XLOC_004683 (arsg)


Basic Information

Item Value
gene id XLOC_004683
gene name arsg
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 20583552 ~ 20600378 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009274
TTAGATGTAAACAACGACTGAACTACTTTCACATAAATCATCGAACAGCATTAGATTTGACATTTAAATGGCGCAGTTGGGATTTTGTACACTGCTTGTTTTTTCCGGCCTGCTCCATCACATCAAAAGCCATATTAAAAAAGAAGACAACCCTGAAGGGAAGGAACGACCCAATTTCATCATTATCTTAGCTGATGATATTGGATGGGGAGACCTCTGGTTAAACAGGCCTGACAACTCCACACCAACACCCTGGCTGGACTCATTAATGCTGAAGGGCAAACGATTCACAGACTTCCACTCTCCTGCCTCCACATGTTCTCCATCTCGCGCCTCCATCCTGACCGGCAGACACGGCCTACGCAATGGGGTCACTCATAATTTTGCAGTAGGGTCAGTAGGAGGATTACCTCTTAATGAGACCACGTTTGCTCAGCTCCTGCATGATGAAGGTTATTACACAGCTATGATCGGAAAATGGCATCTTGGACACAATGGTTCTTACAGTCCTGTTCATAGAGGTTTTGACTATTACCTGGGTATTCCCTACAGTAATGACATGGGCTGCACTGACAAACCAGGCCTTGACCTTCCCAGCTGTCCTCCCTGTGTACATAGTCAGTATAGTATTAATAAGAAGCATGAGGGATGCTACACCAAAGTGGGATTACCTCTGTTTGAAAATGAGAAGATTATTGAGCAACCCTTGGACACATGGAGCCTTAAAGACAGATATGCAACAGCGGCAGTCCAGCAGATTTTCACAGCCAGTGTTACTAAGAAGCAGCCGTTCCTCCTATATGTGGCTCTCGCTCACATGCATGTGCCGCTGTTCCATAACACCTTCCTAAATGTCACAACTGAAGACCCCTACACAGCCAGTCTCAGTGACATGGACTCACTTGTGGGCAATATCGTGCAGGCGCTCATCACTGAACAGTTGGAAAACACCCTCATATGGTTCACTGGTGACAATGGCCCTTGGGAGCAGAAATGCCTGTTTGCTGGGCATGTTGGGCCTTTTGTTGGAAGATGGCAGACAAATAAAGGTGGCGGATCAGCAAAGAGAACCACATGGGAAGGAGGTCACCGTGTTCCCACAGTCGTCTCATGGCCTAAGAAGATCAAACACAACAGCTCAAGTGATGCCCTGCTGAGTGGTCTGGATATCTTTCCAACTGTCCTCTCTCTGGCTGGGGTCAAACCTCCATCAGATCGACGCTATGATGGCATTGATATTACTGATGTTCTGCTCAACGACTCTGAAACAGGGCATGAGagTCTCATGCATCCAAACAGTGGCGCTGCAGGACAATATGGTGACCTTCAGACTGTCAGACTCAAACATCACAAGGCATTTTACATCACAGGCGGATCAGTGGCATGTGATGGAGAAAGTGGACCTCAGCAACATCACGACCCTCCATTGATATTTGACCTCTCTCAGGACGAGGCAGAAGAGACGCCTCTGGACCCCGAGAGCAAGGAGTTCAGATCTGTCCTGAAGCAggtggagagggagagagaggctCTGCTCTGGGACATCGCCACAGATCGAGTCTCAGCGGCCGATTACACTGTCATTCCCTCTGCTGAGCCCTGCTGTGAGCCACAAAACCCCGTCTGCCGCTGTCACCGCCTGAAATGAGGTCAGTGGCTCAGCACTGCTGCACAACTCATTAttagaattaattaataatgttgtgtttaaaaaatacaattattggttGCTGATACAAACAGATTACAAACAGATTGACTATGTTGGATTTTAACTAATATTAagagatttaagataagtcttttgttgctccagaatgtgtctgtaaagtttcagcttaaaacacccatgaGATTtgttcaagagtttacacttttgctgatgattgattgtaaagcttgtttggcatgctgttccgggggagagccctgagcttgtaagatcctcgagcccggggcttcctctcgtttgcaaggtgagaggagagtttgagctcaggtagatcttgagaactcctctgctgtagtagctaatgaacagatagtgattgctcttaagatataactacttactaggagcatgtttatgatgccaatttggattagtcaattaacttaagttgaatgtttttggacggtgggaggaaacaaGGGAACCCAAGGGAAACCCACGTAAGCATGGGGagaactctaaggccccgtttacactaatgcgttttagtttgaaaatggaATGTGGATGGAATGTTTTTTAAGaggttgttttatttgtttttgttttttggtaattAAACTGAAATGTTAAATGAA
>TCONS_00009275
GGTTCTTACAGTCCTGTTCATAGAGGTTTTGACTATTACCTGGGTATTCCCTACAGTAATGACATGGGCTGCACTGACAAACCAGGCCTTGACCTTCCCAGCTGTCCTCCCTGTGTACATAGTCAGTATAGTATTAATAAGAAGCATGAGGGATGCTACACCAAAGTGGGATTACCTCTGTTTGAAAATGAGAAGATTATTGAGCAACCCTTGGACACATGGAGCCTTAAAGACAGATATGCAACAGCGGCAGTCCAGCAGATTTTCACAGCCAGTGTTACTAAGAAGCAGCCGTTCCTCCTATATGTGGCTCTCGCTCACATGCATGTGCCGCTGTTCCATAACACCTTCCTAAATGTCACAACTGAAGACCCCTACACAGCCAGTCTCAGTGACATGGACTCACTTGTGGGCAATATCGTGCAGGCGCTCATCACTGAACAGTTGGAAAACACCCTCATATGGTTCACTGGTGGCGGATCAGCAAAGAGAACCACATGGGAAGGAGGTCACCGTGTTCCCACAGTCGTCTC

Function

symbol description
arsg Predicted to enable arylsulfatase activity. Human ortholog(s) of this gene implicated in Usher syndrome. Orthologous to human ARSG (arylsulfatase G).

GO:

id name namespace
GO:0008484 sulfuric ester hydrolase activity molecular_function
GO:0004065 arylsulfatase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG:

id description
ko04142 Lysosome

ZFIN:

id description
ZDB-GENE-060503-154 Predicted to enable arylsulfatase activity. Human ortholog(s) of this gene implicated in Usher syndrome. Orthologous to human ARSG (arylsulfatase G).

Ensembl:

ensembl_id ENSDARG00000101715

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009274 False 2310 mRNA 0.45 12 20583552 20600378
TCONS_00009275 True 533 mRNA 0.48 5 20587179 20596758

Neighbor

gene id symbol gene type direction distance location
XLOC_004682 AMZ2 coding upstream 8171 20567382 ~ 20575381 (+)
XLOC_004681 gna13a coding upstream 18874 20552190 ~ 20564678 (+)
XLOC_004680 si:zfos-754c12.2 coding upstream 75193 20506197 ~ 20508359 (+)
XLOC_004679 NA coding upstream 78751 20491619 ~ 20504801 (+)
XLOC_004678 arhgap17a coding upstream 101491 20412293 ~ 20482061 (+)
XLOC_004684 si:dkey-220f10.4 coding downstream 17958 20618336 ~ 20625630 (+)
XLOC_004685 stx4 coding downstream 26786 20627164 ~ 20652923 (+)
XLOC_004686 mxra7 coding downstream 66923 20667301 ~ 20677982 (+)
XLOC_004687 st6galnac1.1 coding downstream 77809 20678187 ~ 20685624 (+)
XLOC_004688 st6galnac1.2 coding downstream 90932 20691310 ~ 20785149 (+)
XLOC_004675 NA non-coding upstream 318087 20263585 ~ 20265465 (+)
XLOC_004670 NA non-coding upstream 1124267 19458809 ~ 19459285 (+)
XLOC_004667 BX649366.2 non-coding upstream 1195279 19388143 ~ 19388273 (+)
XLOC_004660 NA non-coding upstream 1312396 19267759 ~ 19271156 (+)
XLOC_004689 NA non-coding downstream 206519 20806897 ~ 21106987 (+)
XLOC_004691 FO704814.1 non-coding downstream 836968 21437346 ~ 21437458 (+)
XLOC_004694 NA non-coding downstream 1157439 21757817 ~ 21799396 (+)
XLOC_004695 NA non-coding downstream 1417568 22017946 ~ 22019770 (+)
XLOC_004696 NA non-coding downstream 1658584 22258962 ~ 22304841 (+)

Expression


Co-expression Network