G2809


Basic Information

Item Value
gene id G2809
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8104073 ~ 8240664 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3899
TCGCTCGggagaccgctgtgtccaacgttactagaaggtagagcgagctacagctgacagggagagagagaatctATCACTACAGCCagtcttgtctttgtgtctttgctagtttaagaccgacgcacttgtcaatttcccgtccagcgcccgcgactaggattagtgtgtttgacccTACCTTGCATCCTCCCTTTTTTTCCAGCCATGACAATCCGGTGTGAGTAGAGGAGTGGAGCTTGTCATAACCAACATGGTAGCCTATACAAAACAAAGTGGTGAAATGGCTCCAAcatcatttgttgcgtctaaatatcAATGAGGATAAAtcaaattgttattgttgttcttattatttaggggggcttaggaacattttggggtagcttcagcacccctaaaataggcctaacgacgTCCCTGCTACTGATAATCATCAACATCAGCAGCAGTTCTACTGAttctctgtctttgttttaaatctattaataagaaaagaaacataTTCTCAGCTGTCCAGATGTGGAGTTTATCAGAGAAACGAGCCATCAGGACTAACAGGACCCTCTTTAAAGGAGTCATCAGAGCAGAAAGTCACAGTCCTAAAAACTAAACCAGACTCCTAGagtctctcctctgtctgttcTTAGTGTCAGAAAACTATTTGTGATATAAAATGTTGTGATATATCTTTATATTTCACATGATGTTCATGTTACTACAGGTTTGAGTTTAAATTGACGTGTTACATAATGTTCTGTCTTCTTCTAGTTGTGTAATTACTACATCAATATATCATGTCATATGTTACTTGTAATGATCTTTCTATTGTTACCTGTCTAGGGACTACTGATGTAAATTAGCATTGATGCTAACTCCAGCATGTTAACATCTTGACGTTCATTAACGAGCTCTGTCCATGTTCAGTTACTGTGaatttaaataaagttattacaGCAGAAA
>TU3901
CGTGAATGGCGAACTTTTAAGCtcctgtttttgtttactcTACTGCTGGTTTATCAGGCGAACCCGTCTTCACGGTGTCCCACCATACTTCTATACGGGATAAAGGAGAGCATCGTCTCACCTGTCCTCAGACCATAGAGGCAGCAGAAGGAGATGATGTCATTATACGGTGTGGTCTGGACCCCCCCGTCGACTTGTCTGACTCCACGCTGGATGTGGCGAGACTCGACCTCGGTGACGATGATGGTGATGTCCACTGCTATCGAAGAGGAAAGGACCAACAGGATGACCAGATGGATCGATACAGAGACAGAACAACTCTCAACCATGAAGACCTGATCAGAGGCATCGTGACTCTGAAGATCTCCTCAGTAACTCTGTCTGATAGTGGTCCATACAAAGTCTACGTCCCAGACCTGACAGCCAGTTTTATCGTTAACATCACTGTTGTACCCAAAGGCCAAGTGAGCGAGACGAAGAGAAATGATCCAACCACAACTAGACCTCCGGCTACCAGTCCTGGTAAATGTCTGATCAGTTGTCTAGAAGTCTGTACACAATAGTTTTAAATTCATGCATAACGTTTACATCAGAACTATAAATTTCAACGCTGCGCTAGAGCAGCACGGTACATCGTTGTAGCATCAACATCACGATGTGCACACAGGACGTCCTGCTCCAGTGGTTCTGGT
>TU3903
TCGCTCGggagaccgctgtgtccaacgttactagaaggtagagcgagctacagctgacagggagagagagaatctATCACTACAGCCagtcttgtctttgtgtctttgctagtttaagaccgacgcacttgtcaatttcccgtccagcgcccgcgactaggattagtgtgtttgacccTACCTTGCATCCTCCCTTTTTTTCCAGCCATGACAATCCGGTGTGAGTAGAGGAGTGGAGCTTGTCATAACCAACATGGTAGCCTATACAAAACAAAGTGGTGAAATGGCTCCAAcatcatttgttgcgtctaaatatcAATGAGGATAAAtcaaattgttattgttgttcttattatttaggggggcttaggaacattttggggtagcttcagcacccctaaaataggcctaacgacgTCCCTGCTACTGATAATCATCAACATCAGCAGCAGTTCTACTGAttctctgtctttgttttaaatctattaataagaaaagaaacataTTCTCAGCTGTCCAGATGTGGAGTTTATCAGAGAAACGAGCCATCAGGACTAACAGGACCCTCTTTAAAGGAGTCATCAGAGCAGAAAGTCACAGTCCTAAAAACTAAACCAGACTCCTAGagtctctcctctgtctgttcTTAGTGTCAGAAAACTATTTGTGATATAAAATGTTGTGATATATCTTTATATTTCACATGATGTTCATGTTACTACAGGTTTGAGTTTAAattgacatgttacataatgTTCTGTCTTCTTCTAGTTGTGTAATTACTACATCAATATATCATGTCATATGTTACTTGTAATGATCTATTGTTACCTGTCTAGGGACTACTGATGTAAATTAGCATTGATGCTAACTCCAGCATGTTAACATCTTGACGTTCATTAACGAGCTCTGTCCATGTTCAGTTACTGTGaatttaaataaagttattacaGCAGAAA
>TU3905
TCGCTCGggagaccgctgtgtccaacgttactagaaggtagagcgagctacagctgacagggagagagagaatctATCACTACAGCCagtcttgtctttgtgtctttgctagtttaagaccgacgcacttgtcaatttcccgtccagcgcccgcgactaggattagtgtgtttgacccTACCTTGCATCCTCCCTTTTTTTCCAGCCATGACAATCCGGTGTGAGTAGAGGAGTGGAGCTTGTCATAACCAACATGGTAGCCTATACAAAACAAAGTGGTGAAATGGCTCCAAcatcatttgttgcgtctaaatatcAATGAGGATAAAtcaaattgttattgttgttcttattatttaggggggcttaggaacattttggggtagcttcagcacccctaaaataggcctaacgacgTCCCTGCTACTGATAATCATCAACATCAGCAGCAGTTCTACTGAttctctgtctttgttttaaatctattaataagaaaagaaacataTTCTCAGCTGTCCAGATGTGGAGTTTATCAGAGAAACGAGCCATCAGGACTAACAGGACCCTCTTTAAAGGAGTCATCAGAGCAGAAAGTCACAGTCCTAAAAACTAAACCAGACTCCTAGagtctctcctctgtctgttcTTAGTGTCAGAAAACTATTTGTGATATAAAATGTTGTGATATATCTTTATATTTCACATGATGTTCATGTTACTACAGGTTTGAGTTTAAattgacatgttacataatgTTCTGTCTTCTTCTAGTTGTGTAATTACTACATCAATATATCATGTCATATGTTACTTGTAATGATCTTTCTATTGTTACCTGTCTAGGGACTACTGATGTAAATTAGCATTGATGCTAACTCCAGCATGTTAACATCTTGACGTTCATTAACGAGCTCTGTCCATGTTCAGTTACTGTGaatttaaataaagttattacaGCAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3899 True 963 lncRNA 0.46 2 8229509 8240664
TU3901 False 692 lncRNA 0.35 4 8104073 8180677
TU3903 False 959 lncRNA 0.39 2 8229509 8240664
TU3905 False 963 lncRNA 0.47 2 8229509 8240664

Neighbor

gene id symbol gene type direction distance location
cdc6 cdc6,LOC102777898,LOC104942167 coding downstream 8810 8079222 ~ 8095263 (-)
taf5l taf5l coding downstream 124616 7969350 ~ 7979457 (-)
ltv1 ltv1,LOC107100359 coding downstream 172669 7915198 ~ 7931404 (-)
LOC120561073 NA coding downstream 208334 7890707 ~ 7895739 (-)
cct4 cct4,LOC102790717 coding downstream 490371 7602033 ~ 7613702 (-)
LOC120558897 NA coding upstream 57917 8298581 ~ 8332326 (-)
LOC120558865 NA coding upstream 64044 8304708 ~ 8316194 (-)
LOC120558883 NA coding upstream 117897 8358561 ~ 8363673 (-)
LOC120558917 NA coding upstream 193967 8434631 ~ 8444233 (-)
LOC120558891 NA coding upstream 209274 8449938 ~ 8457347 (-)
G2799 NA non-coding downstream 54603 8044532 ~ 8049470 (-)
G2767 NA non-coding downstream 135644 7965872 ~ 7968429 (-)
G2766 NA non-coding downstream 138808 7963266 ~ 7965265 (-)
G2759 NA non-coding downstream 243634 7813793 ~ 7860439 (-)
G2750 NA non-coding downstream 381755 7721937 ~ 7722318 (-)
G2810 NA non-coding upstream 11996 8252660 ~ 8446152 (-)
G2812 NA non-coding upstream 47922 8288586 ~ 8298002 (-)
G2849 NA non-coding upstream 63721 8304385 ~ 8358309 (-)
G2860 NA non-coding upstream 141677 8382341 ~ 8383076 (-)
G2862 NA non-coding upstream 151692 8392356 ~ 8433901 (-)
capn9 capn9 other downstream 146452 7935940 ~ 7957621 (-)
G2752 NA other downstream 340125 7739824 ~ 7763948 (-)
akt3b akt3,LOC103470003,LOC103150748,LOC100692017,LOC108246299,LOC101174244 other downstream 413486 7648842 ~ 7690587 (-)
LOC120569296 NA other downstream 731515 7331956 ~ 7372558 (-)
commd1 commd1,LOC102781613,LOC103150757 other downstream 863923 7225340 ~ 7240150 (-)
wipf2a NA other upstream 195135 8435799 ~ 8501162 (-)
G2938 LOC107098689,LOC103359055 other upstream 517985 8758649 ~ 8767973 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other upstream 665008 8905672 ~ 8908086 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 1267940 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other upstream 1284597 9525261 ~ 9567845 (-)

Expression


Co-expression Network