G89795


Basic Information

Item Value
gene id G89795
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 34138389 ~ 34140452 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU120852
TcatctgcaattttctttttatttgacagcaacaacatttggtatgaaaaTAAGTTTATCTTGTAAGTAAATTAGAGTCTAACCTGAGACCTGGATACAGTAAATACTGTATGATTTAACTGAGCACAAAATATATAGACCAGAGGATTAAGTCTAGTCAATACAAACATGTGGGAGACTTTGTAAACCAAAAAGACTAAGctgaaaacaaaatgcaaacTTTGGAGTTGTGCCCATACAGGAAAAAAATGTATGCCTGGTAGTTCATCTTAAAATGAATTACTTGTAGGTAAATTACGAGTTTCCCTGTTTATTGTGTATGGAGCAGATCCAGATTTTGTGTTACAATGATGGAAGGCTTCACTCTGAATGGAATTCTCCCTTAAGACTTCTATTAGCATCTTGATGTTAAGCCTGATACAACTGGTCTAAGAGGCGCACTGCTGATCTAGGATTTCTCTGACCTTTGCGGCTCTAATGAATTAGACAGTCAAGGGGACCTGGCAGGAGGTTCCACATCAGTGCAGAGAAGATTGAAAATTGCAGCAGCTATTATAGCCCTCTCTGATTTTACACTGTTGTGATCTCTTGGTGTACAAAAAAAGCTGATCTGAATGCAATCCACCCCAGAAAAAAACCTATTACATCACGTCTGCTGGATCAGATTGCCCTTTGATTTTAGGTATTTCCTCCAGAATGTAGGCTACTGTTCTTATATTGCGATTCTATTGTAGACAAGCTTTTCAGAAAGTGATTCAGCTAAAACATGGAATCTGACAAGGATTAGGATTGACATGCCATTTccattttgtcatattttttcatcaataaatacattagatcattaaaataagTGATTTGCCTACTTCAAATCTAATTAGTAGCAAGTATTATTTAACATTGTTAATAACAAGCAATCACAAAATAAAGGAAATCTGCCAGTTGATCCTATTTGATTGCAATACTTATTTAATATATTCTCTCTAATCATTTTATGTGGATTCACTTCTAAAACCCTGCTAGAGAAGTAATTGGCTTTTTCCTCTATCCCTGCACCAACATGTCAAGGCCAACACATAGTGCACAGTGTCTCTGGAATACATCTTAATCTAGTAGTGAGCAGCATAAACTGACCATACAATTGTCtaatatgaatataaatataaaggTTCAGCCACCAGAGAGGTCCCAGTCTTTTTGTATGCTACCACTGCCTTAACAGGTCCCTGTATTGTAAAGGGAAAACCCAAACAACCCTGTAGCACTAAAGCAGGTAGGAATACAGTACATACCAATGAGGGTTGTAAGATAGCCACCACTTTATTCCTATTGCATTAATTGATCCATGATCTGGGAGAACATGGGCATTTTAAATATGGGAACTGTTTACTGTATTCACAAGTAGCCACCCCAATACTCTGGATTTGGATTCAAATACACACAGCAAaagtcaaagtttttttttcctccagtggTTTAAATTCCTTAGCTCGCAGCAATGATGTAAAGTGTACTCCAAGATGTGTCAgtacactgtgacatcactgctgGGTGTGGGTACAGGTATATACTTCTGACCACACCAACCACAGGCAACAGTGATGCTTGCCGTGGTCCGTCCGTGGAATCTACTTGAGACTTTCAACCAGCAAAGGCTGGTGCAACAGTGTGATTCAGCCTGGTGTTAAATTACTCTCTAAGTGTTTCAAGGGTTTTGGTAATCATGTACTAATTATCCTTATTTGCCCCAAACGATTGGACAGTGCTAAACCAAAAAcggtcaaaaataaataaataaatgaagccGAAGCATGACTTCTATTAAAACTTTTACATTAATGGCTAACTGCTAATTGTTGCTCTTTCAATTCATAGATATCACACCTCCAAAGGACAAATTTAACTAGCTGTTAGAAATAGGGTTGTCGCGGTTTGACTGTAAGTTCACGGTTCGattacattttcaatgaaaaaaaatgttcaggGGTGACGGCAATGCCACAATTagagccactagatggcagaaagGTACTTTAAAACAACAGTTTGACTTTCTCAGAGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120852 True 2064 lncRNA 0.37 1 34138389 34140452

Neighbor

gene id symbol gene type direction distance location
hydin NA coding downstream 18820 33982304 ~ 34119569 (-)
necab2 necab2 coding downstream 156950 33798996 ~ 33981439 (-)
ranbp10 ranbp10 coding downstream 705060 33392334 ~ 33433329 (-)
det1 det1 coding downstream 792015 33330835 ~ 33346374 (-)
map1lc3b map1lc3b coding downstream 819488 33304714 ~ 33318901 (-)
LOC120564294 LOC104959125 coding upstream 209627 34350079 ~ 34362380 (-)
LOC120563681 LOC108415768,LOC100698998 coding upstream 288307 34428759 ~ 34429815 (-)
LOC120563674 LOC102308624,LOC101464672,LOC100707722,LOC105926568 coding upstream 477850 34618302 ~ 34633809 (-)
LOC120563673 NA coding upstream 498856 34639308 ~ 34674254 (-)
LOC120563671 LOC102308624,LOC101464672,LOC100707722 coding upstream 589630 34730082 ~ 34748975 (-)
G89787 NA non-coding downstream 126744 33951432 ~ 34011645 (-)
G89749 NA non-coding downstream 380284 33757900 ~ 33758105 (-)
G89747 mbtps1,LOC101077992,LOC102792102,LOC104967680 non-coding downstream 381885 33754768 ~ 33756504 (-)
G89729 NA non-coding downstream 426051 33710822 ~ 33712338 (-)
G89730 NA non-coding downstream 427713 33710299 ~ 33710676 (-)
G89797 NA non-coding upstream 3637 34144089 ~ 34151346 (-)
G89848 LOC104959125 non-coding upstream 85258 34225710 ~ 34332902 (-)
LOC120563686 NA non-coding upstream 116796 34257248 ~ 34260186 (-)
LOC120563687 NA non-coding upstream 133862 34274314 ~ 34277404 (-)
G89854 NA non-coding upstream 195003 34335455 ~ 34339258 (-)
znf319b znf319,LOC102797175 other downstream 1225359 32906005 ~ 32913030 (-)
fa2h fa2h,LOC106937201,LOC102797665,LOC107674969,LOC107707436,LOC107589178,LOC104955910,LOC107714073 other downstream 1286894 32786798 ~ 32851495 (-)
G89365 NA other downstream 2030323 32106623 ~ 32108066 (-)
G89241 NA other downstream 2869920 31243168 ~ 31268469 (-)
G89085 NA other downstream 3415886 30722108 ~ 30722503 (-)
G89849 mmyhl2,mmyhl1 other upstream 83809 34224261 ~ 34225516 (-)
G89870 LOC105899468,LOC106564289,LOC105009107,LOC106597831,LOC106591119,LOC103392864,LOC106597772 other upstream 150351 34290803 ~ 34331996 (-)
G89873 LOC100698998,LOC102198497,LOC102789814,LOC102294989,LOC101481490 other upstream 174079 34314531 ~ 34315143 (-)
LOC120563661 LOC102294989,LOC101481490 other upstream 239609 34380061 ~ 34446136 (-)
psme3ip1 fam192a other upstream 454757 34595209 ~ 34612162 (-)

Expression


Co-expression Network