAGTTCAGTTGTCCGTCTGCAAATTTGTATATCCTCAGGTAAAGGATACACGCTACAAGCCCGGTGAAATATGAACCTGACCTGAAAGGCAGTCGAGTCCTGCTATGAGCATTTACCGTTAAAGTTTCAGCGTGGCGGAAGACGTAAATGAAAAACAGTTAACCCTCCATTTTTCCGTGGCGCGTTTGCAGCTGTCCTTCCTCGAACTAAAAAAACTCTTCTTCGTCCGTCGAACAGACCGACAGTTCACGCGATATTTCAGGACACAAAAGAGTTTTCCTTTTAGCTTTCAGCTGCTACTCGGTGAGACGGTCTGGGTCCCACGCTCTTGATACGAACTAACTACGTAAGAGATCGGTGAGGGTTATCTTGGCAGTTCAAATCGGAAACGAATGTAGGGAGGAGGGCGTTTTCAAATGCAGTTTGCACGGCTAAAGTCTGTTCAGTTTACGTGATATTTCTGGACATACAGAGAGTTTGTTCGGGCGTTCTTCCTTGTAGCTTTCAGCTGCTACTCGGTGAGACGGTCTGGGTCCCACGCTCTTGATACCAACTAAGAATCTAAAGAGATTGGTGAGGGTTGTCTTCTGCATTTCAAATCGCAAACGAATGAAGGGAGATGGGCGTTTTCAAAATGCAGTTTGAACGGTTCAAATCTGTTCGGCCACTGGGGGGGATATCAACGTCCAAAGTCAAGGACATAGGCGTAGGTTTGAAGgagtttaaaggtgcactatgacttcctgcatggtttcattTTGGTCTCAAATCGTAGTCATCTCTCCGTTGACCccctagctgcctgcccccctgAATACACCGTGTCTCGGGAGACAACCCAGGGCTCGTAAACGTCAAATAAACActtaggggcacaggctgtgcaccaaaacacaaccaaccactccagccaatcaccgacgaGATGGTtggttagtcatgacagttacagAAACAttgggggaggggcgagcttgctctgtttacgTCAACGGAAGTGACGTCGTGCAGGAACTCGTAGTGCGCCTTTAACGTAACATGACCCAGAGAAACATAAACGCTGAGAACGTTAAAACCCTTTTGGAAAGCTTCCGTTAATGTGACATTAAGAGGATATTAGGCTGAGGAACAAAGGACCCTGGGAACACAGACACGCTCCCGTCTAAATGTTATCACGCTAACTCGCTAACTATTCGCTTTCTTGTCCGTGTGATAGCGAGTTCGATACCTCTCTCACGTCCGCGTGTAAAGCagattctttgtaaatcttttacAATCCTTCCCCAGGAAGAACCGAGCAGGCCTGCCTAGTCGCGCCCTCCAAATCTTctccaaaacttgacattttcagcgtgtagcctgctagctcgaagtttgctGTTGTTTCCCGAAGTGGAGTTtaagaacagcaacacacacacacagagagagagagagagcgtaaGGTGAGTAGGGcagctccctcttagtcgattagtcgactaatcggtcgttttggtcttcgtcaacttagatctctttagtccattagtcatgtctgatgttgttttcacgctgaatgacttatttccaagaaacgtacgagcacatctctggtaaacacaagaattaaagtggtgcttttagcaggactctttgtggagaaactcagatttacagatctgtcgattaaatcaactaatcgattagtcgatgcAGTTGAACGAGCGTTAGTCGACTGAGAATTTCTTccatcgagcacagccctacaggTGAGGGAAAACGCGCGCCGCACCTCAGGCAATTATCCCGAAAATGTCCTTCCGTTAATCCACTACACTAAACACGACAAAGACAGACCAGATAGATGTTGGTTTGTTCCTGGTATCGGAGATCCGACCCAGGACCACCGGCGCAAATTTGcgtttcctaggatggcgaagCCTCccgattggcttaccctggtatCCTAACCCTCACCAATCTCACTCCTCGTGCCCAAACCTAACCAAGGCAACGAGTATTAGCCAATCACAGGCAGAGTAGGGCTGGACCTGCCTTCGCCGTCAGAGGAAAACGCAAATTTGCGGACCCGAGTGGGGCCGGATCCAGAGTATGTTTAGTCTAATCGGCTCAGTTAGGGTCCCGTTGCAGATGAAAATAACTGAATACCTACATGTACAACTACAACCAATGTTAGTCTACAAATATGTCCACATAGTATAcggctatgttcacacttggcgtctttttttGAAGCTGCTAGCGTTTGTTTACGTTATAATCCTGTGGAGTAAACAAAAAGGTCCTGAGCGCTTTTTTAAACGCCAGCGgcgacttcttttttttttgcagctcaGAGCGTCTTTTTGAAGGTGAAAAAAGTTCTGCTTTTCTGAAAAAATAAACGCCCTGCGTCAAGTGCTTTTTTTTGACAGCCGACCAATGAAAGgcggagtagccagacctgtcGTTTCCATAACAACGAGAAAACATGGAGTCGGAGCACAGCGAGCTATACGGTATGACCGGGTGCTCCCTGTTCAGGGAActcgctttgttttatctaacgttagcatctctctctctctctctctctctatctatctctctctctctctctctctctctgttctttctctagctcgctccaccactttgtttatctaacgttagcattgctctctctctgttctttctctagttcgctccaccactttgtttatctaacgttagtatctctctctctctctgttctttctctagctcgctccaccactttgtttatctaacgttagcatctctctctctctgttctttctctagctcgctccaccactttgtttatctaacgttagcatcgctctctctctctgttctttctctagctcgctccaccactttgtttatctaacgttagcatctctctctctctctgttctttctctagttCGCtacaccactttgttttatctaacgttagcaccgctctctctctctgttctttctctagctcgctccaccactttgtttatctaacgttagcatctctctctctctctgttctttctctagttcgctccaccactttgtttatctaacgttagcatctctctctctctctctctgttctttctctagctcgctccaccactttgtttatctaatgttagcatcgctctctctctctgttctttctctagctcgctccaccgctttgtttatctaacgttagcaccgctcCACATAGCGCTCTAGCTAGGATACGGTAGCAATAGCTGTTGTCATAGCAACAAAACAAGCTCTCGGCTGCTTTTCGGAATAAAAACGCTgccagcttctttttttttctctcgctacaaaagcgccctagtcaactttttcttgtcaaaaaaaagACGCCAAGCGTGAACACAGCCTtagtctggccagtccacacagccttcctggatgggagaacaatgtgctctggtttattggcatttctttaaaccaaccacATTCGTctcgggcggcgctaagcgcagGTCAGAGCCGCTGCCAAGGAACTGGTTCTGgcggaacatgtggacgttcaaaagtagtttttagtcgtgcaacagaaacctGAAACGTAGTCGATACGGACTAAACCTGCGCTAGTTTAGAACGGTGTCCACGTCGTATTAACGCAGTGAGTCCCGCCCCCCTAGTGGTCGGAGAGAGAACCTTTTGATTCACATTTAACTGACTCGTAAGGTACTGAATCCAAAAAAACGACACTATGAACTCTCCGCGTTGTTCGGGAACTAAACGCGAAGCCTCTTTGTCGGTTGCGTATCGACCGTTTCACCgcctataaaaaagaaaaaaaacacgtcTGATTGAACGTTTTCTGGAGAACACACCGCCCACTTCGTCTGCTCTGCTGCTCTCAAGTCACTCGTCAGGGTTCCTGCACACATCTGGGGAGGATTTGGGGAGGATTTCCAGGTCCTAATTGCAAAAGGTGTTTTGGgaaaaaatcattgtttttgtgatgaaGTATGTCATCCCCCATACTCTTTAAGACTCACATgtacaagagaggagagaaatgtGACTGTGAAACATATCGAACAGTGAGTGACAACGTGTTTTGTTGAGGacatttttgtgtttctttttaccGTGACTGTGAAGGAACCctgacaagcacacacacacacacacacacacacacacacacacacattcatattcaCACGCAGATACACAAAAGACTGTTTTTTAGACGATAGATCAGAGTGAAGAAGATTTAATTTATCACACGGACACTAACGGAAACGAGGCTTCCAGATGCAGGGGTTCTGTCCTGTCAGTATTATGagatattacatttatttacacacacacacacacacacacacacgttttaatCCTGAACAGAGggtatcaatatcaataaatcaCTAATCATGTCACAGATCACGAGAAAACTGAGCCGTGAGACACTCATGTATGAAGACTGTGAGGactgccagaaaaaaaaaaaaaaaaagttgagtcGCCCCAAAACTTGTTGATGTAAATATGcaatgcctttttattttttattttttttggggaggggAGGGTCTTTTGTGGCATCCTGACAGACAacacaaacctttttttttctgtgcgaCTGTACTTTGCGAGCTTGCCGATGtgaaaatacaacaacaacaacaaacgaTTCAAAAACTGcatttaagaaaaacattttaaaaaaaataaaaaggagggagaaaaaaaatgaaataaagacaGCGTCAAAGACTGGACCCTTCCGTTGAGCTTCTCGGGGTCGATACACAGACTCGGCTTTCTATCGTCCACGGAGGATGTTTCCATGGAGACaacacccccccctcccccctctcccccctgcCTTCCTTCGGTCGCCATGGTCCCCGAAAACGATCATCGACTCCTGATTTTCTGTGAGAGGACACGACTGTACCTGTGGAGTCTGCACTGTCATTACTGGTTTCTCTTCACCCTcttttaaaatggaaaaaaatatatatatatatatatatatatatatacaaaaagtgGGACCATGGAGgactttttatttcaattttttctttctctttttatttttgcagtGCTGGTTTCATCAGGTTGTTCCACCAATCCCATCATCCCTTgctcctcctctttttttgttttttttgtaccatagtatgttttatttatctttGTCATCCTAGGCAGTGTTACCTTGTATgtcgtttgaaaaaaaaaaag

Function

GO:

id name namespace
GO:0006376 mRNA splice site selection biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0006397 mRNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0000245 spliceosomal complex assembly biological_process
GO:0008380 RNA splicing biological_process
GO:0019904 protein domain specific binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3804 True 6251 lncRNA 0.45 4 7642122 7662768

Neighbor

gene id symbol gene type direction distance location
cct4 cct4,LOC102790717 coding downstream 28420 7602033 ~ 7613702 (-)
fam161a NA coding downstream 40583 7585395 ~ 7601539 (-)
xpo1a xpo1,LOC103359566 coding downstream 60098 7554032 ~ 7582024 (-)
LOC120561073 NA coding upstream 227939 7890707 ~ 7895739 (-)
ltv1 ltv1,LOC107100359 coding upstream 252430 7915198 ~ 7931404 (-)
taf5l taf5l coding upstream 306582 7969350 ~ 7979457 (-)
cdc6 cdc6,LOC102777898,LOC104942167 coding upstream 416454 8079222 ~ 8095263 (-)
LOC120558849 NA coding upstream 502192 8164960 ~ 8293126 (-)
G2743 NA non-coding downstream 8778 7632374 ~ 7633344 (-)
LOC120568185 NA non-coding downstream 201055 7433916 ~ 7441067 (-)
G2451 NA non-coding downstream 203850 7436474 ~ 7438272 (-)
LOC120568064 NA non-coding downstream 365579 7271819 ~ 7276543 (-)
LOC120564702 NA non-coding downstream 373733 7263691 ~ 7268389 (-)
G2750 NA non-coding upstream 59169 7721937 ~ 7722318 (-)
G2759 NA non-coding upstream 151025 7813793 ~ 7860439 (-)
G2766 NA non-coding upstream 300498 7963266 ~ 7965265 (-)
G2767 NA non-coding upstream 303104 7965872 ~ 7968429 (-)
G2799 NA non-coding upstream 381764 8044532 ~ 8049470 (-)
LOC120569296 NA other downstream 269564 7331956 ~ 7372558 (-)
commd1 commd1,LOC102781613,LOC103150757 other downstream 401972 7225340 ~ 7240150 (-)
trnae-uuc_1 NA other downstream 618934 7023117 ~ 7023188 (-)
trnae-uuc NA other downstream 620477 7021574 ~ 7021645 (-)
LOC120571633 otx1,LOC102233826 other downstream 624463 6999171 ~ 7017659 (-)
G2752 NA other upstream 77056 7739824 ~ 7763948 (-)
capn9 capn9 other upstream 273172 7935940 ~ 7957621 (-)
G2840 NA other upstream 544484 8207252 ~ 8209535 (-)
wipf2a NA other upstream 773031 8435799 ~ 8501162 (-)
G2938 LOC107098689,LOC103359055 other upstream 1095881 8758649 ~ 8767973 (-)

Expression


Co-expression Network