LOC120566211 (LOC104943485,LOC101073631,LOC103354190,LOC102792080)


Basic Information

Item Value
gene id LOC120566211
gene name LOC104943485,LOC101073631,LOC103354190,LOC102792080
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28687446 ~ 28705450 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812532.1
GTATACAGAGCGGTGTGAGCGCAGTGGAAGGACGCGCTTTCCATCGCGCTCCTGAGAAAAACCCCGACTTGTCTGCTGGACAGCGGCGTACGacagacagacccacacacactcagaccaACAACAGTCAAGGACATATGTGAGCGCGGCGCGTTTCCGCGGGGAGTCTACATCCAGGATTCAGGAATTGTGCGCAGGTCACGGCATATTTGTTtagaaactaaataaacaatGCACTCTGCTGGCGACAACTAATTCACAAAGATGAGTCACCGAGGGGGTGATCGACAACATCCAGTGGTTCTGGGGTCTTCTCATGCGGGACAAAGTCCGGTAAGCTGGGCCATTCTCACCCACAGAGCGATAAGCGTTTCTCGGTCACCTTCTGAAATGATGTCTTGTGGCGACGTTCGTTGCGCGCCAGAGTGCGTGTGAGTGACTGACCGATAGTCTttctgaaagagaaagagaggctgGATATAAACAGCAGCCAGGCTTGTAGGCAGCGACAGCCATACACTCAGAGCAGCCATCTCGCCTCTGTCACAGCTCCTCAGACCCATGCAGGATGCCCGGAAAGCGCCGGGGAGTCCTGGTCCAGCTCAGCCCGAGTTCATGACGCTCTGGGCGGCCTCGTCATGCGTCTCTTGCCCGAGCCCAGCGCCCAGTCCCTCcggctcctcttcctctttatcTTCGTGATGGGGGTGACCCCTTCCCCGGCTCTCACAGCCGGCTGCCCCGACAGATGCGTGTGCGACGACCAGCTGGTGGTCCAGTGCGCCGGGCAGGAGCTCACCATGTTCCCCAATGACCTGCCCCTGGCAACACGGCAGCTCATCATCTCCAACAACCGCATCGGGGAACTCCCGGCGCTTCAGCTCAACTACCTGTCCGATCTGGTCTATCTGGACTGCAGCAACAACTCTCTGACCGAGATCTCCGAGTCCACCTTCGGGAATTTGCGGAAACTCGCCTACCTGGACCTGTCGTTCAACACCCTGCTGCAGATCGAGGACCGTACTTTCGGGCCCCTGGCGTCTCTGGTGATGCTTCGGCTGACGGATAACCCGAGTCTGGGGGAGATCCACCCGGATGCCTTCTCGGAGAACATGGCTCTGCAGGTGTTGGATGTGAGCCGGAACAACCTGACGGCCCTCAACATCAGCAGCCTGATCGCCCTGCCTTCTCTGCGCTCGCTGGGGCTCAGCGGCAACCCCTGGAGCTGCGACTGTGACACGGAGGACCTCTGCCTCTGGGTGCAGATCGAGGGCTTCAAGTTCCAAGACGAGGGCCAGACAGTTTGCCACAGTCCCCCAGAGCTGGCGGGCCAGCGGATGGCGGAGGTCGGCATGCAGCTGCGGGCGGACTGCCACCAAGGCCTGGGCTACTGGGACTACCTGTTCTTCATCGCCATCGGCTTCGTCATCTTCTCGGCCGGCACGGTGTCGGCCTGGGTGATGGGCGTGCTCATGGTGCTGTACGAGCGCTACAGCAAAAGGAAGAGTGAGGACATGGACAGcgatgatgaggaggagagaaatgGGATGGGCGGAGGAggatgtggaggaggagggggaaacCAGGGGAACGGGGATGTGAGCAAGTCTGGCATGCAGGTGTGACAGACAGGTGTAAAACAACATGAGGAGGGATGACATGAGACCAGCAGAggagaaaagacagagagggaagaaCCAGAGGTGATGAGACCACTCTGAGACCAAATGCTCTGCAATGAACCAAGACCTGACTGTCTCTCTTTGTTACAGATTTAGATATCGCAATATGCTCTTCACCATATTGgacagaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaagaaagagagacagacagagacagcaaTAAGGATGACTATGCCTTTACTTCAG

Function

NR:

description
PREDICTED: leucine-rich repeat-containing protein 52-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812532.1 True 1974 mRNA 0.57 2 28687446 28705450

Neighbor

gene id symbol gene type direction distance location
LOC120565212 LOC103354179 coding downstream 27317 28649875 ~ 28660129 (-)
pfas pfas coding downstream 88076 28585567 ~ 28599370 (-)
hook1 hook1,LOC102781169 coding downstream 109388 28565474 ~ 28578058 (-)
LOC120565131 LOC101157528 coding downstream 212888 28469662 ~ 28474558 (-)
LOC120565125 NA coding downstream 341603 28318230 ~ 28345843 (-)
LOC120564929 NA coding upstream 19803 28725253 ~ 28732165 (-)
zyg11 zyg11b coding upstream 49601 28755051 ~ 28772333 (-)
angptl1a angptl1 coding upstream 131132 28836582 ~ 28853587 (-)
boka bok,LOC103374845 coding upstream 274323 28979773 ~ 28991591 (-)
farp2 farp2 coding upstream 296074 29001524 ~ 29039529 (-)
G98962 NA non-coding downstream 412016 28274080 ~ 28275430 (-)
LOC120564868 NA non-coding downstream 568085 28114564 ~ 28119361 (-)
G98908 NA non-coding downstream 586117 28097291 ~ 28101329 (-)
G98903 NA non-coding downstream 596863 28088449 ~ 28090583 (-)
G98852 NA non-coding downstream 660206 28025703 ~ 28027240 (-)
G99130 NA non-coding upstream 39318 28744768 ~ 28745193 (-)
G99134 NA non-coding upstream 43652 28749102 ~ 28751800 (-)
G99161 NA non-coding upstream 150819 28856269 ~ 28857558 (-)
G99165 NA non-coding upstream 161143 28866593 ~ 28866798 (-)
G99204 LOC106574201,LOC101065544 non-coding upstream 247852 28953302 ~ 28955846 (-)
LOC120565123 ipo13,LOC103354180,LOC102296374,LOC100704490,LOC101476741,LOC104925999,LOC102781747,LOC102197282 other downstream 50367 28601332 ~ 28637079 (-)
G98938 serbp1,LOC102303841,LOC104930792,LOC105932454,LOC103463733,LOC106917776 other downstream 417721 28199362 ~ 28269725 (-)
G98781 NA other downstream 859139 27825065 ~ 27828307 (-)
G98777 NA other downstream 956889 27729681 ~ 27730557 (-)
LOC120565230 nr2c2ap,LOC102799158 other downstream 1068560 27615442 ~ 27618886 (-)
atg4b atg4b,atg4a other upstream 260956 28966406 ~ 28978444 (-)
LOC120566080 LOC103369405 other upstream 766122 29471572 ~ 29573160 (-)
G99324 lrrc8c other upstream 1047775 29753225 ~ 29758214 (-)
znf644b LOC102209721 other upstream 1334473 30039923 ~ 30078079 (-)
tgfbr3 tgfbr3 other upstream 1401319 30106769 ~ 30191850 (-)

Expression


Co-expression Network