G2799


Basic Information

Item Value
gene id G2799
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8044532 ~ 8049470 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3888
ctttattaaataaaaaaaggtgtcTAGAAAacctaaagaaaaaaacatccaaagtgTTCAGAATGAGAAATAACAGACAGCAGTTtgtaagtgaaaataaatggactttatttgtcttattgtcttgtttttctttttttggtcttTCCTAacattttctcctttttcctcAGTTGGTCCGAGCTGGAGCGTGTCGTACCTCAAAGCTTTCACAATCAACATATTAAAAACATTGCATGACATAACAAAaggaataaataaacatatgtacagTTTAAGCCGCCACACGATTGATGTAGAAGATCTCGTTGTTTTCGTGTTATTCGTGTTATTGGGCGGCGGCCGCGTGTTTAGAAGCACTTGCGGTGGACGATGCTGGGACCGGCCTCGTCGTACTCCTGCTTGCTGATCCACATCTGCTGGAAGGTGGAGAGGGAGGCCAGGATGGAGGAGGGCTGGAACAGGGTCTCGGGGCAGCGGAAACGCTCGTTGCCAATGGTGATGACCTGACCGTCGGGCAGCTCGTAGCTCTTCtccagggaggaggaggaggcggccGTGGCCATCTCGTTCTCAAAGTCCAGAGCCACGTAGCAGAGCTTCTCCTTGATGTCGCGCACGATCTCACGCTCAGCTGAAAACGGAGAGCAAAGATCAGACTTCTGTGCCCCAAACAAACCacaccacaataaaaagaaacaaaatcagAAACTACTCAAAAAAGATCCAAGTAGGAGTGTTTTAGATGTTTCGAAGACGGGGTATTGATATCAAGACatcaaactagggctgcaactaacaagtATTTCAATTTTTGATTAATCGGTTGATCATTTTCTCGATttgtggattagttgtttggtttataaaatgtcagaaaatggtgaaaaatgtggatcagtgtttcccaaaaagccccaagatgacgtcctcaaatgtcttgttatgTCCACAAatcaaagatcttcagtttactgtcccagaggagagaaggaactagaacaatattcacatttaacaagctgacatctgagaagtttgacttttttctcatagaaaatgacagttgaaaattaatgtaaccctcctgttgtcctcgggtcaaatttgacccattttcaaaaaagtttctatatcagaaatttggctttcttttaacaaaattgtcaaaaaaagatAACGTGGATGTGTGGATGGTTctatacaacgctcttcacaagtaaaaaacatgatcagttcactacttgcATTGAATCTGGGTGCTTTataaaaaaagcttttataaagtagatcagaggtgtcaaactcaatttcccagagggccacactggaaactaaGAGTGACATCAAGGGCcggacatgtttagtttattcacaaaGTCAAGGATCTTTTACTGGATTATTgcgtgtctcatatagtcttctcacttgcagtttggtccacataaagcccccaaaaagtaacttagccatcaaaagaaaaaagcgactggaaaaaaaaagcgactggaaaaaaaaaaacgccagaaaaggccccaaaaacatcggaaaaagtggcaaaataaTCGGAAAAAAGGCACCAAAAGCTTCtgcaaaagagacaaaaacttcagaaaaagctacaaaaactaggcgggccggatcaaaatctgcaaggggccagatttggcccgcgggcctcgagtttgacacgtgtgaagtagatgaaaaacaacaaaaagcgctgaaaaaaaaatctacaaaaacatcagaaaaagtgacaaaaacgtggaaggaaaaaataacaaaaatgtctgaaaaaacgacaaaaaaagtgtcaaaaaatacGACTAAAACGTTTTAATTTTGACctagaaaaacaaaatgttgcatAGTTGAGGGAAACAAGGGTTAATAGTGGACAACTAACCAATTATTTGATTGATCTTTGCAACTCTACATCAAAACTGAATACATTTCCATTTCTGAGCCTTTTTTCGGgacacgtacagtacaggccaaaagttt

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU3888 True 2007 lncRNA 0.43 2 8044532 8049470

Neighbor

gene id symbol gene type direction distance location
taf5l taf5l coding downstream 65075 7969350 ~ 7979457 (-)
ltv1 ltv1,LOC107100359 coding downstream 113128 7915198 ~ 7931404 (-)
LOC120561073 NA coding downstream 148793 7890707 ~ 7895739 (-)
cct4 cct4,LOC102790717 coding downstream 430830 7602033 ~ 7613702 (-)
fam161a NA coding downstream 442993 7585395 ~ 7601539 (-)
cdc6 cdc6,LOC102777898,LOC104942167 coding upstream 29752 8079222 ~ 8095263 (-)
LOC120558849 NA coding upstream 115490 8164960 ~ 8293126 (-)
LOC120558897 NA coding upstream 249111 8298581 ~ 8332326 (-)
LOC120558865 NA coding upstream 255238 8304708 ~ 8316194 (-)
LOC120558883 NA coding upstream 309091 8358561 ~ 8363673 (-)
G2767 NA non-coding downstream 76103 7965872 ~ 7968429 (-)
G2766 NA non-coding downstream 79267 7963266 ~ 7965265 (-)
G2759 NA non-coding downstream 184093 7813793 ~ 7860439 (-)
G2750 NA non-coding downstream 322214 7721937 ~ 7722318 (-)
G2732 NA non-coding downstream 381764 7642122 ~ 7662768 (-)
G2809 NA non-coding upstream 54603 8104073 ~ 8240664 (-)
G2828 NA non-coding upstream 85208 8134678 ~ 8137391 (-)
G2829 NA non-coding upstream 89374 8138844 ~ 8143373 (-)
G2842 NA non-coding upstream 163447 8212917 ~ 8225961 (-)
G2808 NA non-coding upstream 168581 8218051 ~ 8297164 (-)
capn9 capn9 other downstream 86911 7935940 ~ 7957621 (-)
G2752 NA other downstream 280584 7739824 ~ 7763948 (-)
akt3b akt3,LOC103470003,LOC103150748,LOC100692017,LOC108246299,LOC101174244 other downstream 353945 7648842 ~ 7690587 (-)
LOC120569296 NA other downstream 671974 7331956 ~ 7372558 (-)
commd1 commd1,LOC102781613,LOC103150757 other downstream 804382 7225340 ~ 7240150 (-)
G2840 NA other upstream 157782 8207252 ~ 8209535 (-)
wipf2a NA other upstream 386329 8435799 ~ 8501162 (-)
G2938 LOC107098689,LOC103359055 other upstream 709179 8758649 ~ 8767973 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other upstream 856202 8905672 ~ 8908086 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 1459134 9508604 ~ 9640514 (-)

Expression


Co-expression Network