G89747 (mbtps1,LOC101077992,LOC102792102,LOC104967680)


Basic Information

Item Value
gene id G89747
gene name mbtps1,LOC101077992,LOC102792102,LOC104967680
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 33754768 ~ 33756504 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU120793
GCTTTGATTATGCTTTTTAATTGATGAGATATAATTGAACAAGTCTTTCAATGCTACTTTGTTAACCATGAGATCATGGAGGAGATCGCCTGGCCAGAGTTCattcattatataaaatataaaaacaatgaaaagacaGTGAATTGAAACAGATATGGGCAGGACTTAGAAAACAGTGGGTGGTGACACAGGAGAAGACAACTTGATCATCCAATGGTCCttgtgttgtgtgcgtgtgtgtgcgtgtgtgtgtgagagcgcatGAATCTCTTGTACTTCTGAGTATGTGTGTTAAGGGCACGAACAAATTCAATAAATATAAAAGTCAGacacatttcattcataaagaaAACTGTTTGGTCAAAGAAGAGCCAGGGAAATGTAGACAACATGTCTGTCTCCAACAGGCATGTTTAGGGCCAGGTGTACACTGtgtgtacatgttttttttaatatcgtGTGTGTGACATTGTCTAATACTGTTCAGTAGTCCACAAACAATCGCCCGCGGACGGGGCTCGAACAGACAAGAGGCACACAAACTGCATCGGCTTCCGAGAGACGCCCGGGAGTACGTTCACCTCCGGGCCCTGTCTCGAAGTTTAAAGAGTCAGACGTCTGCCTCGACAGTTCATTAGACTCCATGTCATTCCACACCTCCACTGTTGCTACTCAACGCAAGCCGTCCGTTTACCAGCGTCTCAGTTTTTGGGAGGCGAATCCagctctccagcagcagcagctcggaGTTACAGTCCCATTCAAACGCTGGGGGTTCTCCCAGCCGtcgtctgctgctgctgctgctgctgctggagataCGTGGGCCGTTTGATGCGGGGCTTCCTGCGCTTGGGCTTGCTCTTGGACTTTGTGAGCTGGACCACGAAGAAGGACAGGACGACCATGGCTCCCAGGAAGGCAAACACTGGGATGGTCTGGCCCACCTCTTGGTTGTAGCGGCCGGGCATTATCCCTGAGGGGACTCCCGGGATGTCCCAGGCTCCACTCTCCCCAGGAGACAGAGGTCTGACCTGGGGACGGTAAGCCCTCACGTTGGGCAGAGCCACTTTGTCCAGATCCACTGAGAGAAGCTTCTGGTGCTTCCACAGGTTACTGAGAGCACAGCAGggagagacacaaacaacaagaaagagagagagagagagagagaggctgagacAGATTTTAATGTATACAATGAAATGTGTGCATGCTAGGGATgccaatttatatatatttttttttcccccagagcGATCACCAA

Function

symbol description
mbtps1 Predicted to enable serine-type endopeptidase activity. Acts upstream of or within cartilage development; lipid metabolic process; and liver development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including axial chorda mesoderm; axis; margin; pleuroperitoneal region; and tail bud. Human ortholog(s) of this gene implicated in spondyloepiphyseal dysplasia Kondo-Fu type. Orthologous to human MBTPS1 (membrane bound transcription factor peptidase, site 1).

NR:

description
PREDICTED: membrane-bound transcription factor site-1 protease

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120793 True 1267 lncRNA 0.49 2 33754768 33756504

Neighbor

gene id symbol gene type direction distance location
ranbp10 ranbp10 coding downstream 321439 33392334 ~ 33433329 (-)
det1 det1 coding downstream 408394 33330835 ~ 33346374 (-)
map1lc3b map1lc3b coding downstream 435867 33304714 ~ 33318901 (-)
lcat lcat,LOC103142508 coding downstream 811200 32932422 ~ 32943568 (-)
pla2g15 LOC103379465 coding downstream 822472 32919453 ~ 32932296 (-)
necab2 necab2 coding upstream 42492 33798996 ~ 33981439 (-)
hydin NA coding upstream 225800 33982304 ~ 34119569 (-)
LOC120564294 LOC104959125 coding upstream 593575 34350079 ~ 34362380 (-)
LOC120563681 LOC108415768,LOC100698998 coding upstream 672255 34428759 ~ 34429815 (-)
LOC120563674 LOC102308624,LOC101464672,LOC100707722,LOC105926568 coding upstream 861798 34618302 ~ 34633809 (-)
G89729 NA non-coding downstream 42430 33710822 ~ 33712338 (-)
G89730 NA non-coding downstream 44092 33710299 ~ 33710676 (-)
G89717 NA non-coding downstream 166127 33587975 ~ 33588641 (-)
G89698 NA non-coding downstream 222963 33465402 ~ 33531805 (-)
G89749 NA non-coding upstream 1396 33757900 ~ 33758105 (-)
G89787 NA non-coding upstream 194928 33951432 ~ 34011645 (-)
G89795 NA non-coding upstream 381885 34138389 ~ 34140452 (-)
G89797 NA non-coding upstream 387585 34144089 ~ 34151346 (-)
G89848 LOC104959125 non-coding upstream 469206 34225710 ~ 34332902 (-)
znf319b znf319,LOC102797175 other downstream 841738 32906005 ~ 32913030 (-)
fa2h fa2h,LOC106937201,LOC102797665,LOC107674969,LOC107707436,LOC107589178,LOC104955910,LOC107714073 other downstream 903273 32786798 ~ 32851495 (-)
G89365 NA other downstream 1646702 32106623 ~ 32108066 (-)
G89241 NA other downstream 2486299 31243168 ~ 31268469 (-)
G89085 NA other downstream 3032265 30722108 ~ 30722503 (-)
G89849 mmyhl2,mmyhl1 other upstream 467757 34224261 ~ 34225516 (-)
G89870 LOC105899468,LOC106564289,LOC105009107,LOC106597831,LOC106591119,LOC103392864,LOC106597772 other upstream 534299 34290803 ~ 34331996 (-)
G89873 LOC100698998,LOC102198497,LOC102789814,LOC102294989,LOC101481490 other upstream 558027 34314531 ~ 34315143 (-)
LOC120563661 LOC102294989,LOC101481490 other upstream 623557 34380061 ~ 34446136 (-)
psme3ip1 fam192a other upstream 838705 34595209 ~ 34612162 (-)

Expression


Co-expression Network