G124819


Basic Information

Item Value
gene id G124819
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 17736110 ~ 17736986 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU167865
caatatgttaattaatgcatcaattaaggtaTTTCAATCATCAtaatttctgatttattaatgatgttcatgtGTTCTTCAAAGGTATATAGTTAAAGTGACATGCTAAAGAAACTGAATTGTAGTGTTGTAACCATGATTAACTTAAagaggcgctatgcagttttggccatttcttcgctgttttctcgctctttgctcgcaggtttctctatagagctccccctacaccttcggaatagatatttgtcagctcctatgtttacttgtgtctgactcctcactCGGTTAggctgccgtttcctctttctctgttcctcctacaatgctttcctagctttctgcttcttttttgccggatcagccatgacgatagtgtgaaaaactccatcgctaccttgttagccggttcctgaactGGCGTATGTGTgtagtgccgtgaagcaattcgttacatcgcgagacctgatatcacgcgatacttcctgacgccgAGGCCGGCGACTCGccggccgaaagttgcaagggtgttttttgcgctcacaggcgctagggggaagtgAGACGACCaacattcaacccgaaaaaagtcatataaccattccactgactccgaagctgttcagttaaggtaaattaagataaacaaactgcatagttcccctttaacattacttcttcattacttcttcatgtttgtggcccttcaaataaagtgctgacctCCTCCATCTTTAACATTGACAAATAAGATGATTAATTAATGGTAACATGATGAAGTAATGaagaagtaatgtttagttaacaATGATTACAACACTACAATTTATCAGAATATATGTACACCGCTGTGTCTGGTCAGTTTTTTGAAgacgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167865 True 877 lncRNA 0.41 1 17736110 17736986

Neighbor

gene id symbol gene type direction distance location
scrn3 scrn3,LOC102796247 coding upstream 87858 17643338 ~ 17648252 (+)
sp9 sp9 coding upstream 101171 17632728 ~ 17634939 (+)
cdca7a cdca7 coding upstream 203854 17527950 ~ 17532256 (+)
zak LOC104965553 coding upstream 209406 17501695 ~ 17526704 (+)
rapgef4a rapgef4,LOC101483582 coding upstream 238026 17465228 ~ 17498084 (+)
hoxd12a hoxd12 coding downstream 130876 17867862 ~ 17870159 (+)
hoxd11a hoxd11 coding downstream 136696 17873682 ~ 17878153 (+)
hoxd9a hoxd9,LOC100697606,LOC102311238,LOC101477388,LOC102193136,LOC102792463 coding downstream 145480 17882466 ~ 17884616 (+)
hoxd4a hoxd4 coding downstream 159026 17896012 ~ 17899698 (+)
hoxd3a hoxd3 coding downstream 164093 17901079 ~ 17909596 (+)
G124816 atp5g3,LOC102234286 non-coding upstream 2859 17730056 ~ 17733251 (+)
G124804 NA non-coding upstream 48296 17687571 ~ 17687814 (+)
G124797 chn1,LOC102233772 non-coding upstream 61655 17672255 ~ 17674455 (+)
G124794 chrna1 non-coding upstream 70035 17664672 ~ 17666075 (+)
LOC120569550 NA non-coding upstream 122043 17605145 ~ 17614067 (+)
G124834 NA non-coding downstream 97233 17834219 ~ 17836226 (+)
G124841 hoxd12,hoxd10,LOC108239741,LOC107579206 non-coding downstream 123767 17860753 ~ 17881505 (+)
G124895 NA non-coding downstream 352239 18089225 ~ 18089543 (+)
G124901 NA non-coding downstream 392265 18129251 ~ 18182236 (+)
G124914 adam23 non-coding downstream 450432 18187418 ~ 18188518 (+)
myo3b myo3b other upstream 537520 17127881 ~ 17198590 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other upstream 712550 16988071 ~ 17023560 (+)
dap1b dapl1 other upstream 1634468 16099271 ~ 16101642 (+)
LOC120570321 NA other upstream 1758236 15970982 ~ 15977874 (+)
galnt13 galnt13,LOC102796746 other upstream 2075096 15618514 ~ 15661014 (+)
hoxd10a hoxd10,LOC102792757 other downstream 123174 17860160 ~ 17881328 (+)
hnrnpa3 hnrnpa3 other downstream 273771 18010757 ~ 18017413 (+)
G125079 NA other downstream 966042 18703028 ~ 18704528 (+)
LOC120570507 NA other downstream 1081767 18818753 ~ 18827547 (+)
tmsb4x NA other downstream 1352432 19089418 ~ 19090785 (+)

Expression


Co-expression Network