Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_004687 |
| gene name | st6galnac1.1 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 20678187 ~ 20685624 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| st6galnac1.1 | Predicted to enable sialyltransferase activity. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Is expressed in brain; gill; integument; liver; and pleuroperitoneal region. Orthologous to human ST6GALNAC1 (ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1). |
| id | name | namespace |
|---|---|---|
| GO:0006486 | protein glycosylation | biological_process |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0016740 | transferase activity | molecular_function |
| GO:0016757 | transferase activity, transferring glycosyl groups | molecular_function |
| GO:0008373 | sialyltransferase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041014-160 | Predicted to enable sialyltransferase activity. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Is expressed in brain; gill; integument; liver; and pleuroperitoneal region. Orthologous to human ST6GALNAC1 (ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1). |
| ensembl_id | ENSDARG00000043814 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00009284 | True | 1256 | mRNA | 0.41 | 9 | 20678187 | 20685624 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_004686 | mxra7 | coding | upstream | 205 | 20667301 ~ 20677982 (+) |
| XLOC_004685 | stx4 | coding | upstream | 25264 | 20627164 ~ 20652923 (+) |
| XLOC_004684 | si:dkey-220f10.4 | coding | upstream | 52557 | 20618336 ~ 20625630 (+) |
| XLOC_004683 | arsg | coding | upstream | 77809 | 20583552 ~ 20600378 (+) |
| XLOC_004682 | AMZ2 | coding | upstream | 102806 | 20567382 ~ 20575381 (+) |
| XLOC_004688 | st6galnac1.2 | coding | downstream | 5686 | 20691310 ~ 20785149 (+) |
| XLOC_004689 | NA | coding | downstream | 121273 | 20806897 ~ 21106987 (+) |
| XLOC_004690 | ca10a | coding | downstream | 612693 | 21298317 ~ 21553637 (+) |
| XLOC_004691 | FO704814.1 | coding | downstream | 751722 | 21437346 ~ 21437458 (+) |
| XLOC_004692 | mrpl27 | coding | downstream | 998615 | 21684239 ~ 21688087 (+) |
| XLOC_004679 | NA | non-coding | upstream | 173386 | 20491619 ~ 20504801 (+) |
| XLOC_004675 | NA | non-coding | upstream | 412722 | 20263585 ~ 20265465 (+) |
| XLOC_004670 | NA | non-coding | upstream | 1218902 | 19458809 ~ 19459285 (+) |
| XLOC_004667 | BX649366.2 | non-coding | upstream | 1289914 | 19388143 ~ 19388273 (+) |
| XLOC_004660 | NA | non-coding | upstream | 1407031 | 19267759 ~ 19271156 (+) |
| XLOC_004694 | NA | non-coding | downstream | 1072193 | 21757817 ~ 21799396 (+) |
| XLOC_004695 | NA | non-coding | downstream | 1332322 | 22017946 ~ 22019770 (+) |
| XLOC_004696 | NA | non-coding | downstream | 1573338 | 22258962 ~ 22304841 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
