G89848 (LOC104959125)


Basic Information

Item Value
gene id G89848
gene name LOC104959125
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 34225710 ~ 34332902 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU120949
TTTACCTTTGCTTTAGCAACATTCTCCATGTTGCTGGAGAGGTCATCAATCTCCATCTTGTATTCACTCTTTTCCTTCTCAAGCTTCTGCTTTACACGCTGGAGGTTGTCGATCTGCTCTCCCAGCTCAGCAACGCTGTCAGCCTGCTTCTTgcgaagagcagcagcagtggcttCATGCTGCAGAGTGGACTCCTCAAGATCACGACGGAGCTTCTGGAACTCGGCTTCACGCTTCTTGTTCATCTCAATCTGAGAAGCAGTGGCACCACCGGCCTCCTCCagcctctcactgatctcctcaAGTTCACGACGGAGCTTCTGGAACTCGGCTTCACGCTTCTTGTTCATCTCAATCTGAGAAGCAGTGGCACCACCGGCCTCCTCCAGCCTCTCACTGAT

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120949 True 401 lncRNA 0.52 3 34225710 34332902

Neighbor

gene id symbol gene type direction distance location
hydin NA coding downstream 106141 33982304 ~ 34119569 (-)
necab2 necab2 coding downstream 244271 33798996 ~ 33981439 (-)
ranbp10 ranbp10 coding downstream 792381 33392334 ~ 33433329 (-)
det1 det1 coding downstream 879336 33330835 ~ 33346374 (-)
map1lc3b map1lc3b coding downstream 906809 33304714 ~ 33318901 (-)
LOC120564294 LOC104959125 coding upstream 17177 34350079 ~ 34362380 (-)
LOC120563681 LOC108415768,LOC100698998 coding upstream 95857 34428759 ~ 34429815 (-)
LOC120563674 LOC102308624,LOC101464672,LOC100707722,LOC105926568 coding upstream 285400 34618302 ~ 34633809 (-)
LOC120563673 NA coding upstream 306406 34639308 ~ 34674254 (-)
LOC120563671 LOC102308624,LOC101464672,LOC100707722 coding upstream 397180 34730082 ~ 34748975 (-)
G89797 NA non-coding downstream 74364 34144089 ~ 34151346 (-)
G89795 NA non-coding downstream 85258 34138389 ~ 34140452 (-)
G89787 NA non-coding downstream 214065 33951432 ~ 34011645 (-)
G89749 NA non-coding downstream 467605 33757900 ~ 33758105 (-)
G89747 mbtps1,LOC101077992,LOC102792102,LOC104967680 non-coding downstream 469206 33754768 ~ 33756504 (-)
G89854 NA non-coding upstream 2553 34335455 ~ 34339258 (-)
G89931 NA non-coding upstream 360105 34693007 ~ 34694592 (-)
G89925 NA non-coding upstream 404833 34737735 ~ 34738773 (-)
G90030 NA non-coding upstream 619042 34951944 ~ 35055222 (-)
G90028 NA non-coding upstream 642431 34975333 ~ 35022207 (-)
G89849 mmyhl2,mmyhl1 other downstream 194 34224261 ~ 34225516 (-)
znf319b znf319,LOC102797175 other downstream 1312680 32906005 ~ 32913030 (-)
fa2h fa2h,LOC106937201,LOC102797665,LOC107674969,LOC107707436,LOC107589178,LOC104955910,LOC107714073 other downstream 1374215 32786798 ~ 32851495 (-)
G89365 NA other downstream 2117644 32106623 ~ 32108066 (-)
G89241 NA other downstream 2957241 31243168 ~ 31268469 (-)
LOC120563661 LOC102294989,LOC101481490 other upstream 47159 34380061 ~ 34446136 (-)
psme3ip1 fam192a other upstream 262307 34595209 ~ 34612162 (-)
G89928 NA other upstream 343341 34676243 ~ 34678101 (-)
G90055 LOC105899468,LOC106591119,LOC106564289,LOC106564211,LOC106594866,LOC106597831 other upstream 811487 35144389 ~ 35171683 (-)
G90150 NA other upstream 1534111 35867013 ~ 35867311 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location