LOC120564702


Basic Information

Item Value
gene id LOC120564702
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7263691 ~ 7268389 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640135.1
tgtagttttttAGACTGACAAACACTGTGAGCAACAATACTGAAGATGGCTGGCCTGTGTTGGATGGCTGTGGTGCTGGTCTTCAGCCTGTCTGTTGGAAACACTAAGGCTATGGATCAGAATAAGCTtgaaaaaattgtaaaatacaTCCGGGACACGTACTCAACAAAAACCAATAGCGGACATATAAAACACTTCAGTTTGGCTGTAAACATCCTAGAGAACCAGGACCTGAACAGGCTTCAGGACCTCTTCAAAGCTgatgatttgaaaaaaaaggaagtgtACACAAGTACCAATGTGGTTACAGCAAGGCCTCTAAAGCATGAGCATGCAGAGGCACGAGTACTGGCCAACATACAACCTTTAGCTGCTAGTAGTGAGGGTAAAAGTCTGGTCTTCTATTCTTACCTTTCTCCATGTGGCCACAAGTGTACAAACCCAGAACATGACGATAATATCTTGAAATTGATTAATGAGAAGTTTCCAAAAGGCCAATGGGcagaacatgtttttgtgttttccacAATATACATAGATCAAAAGAATGAATTGTCTGACGATGAAATTAGAGACGTCCTTAAGCAACTTGGAGgaactacattacattacaacataTTCCGTTGTGACTACTCATACAACGCTCAAGCATCAGACCATTCAGGTCCATTCCAATGCATCAAGTGCTTCAGCAATGGAGCTCCAGAACCTGTTGATGAACGTTGTGTTAAAAAAGAATTCATACAGACATAAATGTGTAAAACCCAACAGGGGCTGTGGTAGAGTTGCCATGGAGTAGAGGAGTTCTGGGCTCTACTGTTTTAGGCCAAAATGAtgggaaacaaacacaaacacaactggaTCCTACTGAAATTACATTTAAAGAAATTGATTGATTTATGCCTAGCGATGCGCTTTCTCCTTTAAACTACAGTACAAGCTTAATAAAGTGACACGCTggggacacaaacacatgtcaGAAGTTTGCTTTGGTCCAATCATTAACCAGCATTTTCCTGCACACAAGGTTTTAAGTGATTGTTTACCTTAACACGGACTGATTTTGGGGTTCTTCCATTTAACTGTTGTGAATTACCAAATGCCTGCTCTTAATGGTTGAGTCTCTTTAAatcagagtgtggtctagacttagtctatctgtaaagtgtcctgagataactacTGTTATAATTAATAAGAATCATGTCCTTCAATGACTCTCAGTGGTTTTAGGTTAGGAGGAATTTtctgtcctatccaaataaaaaactaaactaactgAAATATGGTAGACTGCTGCGGAGTTTAAACAGCCAGACAATTAAATGTTTAAGTGTATTATAATTATTGCCAATataaacaaaattgaaaaagaTTTGAGATTTTGAACTGAGATTTGGTGAAAAAGTAGGCTGACTCCATTCAACCTAAACAGTTACTGTAACTCTGAgaataaaactaaacatattcTACCCTATTTCAAAAAGTCAAAGAGTAAAAATGTTGTTTATCAAATACTAATCATGTTAAATGTGGATGTTTAATGTGTATCAACCTCAGTATTTACATGAATCATGTCATTGTACTCAATACTTGTGTAAAGCAAACTGAATCCTCTGatgttctgctctttctgaTTAAAGCTTAGCTCAGCATCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640135.1 True 1659 lncRNA 0.38 3 7263691 7268389

Neighbor

gene id symbol gene type direction distance location
LOC120562943 NA coding downstream 8346 7249581 ~ 7255345 (-)
LOC120565981 NA coding downstream 17278 7241820 ~ 7246413 (-)
b3gnt2a NA coding downstream 39829 7158870 ~ 7223862 (-)
zgc:66455 NA coding downstream 108368 7140734 ~ 7155323 (-)
LOC120569746 NA coding downstream 468083 6795494 ~ 6795608 (-)
LOC120565143 NA coding upstream 24158 7292547 ~ 7307876 (-)
usp34 NA coding upstream 172681 7441070 ~ 7551615 (-)
xpo1a xpo1,LOC103359566 coding upstream 285643 7554032 ~ 7582024 (-)
LOC120569612 NA coding upstream 289378 7557767 ~ 7557898 (-)
LOC120569585 NA coding upstream 303932 7572321 ~ 7572457 (-)
G2392 NA non-coding downstream 95864 7166432 ~ 7167827 (-)
G2367 NA non-coding downstream 136282 7126802 ~ 7127409 (-)
G2362 NA non-coding downstream 177406 7085358 ~ 7086285 (-)
G2360 NA non-coding downstream 182223 7081247 ~ 7081468 (-)
trnae-uuc_9 NA non-coding downstream 220673 7042947 ~ 7043018 (-)
LOC120568064 NA non-coding upstream 3430 7271819 ~ 7276543 (-)
LOC120568185 NA non-coding upstream 165527 7433916 ~ 7441067 (-)
G2451 NA non-coding upstream 168085 7436474 ~ 7438272 (-)
G2743 NA non-coding upstream 363985 7632374 ~ 7633344 (-)
G2732 NA non-coding upstream 373733 7642122 ~ 7662768 (-)
commd1 commd1,LOC102781613,LOC103150757 other downstream 23541 7225340 ~ 7240150 (-)
trnae-uuc_1 NA other downstream 240503 7023117 ~ 7023188 (-)
trnae-uuc NA other downstream 242046 7021574 ~ 7021645 (-)
LOC120571633 otx1,LOC102233826 other downstream 246032 6999171 ~ 7017659 (-)
LOC120565104 peli1,LOC103372217,LOC100709940,LOC102294912,LOC101486541,LOC108247092,LOC107382286 other downstream 324704 6889288 ~ 6938987 (-)
LOC120569296 NA other upstream 63567 7331956 ~ 7372558 (-)
akt3b akt3,LOC103470003,LOC103150748,LOC100692017,LOC108246299,LOC101174244 other upstream 380453 7648842 ~ 7690587 (-)
G2752 NA other upstream 471435 7739824 ~ 7763948 (-)
capn9 capn9 other upstream 667551 7935940 ~ 7957621 (-)
G2840 NA other upstream 938863 8207252 ~ 8209535 (-)

Expression


Co-expression Network