hook1 (hook1,LOC102781169)


Basic Information

Item Value
gene id hook1
gene name hook1,LOC102781169
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28565474 ~ 28578058 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810539.1
AGTGAGCAAACGCCAAGAAGCTGCGCAATTCGCGATTTCGCGTACATCTTACGTTATTTTATGGCGGAGCAGCCGGCGTGGCTCTCTAATGTACGCAATTGTCGTTAGAGAGCCTACCTCTCTTTACAGCAGGTGAGGTCAAATGCAGAGGAAAGGAGCGGAAGGGCTTTGCTGACAGGTGGAGGAAAATACTTAAGTTTTGagctaaaaaaataacaaatggaCGACGATAACACGATACTGACCGAGAGCCTCGTAATATGGCTGCAGACCTTCAACACTCCTGCACCCTGCAGAACAGTGGAGGAGCTGACCACTGGAGCGGCAATATCACAAGCACTGCATCAAatAGACCCAGCGTGGTTCACTGATGGATGGCTGGGTCGTATCAAAACAGATGTTGAGGATAACTGGAGACTGAAGATGAACAACCTGAAGAAGATCCTTCAGATGGTGATTGATTATTATAATGAGGTCTTAGCCCAGGAAATCTCAGACTTCCCCTTGCCAGATCTGTCTCTGGTGGCAGAGCATTCACACTCCGTGGAGCTGGGGAGGCTGCTGCAGCTCGTATTGGGCTGTGCTGTCAGATGTGAGCGTAAACAAGAATACATTCAGATCATCATGACCTTGGAGGAGTCTGTGCAgcatgttgtcatgacagccaTCCAGGAGCTCATGAGTAAAGAGATCATGGCCCCGTTTGGAGCAGAACTGTCAGGGGACTTGGAACAGCAGTTGAAAAAAGCCCTAGAAGAACTCACTGAACTTCTAGCAGAGAAGGAAGCGTTAGCCCAACGCTGTCAAGAGCTGGACATACAGGTGGCTGTTCTGCAAGAGGAACGGAACAGCTTATTGGCTGAGAATGACGTCCTAACGGACCGAGCCAATCAGCTGGACACATTCGACGACCCAAGCACCCCGTCAGGAAGGAAACACAGCCAGTTGCAGCAACAGTTCGAGGCACTGCAGGAGGAGAACTTCAGGCTGGAGGCTGCTAAGGATGACTACCGGATCCACTGTGAAGAGTTGGAGAACCAGCTGATCGAGGTTCAGCACCGTAACGACGAGCTCACCAGCCTGGCAGAAGAGTCTCGAGCCCTCAAAGATGAACTGGACGTTCTGAGGAACTGCTCAGATCGGGTGGTGATGCTGGAGGCCTCAGTGGATACATACAAACGTAAACTGGAGAATCTAGGTGATCTGAAGAGGCAAATGaagctgctggaggagaacaACATGACTTACATGCACAACACTGTCAGCTTGGAGGAAGAACTGCGCAAGGCCAACGCTGCCCGCGCACAGCTTGAGACATACAAGAGACAGGTCCAGGAGCTACACAGGAAGTTGTCTGAGGAGTCGCGGCGAGCAGACAACCTGGCCTATGAGATGACCAAATTGGAGGAAAAACACGAAACCTTGATGAAGGAGAAAGAGAGGACAATCATCGAGAGAGATTCTCTGAAGGAGATCAATGAGGAGCTGCGATGCACTCAGGCTCAACAGCACCAGCTTTCCCAAGCAGGCATTCTTCCTTCTGCCAGCCCTAGCCATGATAACCTGGCAGCTGAATTAATACCCATTGAGTACAGAGAAAGGTTCATCAGGCTGCAGCATGAGAACAAGATGCTGAGAGTGCAGCAGGAGGAGTGTGAGAGGGAGAAGATCGCCACACTGCAGGCCCAGCTGGAGGAAGCACATAAGACGCGCAGTGAACTGGACACCGAGAACAGATTGAGTCGAGAGCGGATCAGcgagctgcagcagcaggtgGAGGACCTACAGAAGGCTCTGCAGAGCCAGGCGGCCAAACCTGATGATTCAAACCTGAAGCGGAAACTCGACGCGCACATGGTCCAGCTGAACGAGGCTCAGGACGAAATCATGAAGAAGAAAGAGCTGCTGGAGGACCTTCAGCCTGACAACACGCAAACTTCCTTGAAGCTGGATGAGTTGATGGCTGCTCTGAAGAAGAAGGATGACGACATGAGGGCCATGGAAGAGAGGTACAAAATGTACCTGGAGAAAGCTCGCAACGTTATCCGAGCGCTGGATCCAAAGCTAAATCCAGCCACCGCTGAGATCCAGGCCCTGAGGAACCAGTTAGCAGATCGGGACAAGCAGTTTCTCAACCTGGAACGTCAATGTGAGCAGGCCAAACTGAGAGAGTATGAGGAGAAGCTAATCGTCACTGCGTGGTATAACAAGAGTCTAAACTTTCAGAAGCTGGCGATTGAATCCCGTCTCGGTGGCTGCACCTCCTCCGTGCTGTCCCCCGGCCAGTCCTTCTTGTCCCAGCAGCGACAAGTCTCAAACGCCCCACGCCGTGCGCTTTCCATCAGCGTGCCTGCCACTACCTCCAAGTAGACCTTGTCATAGAGCCAAATGGATCCCGTTTATTCAGTTAAGGGATGCATACTctccctcactccctccctcccaccagTGAGCACTCAAGTGACCTTAAACACACTCTGCTCTTGGTGCTTGTGGAGGGGTCACGGATGAGCTCCTTGGGATCAATGAGCACTAACTCATCAAACACAACCGTATAGGTCACCCACCTGAAACTATAGCATCCTGTCCCACAATACACTAACTACAGGCTGACCTTTTTATACAACTTGTGTTCAGCTCACTAGCTAAAGTAGGGCACACTGTCCCAACCTGTAGACTTAGAGCATATTTCCTAACTGCCCTGTGGGTTTGCTTGGCGAACAGGAGATTCGGCTAAATACTTGCTACAATCAATTTAGCTTTCAGTCTCCTGTCTTGCTGTGTACTTGAAGAGTTATGAGATAAATGGAAATGAATTCCTTTATTCAGAATTGGAGCCCGTACTATATATgaatgtgattttctttttttaaagggttaCTTGAATGCTAAAGCCAACTAACTTCAGATGATTGTTAATGTATGGAGAACTATACCATCGCACTATGCAGTTAAGGGGGTACTAATGTAGTCATcttgcagactgaggaaaagaCAAACATGCTTCAGATGAGAAAATGCCCGCTATATGTGGTGCTGGCCACCAACTGCTTTGTAAGCATCAAAGATTAGTCAcctatgattttctttttactaAAATGGAACAAGCCCATCATGTAAAGCTGTGAAAATCCTTTAAACCATATTAAGTGTCAACCTCTGAGGTGCTGCAACAACAAATCCTACACAAGAAATTCAGGACTAGTGTATTTATCATGTATTTTCTATACTTTAAAGTGTGATTTGACTTCCTCCCTGGCAGCATGCTCTAAATGAAAACTGGCAGGCCTTATTATTCACTGAATATCTTGAATCATATTTGTTAGTAAGAAATAAAGTCTATGAAGTTGTACAGTTGTAATGTTAACAATGAATTAACACCAGCTTCTGATCCAAATGTCAGATCCAGGTTAAGCTTTCATACTGTACCTGACAATTGTAACTTGAGAATCTTAATTACTTGTAGCATTGTAGTCGATATATTTAATCATGGATGTTTTCAGGCTGTTTTAGTGTTAATGGAAGTTCAGAGTGAAGAGCGCTTTAGAAGCAGgtcttttctttctgtccaACCTTTTGGAGTCTTAAGTTAAACTGCACTAGTTTCACAACTTGAAATGGCTGTTGATTGCCTTGTCACTCTGTATGTTTGCAATAACACTAAAGAGGCATTCTGTTACAATGGTTTTGCCATTTGTGATCTATAGATGTCGTCAAAGCGCTTTGATTTTCATTTGCAGTGGATGATTCTCTTAGATTGCTGATCTCAAAGGAGTGTCATTTATATGATAAGTACAATCAAAAGTAGCATAGAGACTACATATGTGgtgttatgtttgtgtgtaaatgaaaAGTGAGGAAGGCATTATGAATTTTCAGGAATTTAAGGAGTTACAAAGAAATGCCTTTTTgttgtgaataaataaattcttTTTCTAAGA

Function

symbol description
hook1 Predicted to enable dynein light intermediate chain binding activity and microtubule binding activity. Predicted to be involved in several processes, including cytoplasmic microtubule organization; early endosome to late endosome transport; and endosome to lysosome transport. Predicted to act upstream of or within protein transport. Predicted to be located in microtubule. Predicted to be part of FHF complex. Predicted to be active in centrosome and cytoplasm. Orthologous to human HOOK1 (hook microtubule tethering protein 1).

NR:

description
protein Hook homolog 1-like

GO: NA

KEGG:

id description
K16612 HOOK1; protein HOOK1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810539.1 True 3941 mRNA 0.46 22 28565474 28578058

Neighbor

gene id symbol gene type direction distance location
LOC120565131 LOC101157528 coding downstream 90916 28469662 ~ 28474558 (-)
LOC120565125 NA coding downstream 219631 28318230 ~ 28345843 (-)
il23r NA coding downstream 258243 28295867 ~ 28307231 (-)
il12rb2 NA coding downstream 276441 28275654 ~ 28289033 (-)
ubxn6 ubxn6,LOC102799301 coding downstream 361052 28196965 ~ 28204422 (-)
pfas pfas coding upstream 7509 28585567 ~ 28599370 (-)
LOC120565212 LOC103354179 coding upstream 71817 28649875 ~ 28660129 (-)
LOC120566211 LOC104943485,LOC101073631,LOC103354190,LOC102792080 coding upstream 109388 28687446 ~ 28705450 (-)
LOC120564929 NA coding upstream 147195 28725253 ~ 28732165 (-)
zyg11 zyg11b coding upstream 176993 28755051 ~ 28772333 (-)
G98962 NA non-coding downstream 290044 28274080 ~ 28275430 (-)
LOC120564868 NA non-coding downstream 446113 28114564 ~ 28119361 (-)
G98908 NA non-coding downstream 464145 28097291 ~ 28101329 (-)
G98903 NA non-coding downstream 474891 28088449 ~ 28090583 (-)
G98852 NA non-coding downstream 538234 28025703 ~ 28027240 (-)
G99130 NA non-coding upstream 166710 28744768 ~ 28745193 (-)
G99134 NA non-coding upstream 171044 28749102 ~ 28751800 (-)
G99161 NA non-coding upstream 278211 28856269 ~ 28857558 (-)
G99165 NA non-coding upstream 288535 28866593 ~ 28866798 (-)
G99204 LOC106574201,LOC101065544 non-coding upstream 375244 28953302 ~ 28955846 (-)
G98938 serbp1,LOC102303841,LOC104930792,LOC105932454,LOC103463733,LOC106917776 other downstream 295749 28199362 ~ 28269725 (-)
G98781 NA other downstream 737167 27825065 ~ 27828307 (-)
G98777 NA other downstream 834917 27729681 ~ 27730557 (-)
LOC120565230 nr2c2ap,LOC102799158 other downstream 946588 27615442 ~ 27618886 (-)
mef2b mef2b,LOC104918762 other downstream 958168 27586440 ~ 27607306 (-)
LOC120565123 ipo13,LOC103354180,LOC102296374,LOC100704490,LOC101476741,LOC104925999,LOC102781747,LOC102197282 other upstream 23274 28601332 ~ 28637079 (-)
atg4b atg4b,atg4a other upstream 388348 28966406 ~ 28978444 (-)
LOC120566080 LOC103369405 other upstream 893514 29471572 ~ 29573160 (-)
G99324 lrrc8c other upstream 1175167 29753225 ~ 29758214 (-)
znf644b LOC102209721 other upstream 1461865 30039923 ~ 30078079 (-)

Expression


Co-expression Network